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SNRPF and COIL
Number of citations of the paper that reports this interaction (PMID
25416956
)
0
Data Source:
BioGRID
(two hybrid)
SNRPF
COIL
Gene Name
small nuclear ribonucleoprotein polypeptide F
coilin
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleoplasm
Spliceosomal Complex
U7 SnRNP
U1 SnRNP
U4 SnRNP
U12-type Spliceosomal Complex
Cytosol
Small Nuclear Ribonucleoprotein Complex
Methylosome
PICln-Sm Protein Complex
SMN-Sm Protein Complex
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Cajal Body
Membrane
Molecular Function
RNA Binding
Protein Binding
Protein Binding
Protein C-terminus Binding
Identical Protein Binding
Biological Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Transcription From RNA Polymerase II Promoter
Termination Of RNA Polymerase II Transcription
Histone MRNA Metabolic Process
RNA Splicing
Gene Expression
MRNA 3'-end Processing
NcRNA Metabolic Process
Pathways
mRNA Splicing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription
Metabolism of non-coding RNA
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Cleavage of Growing Transcript in the Termination Region
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
snRNP Assembly
Processing of Capped Intronless Pre-mRNA
SLBP independent Processing of Histone Pre-mRNAs
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Height (
18391951
)
Protein-Protein Interactions
22 interactors:
CLNS1A
COIL
DDX20
GEMIN5
GEMIN6
HOMER3
IKZF1
IL7R
LNX1
LSM5
LSM6
LSM7
PSMA3
PUF60
SMN2
SNRPA1
SNRPD2
SNRPE
SNRPG
SRRT
SRSF5
WDR77
70 interactors:
ACTN1
ACTN2
ACTN4
APP
ARMCX1
ATXN1
ATXN1L
BYSL
C1QBP
CCDC136
CCDC159
CCNE1
CDC23
CDK2
CEP70
CEP76
CSNK2B
CYB5R2
DHX16
DNAJA3
DRG1
FGF12
FHL5
FXR2
GCC1
KALRN
KAZN
KLC2
KLC4
KLHL42
KLHL8
KPNA3
LNX1
MAD1L1
MFAP1
MYO5B
NIF3L1
NOLC1
NUDT18
PDE4D
PDLIM5
PIAS4
PICK1
PLEKHG4
POLR2L
PREPL
PRMT1
PRMT8
PSMA1
PSME3
PTS
SART3
SCYL1
SMN1
SNRPB
SNRPF
SNX6
TAF9
TCAF1
TCEB3B
TFCP2
TGS1
TSPYL2
WDR34
WDYHV1
XRCC5
XRCC6
ZBTB25
ZCCHC10
ZNF277
Entrez ID
6636
8161
HPRD ID
04645
02605
Ensembl ID
ENSG00000121058
Uniprot IDs
P62306
P38432
PDB IDs
1VU2
1VU3
2Y9A
2Y9B
2Y9C
2Y9D
3CW1
3PGW
3S6N
4F77
Enriched GO Terms of Interacting Partners
?
RNA Splicing
RNA Processing
MRNA Processing
MRNA Metabolic Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Ribonucleoprotein Complex Assembly
Ribonucleoprotein Complex Biogenesis
NcRNA Metabolic Process
Gene Expression
RNA Metabolic Process
Spliceosomal Complex Assembly
Cellular Macromolecular Complex Assembly
Cellular Nitrogen Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Component Assembly
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Termination Of RNA Polymerase II Transcription
Cellular Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
DNA-templated Transcription, Termination
MRNA 3'-end Processing
Lymph Node Development
RNA 3'-end Processing
Histone MRNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
RNA Catabolic Process
Cellular Macromolecule Catabolic Process
Positive Regulation Of Neutrophil Differentiation
Metabolic Process
Interleukin-7-mediated Signaling Pathway
Cellular Process
Positive Regulation Of T Cell Differentiation
Positive Regulation Of Lymphocyte Differentiation
Secretory Columnal Luminar Epithelial Cell Differentiation Involved In Prostate Glandular Acinus Development
Negative Regulation Of T Cell Mediated Cytotoxicity
Primary MiRNA Processing
Regulation Of T Cell Differentiation
Positive Regulation Of NK T Cell Differentiation
Aromatic Compound Catabolic Process
Positive Regulation Of Granulocyte Differentiation
T Cell Differentiation
Regulation Of Lymphocyte Differentiation
B Cell Activation
Cellular Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Spliceosomal SnRNP Assembly
Nitrogen Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
RNA Metabolic Process
Regulation Of Metabolic Process
MRNA Processing
Ribonucleoprotein Complex Biogenesis
RNA Processing
Regulation Of Nitrogen Compound Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Mitotic Cell Cycle
RNA Splicing
Gene Expression
Mitotic Cell Cycle Phase Transition
Cell Cycle Phase Transition
Ribonucleoprotein Complex Assembly
Regulation Of Nucleic Acid-templated Transcription
Regulation Of RNA Biosynthetic Process
Cellular Hyperosmotic Salinity Response
Protein Localization To Tight Junction
Regulation Of Cellular Protein Metabolic Process
Mitotic Cell Cycle Process
Regulation Of RNA Metabolic Process
MRNA Metabolic Process
Transcription, DNA-templated
Regulation Of Mitotic Cell Cycle Phase Transition
Negative Regulation Of Cellular Metabolic Process
Positive Regulation Of Cellular Metabolic Process
Cellular Metabolic Process
Regulation Of Ubiquitin-protein Ligase Activity Involved In Mitotic Cell Cycle
Regulation Of Cell Cycle Phase Transition
RNA Biosynthetic Process
Negative Regulation Of Mitotic Cell Cycle Phase Transition
Regulation Of Cell Cycle Process
Regulation Of Protein Metabolic Process
Platelet Degranulation
Anaphase-promoting Complex-dependent Proteasomal Ubiquitin-dependent Protein Catabolic Process
Cellular Macromolecular Complex Assembly
Negative Regulation Of Cellular Protein Metabolic Process
Mitotic Cell Cycle Checkpoint
DNA Damage Response, Signal Transduction By P53 Class Mediator
Regulation Of Gene Expression
Cellular Response To X-ray
Regulation Of Ubiquitin-protein Transferase Activity
Viral Process
Cellular Component Assembly
Tagcloud
?
augment
augments
bait
cbp
coactivator
coiled
enhances
except
hybrid
ifngamma
instead
interactor
interacts
interestingly
intrinsic
lacks
myc
nmi
potentiate
recruitment
reveal
screen
stat
stat1
stat2
stat5
stat5b
stats
yeast
Tagcloud (Difference)
?
augment
augments
bait
cbp
coactivator
coiled
enhances
except
hybrid
ifngamma
instead
interactor
interacts
interestingly
intrinsic
lacks
myc
nmi
potentiate
recruitment
reveal
screen
stat
stat1
stat2
stat5
stat5b
stats
yeast
Tagcloud (Intersection)
?