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GEMIN5 and SNRPF
Number of citations of the paper that reports this interaction (PubMedID
35271311
)
106
Data Source:
BioGRID
(affinity chromatography technology, pull down, affinity chromatography technology, affinity chromatography technology)
GEMIN5
SNRPF
Description
gem nuclear organelle associated protein 5
small nuclear ribonucleoprotein polypeptide F
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Membrane
Nuclear Body
SMN Complex
SMN-Gemin2 Complex
SMN-Sm Protein Complex
Gemini Of Cajal Bodies
Nucleus
Nucleoplasm
Spliceosomal Complex
U5 SnRNP
U7 SnRNP
U2-type Spliceosomal Complex
U1 SnRNP
U2 SnRNP
U4 SnRNP
U12-type Spliceosomal Complex
Cytoplasm
Cytosol
Small Nuclear Ribonucleoprotein Complex
Methylosome
PICln-Sm Protein Complex
SMN-Sm Protein Complex
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
Ribonucleoprotein Complex
Molecular Function
RNA 7-methylguanosine Cap Binding
RNA Binding
MRNA 3'-UTR Binding
Protein Binding
SnRNA Binding
U1 SnRNA Binding
U4 SnRNA Binding
U4atac SnRNA Binding
Ribosome Binding
RNA Binding
Protein Binding
Biological Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
MRNA Processing
Translation
Regulation Of Translation
RNA Splicing
Protein-containing Complex Assembly
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Protein-RNA Complex Assembly
7-methylguanosine Cap Hypermethylation
U2-type Prespliceosome Assembly
Pathways
snRNP Assembly
SARS-CoV-2 modulates host translation machinery
SLBP independent Processing of Histone Pre-mRNAs
snRNP Assembly
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
RNA Polymerase II Transcription Termination
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
SARS-CoV-2 modulates host translation machinery
Drugs
Diseases
GWAS
Venous thromboembolism (
32232851
)
Chronic obstructive pulmonary disease (
30804561
)
Lung function (FEV1/FVC) (
30804560
)
Peak expiratory flow (
30804560
)
Refractive error (
32231278
)
Vitamin C levels (
33203707
)
Interacting Genes
22 interacting genes:
CLK1
DDX20
EIF4E
GEMIN2
GEMIN4
MAP2K4
MAP3K5
MAPK8
RN7SL1
RNF10
RNU1-1
RNU2-1
SMN1
SNRPB
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNRPF
SNRPG
STXBP3
SUMO2
30 interacting genes:
CEBPA
COIL
CPSF7
DDX20
FOXP1
GEMIN5
GEMIN6
HOMER3
HSPB1
IKZF1
IL7R
LNX1
LSM3
LSM5
LSM6
LSM7
MEOX2
OSBPL2
POLDIP3
PRPF6
PSMA3
PUF60
RPL9
SMN2
SNRPD2
SNRPE
SNRPG
SRRT
SRSF5
WDR77
Entrez ID
25929
6636
HPRD ID
06109
04645
Ensembl ID
ENSG00000082516
ENSG00000139343
Uniprot IDs
B7ZLC9
Q58EZ8
Q8TEQ6
P62306
PDB IDs
5GXH
5GXI
5H1J
5H1K
5H1L
5H1M
5H3S
5H3T
5H3U
5TEE
5TEF
5THA
6RNQ
6RNS
7XDT
7XGR
3CW1
3JCR
3PGW
4F7U
4PJO
4V98
4WZJ
5MQF
5O9Z
5XJC
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
5YZG
5Z56
5Z57
5Z58
6AH0
6FF7
6ICZ
6ID0
6ID1
6QDV
6QW6
6QX9
6V4X
6Y53
6Y5Q
7A5P
7ABG
7ABI
7B0Y
7DVQ
7EVO
7QTT
7VPX
7W59
7W5A
7W5B
8C6J
8CH6
8H6E
8H6J
8H6K
8H6L
8HK1
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8I0W
8Q7Q
8Q7V
8Q7W
8Q7X
8Q91
8QO9
8QXD
8QZS
8R08
8R09
8R0A
8R0B
8R7N
8RC0
8RM5
8RO2
8Y6O
8Y7E
9FMD
9GBW
9GC0
9GCL
Enriched GO Terms of Interacting Partners
?
SMN-Sm Protein Complex
Spliceosomal SnRNP Assembly
7-methylguanosine Cap Hypermethylation
Small Nuclear Ribonucleoprotein Complex
U4 SnRNP
Methylosome
Spliceosomal Complex Assembly
U2 SnRNP
Protein-RNA Complex Assembly
U1 SnRNP
U5 SnRNP
U2-type Prespliceosome Assembly
U12-type Spliceosomal Complex
U2-type Spliceosomal Complex
U2-type Catalytic Step 2 Spliceosome
PICln-Sm Protein Complex
U7 SnRNP
U4/U6 X U5 Tri-snRNP Complex
U2-type Precatalytic Spliceosome
RNA Splicing
MRNA Processing
RNA Splicing, Via Transesterification Reactions
RNA Methylation
Catalytic Step 2 Spliceosome
Precatalytic Spliceosome
Spliceosomal Complex
Protein-containing Complex Assembly
Macromolecule Methylation
MRNA Metabolic Process
Protein-containing Complex Organization
SMN Complex
Gemini Of Cajal Bodies
RNA Modification
RNA Processing
MRNA Splicing, Via Spliceosome
Methylation
Spliceosomal Tri-snRNP Complex
Cellular Component Assembly
Ribonucleoprotein Complex
RNA Metabolic Process
Telomerase Holoenzyme Complex
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Metabolic Process
Nuclear Body
Histone Pre-mRNA DCP Binding
RNA Binding
Commitment Complex
U1 SnRNP Binding
JNK Cascade
Cytosol
Spliceosomal SnRNP Assembly
RNA Splicing, Via Transesterification Reactions
MRNA Processing
RNA Splicing
Protein-RNA Complex Assembly
SMN-Sm Protein Complex
U4/U6 X U5 Tri-snRNP Complex
MRNA Metabolic Process
U2-type Precatalytic Spliceosome
MRNA Splicing, Via Spliceosome
RNA Processing
RNA Binding
Nucleoplasm
Spliceosomal Complex Assembly
RNA Metabolic Process
Lsm2-8 Complex
Ribonucleoprotein Complex
Spliceosomal Complex
U6 SnRNP
SMN Complex
Gemini Of Cajal Bodies
Methylosome
Protein-containing Complex Assembly
Catalytic Step 2 Spliceosome
Nucleus
Small Nuclear Ribonucleoprotein Complex
Precatalytic Spliceosome
Protein-containing Complex Organization
U5 SnRNP
Lsm1-7-Pat1 Complex
Nucleic Acid Metabolic Process
U12-type Spliceosomal Complex
7-methylguanosine Cap Hypermethylation
U4 SnRNP
Nucleobase-containing Compound Metabolic Process
Cellular Component Assembly
U1 SnRNP
Macromolecule Metabolic Process
Cytosol
U2-type Prespliceosome Assembly
U2 SnRNP
U2-type Spliceosomal Complex
U2-type Catalytic Step 2 Spliceosome
Nuclear Body
PICln-Sm Protein Complex
Spliceosomal Tri-snRNP Complex
U7 SnRNP
Regulation Of Gene Expression
U1 SnRNA Binding
Regulation Of Macromolecule Biosynthetic Process
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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