AKAP13 and LINC00839

Number of citations of the paper that reports this interaction (PubMedID 30631154)
76

Data Source:
BioGRID (unspecified method)

		AKAP13	LINC00839
Description		A-kinase anchoring protein 13	long intergenic non-protein coding RNA 839
Image			No pdb structure
GO Annotations	Cellular Component	Nucleus Cytoplasm Cytosol Cell Cortex Actin Cytoskeleton Membrane Cortical Actin Cytoskeleton
	Molecular Function	MAP-kinase Scaffold Activity Guanyl-nucleotide Exchange Factor Activity Protein Binding Zinc Ion Binding Small GTPase Binding Metal Ion Binding Protein Kinase A Binding Molecular Adaptor Activity
	Biological Process	MAPK Cascade G Protein-coupled Receptor Signaling Pathway Heart Development Regulation Of Rho Protein Signal Transduction Positive Regulation Of Rho Protein Signal Transduction Positive Regulation Of Canonical NF-kappaB Signal Transduction Regulation Of Small GTPase Mediated Signal Transduction Cardiac Muscle Cell Differentiation Regulation Of Sarcomere Organization Bone Development Adrenergic Receptor Signaling Pathway Regulation Of Intracellular Signal Transduction
Pathways		NRAGE signals death through JNK G alpha (12/13) signalling events RHOA GTPase cycle RHOB GTPase cycle RHOC GTPase cycle
Drugs
Diseases
GWAS		A body shape index ( 34021172) Birth weight ( 31043758) Central corneal thickness ( 20719862 32528159 31798171 29760442) Corneal structure ( 23291589) Coronary artery disease ( 29212778) Granulocyte percentage of myeloid white cells ( 27863252) Hemoglobin ( 32888494) High myopia ( 32428537) Idiopathic pulmonary fibrosis ( 31710517 29066090) Immature fraction of reticulocytes ( 32888494) Intraocular pressure ( 29617998) Mean corpuscular hemoglobin ( 32888494) Mean corpuscular hemoglobin concentration ( 32888494) Mean corpuscular volume ( 27863252 32888494) Mean spheric corpuscular volume ( 32888494) Medication use (diuretics) ( 31015401) Metabolite levels ( 23823483) Monocyte count ( 32888494) Monocyte percentage of white cells ( 27863252 32888494) Multiple sclerosis ( 31604244) Neutrophil percentage of white cells ( 32888494) Offspring birth weight ( 31043758) Platelet count ( 32888494) Platelet distribution width ( 32888494) Post-bronchodilator lung function in asthma (FEV1/FVC) ( 32989782) Psoriasis ( 25939698) Pulse pressure ( 30578418) Red blood cell count ( 32888494) Refractive error ( 32231278) Response to platinum-based chemotherapy (carboplatin) ( 21844884) Systolic blood pressure ( 30578418) Waist circumference adjusted for body mass index ( 34021172)
Interacting Genes		21 interacting genes: APP CTNNAL1 ESR1 ESR2 GNA12 GNAQ LINC00839 MAP1LC3A PPARA PRKAR2A PRKD1 RANBP2 RHOA RTKN RXRB SRPK2 THRA YWHAB YWHAE YWHAG YWHAZ	82 interacting genes: ADAMTS15 AKAP13 ALDH16A1 APOL3 BFSP1 CALM1 CC2D1B CCDC93 CDC16 CEP192 CEP295NL CHPF CIZ1 CLGN CLPTM1 COPB1 DNAH10 DPEP3 EFL1 EID2 EMX1 FAAP100 FAM13B FBXL5 HAPLN4 IQCN IRX4 JAKMIP2 KLK14 KRT1 KRT6B L1CAM LRTM3 MEX3A MEX3B MEX3C MEX3D MICAL2 MYO7A NDUFA2 NOC4L NOTCH3 NVL OS9 P4HB PABPN1 PALM3 PARP6 PHACTR1 PKD1L2 PLOD3 PNPLA3 POMT2 PRSS1 PRSS3 PTBP1 PTEN PTPRA QSOX2 RAPGEF6 RIF1 RPLP2 RPTOR RYR2 SEMA4D SEPTIN12 SEPTIN9 SERHL2 SLC7A14 SOWAHB SREBF2 SYNE1 SYNE3 TAS1R3 TCF24 TMC4 TRO UBE2S VANGL1 YAP1 YIPF1 ZFPL1
Entrez ID		11214	84856
HPRD ID		05253	17516
Ensembl ID		ENSG00000170776	ENSG00000185904
Uniprot IDs		A8MYJ1 B0AZU4 Q12802
PDB IDs		2DRN 2LG1 4D0N 4D0O 6BCA
Enriched GO Terms of Interacting Partners?		Intracellular Signal Transduction Signal Transduction Intracellular Receptor Signaling Pathway Hormone-mediated Signaling Pathway Nuclear Receptor-mediated Signaling Pathway Nuclear Receptor Activity Protein Domain Specific Binding Nuclear Steroid Receptor Activity Intracellular Signaling Cassette Nuclear Receptor-mediated Steroid Hormone Signaling Pathway Steroid Hormone Receptor Signaling Pathway Phosphoserine Residue Binding Protein Sequestering Activity Cellular Response To Oxygen-containing Compound Focal Adhesion Regulation Of Intracellular Signal Transduction Regulation Of Signal Transduction Rho Protein Signal Transduction Cellular Response To Starvation Negative Regulation Of MiRNA Transcription Regulation Of Cell Communication Regulation Of Signaling Response To Starvation Response To Norepinephrine Cellular Response To Norepinephrine Stimulus Nuclear Estrogen Receptor Activity Cellular Response To Nutrient Levels Regulation Of Nucleocytoplasmic Transport Regulation Of Toll-like Receptor Signaling Pathway Negative Regulation Of Signal Transduction Negative Regulation Of Protein Localization To Nucleus Cytosol Negative Regulation Of Signaling Negative Regulation Of Cell Communication Regulation Of Protein Localization To Nucleus Regulation Of System Process Cellular Response To Amino Acid Starvation Positive Regulation Of Transcription By RNA Polymerase II Response To Amino Acid Starvation Regulation Of Biological Quality Estrogen Response Element Binding G Protein Activity G Protein-coupled Receptor Binding Enzyme Binding Protein Targeting Regulation Of MiRNA Transcription Regulation Of MiRNA Metabolic Process Regulation Of Apoptotic Process Regulation Of Innate Immune Response Adenylate Cyclase-modulating G Protein-coupled Receptor Signaling Pathway
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