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SYNCRIP and APOBEC1
Number of citations of the paper that reports this interaction (PubMedID
11352648
)
0
Data Source:
BioGRID
(pull down)
SYNCRIP
APOBEC1
Description
synaptotagmin binding cytoplasmic RNA interacting protein
apolipoprotein B mRNA editing enzyme catalytic subunit 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
Cytoplasm
Endoplasmic Reticulum
Cytosol
Membrane
MRNA Editing Complex
CRD-mediated MRNA Stability Complex
Catalytic Step 2 Spliceosome
Histone Pre-mRNA 3'end Processing Complex
GAIT Complex
MCRD-mediated MRNA Stability Complex
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytoplasm
Apolipoprotein B MRNA Editing Enzyme Complex
MRNA Editing Complex
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
MRNA 5'-UTR Binding
RNA Binding
Catalytic Activity
Cytidine Deaminase Activity
Protein Binding
Zinc Ion Binding
Hydrolase Activity
MRNA 3'-UTR AU-rich Region Binding
Metal Ion Binding
Biological Process
MRNA Splicing, Via Spliceosome
Osteoblast Differentiation
RNA Processing
MRNA Processing
Regulation Of Translation
RNA Splicing
MRNA Modification
Negative Regulation Of Translation
CRD-mediated MRNA Stabilization
Cellular Response To Type II Interferon
Chromosomal 5-methylcytosine DNA Demethylation Pathway
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Positive Regulation Of Cytoplasmic Translation
MRNA Processing
Lipid Metabolic Process
Triglyceride Metabolic Process
Response To Gamma Radiation
Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Macromolecule Metabolic Process
Cytidine To Uridine Editing
MRNA Modification
Low-density Lipoprotein Particle Clearance
Regulation Of Cell Population Proliferation
Lipoprotein Metabolic Process
Lipoprotein Biosynthetic Process
Lipoprotein Transport
Positive Regulation Of Gene Expression Via Chromosomal CpG Island Demethylation
MRNA Stabilization
Establishment Of Localization In Cell
Negative Regulation Of Triglyceride Metabolic Process
Chromosomal 5-methylcytosine DNA Demethylation Pathway
Regulation Of MRNA Metabolic Process
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Pathways
mRNA Editing: C to U Conversion
Formation of the Editosome
Drugs
Zinc chloride
Zinc sulfate, unspecified form
Diseases
GWAS
Body mass index (
28552196
)
Creatine kinase levels (
29403010
)
HDL cholesterol levels (
28334899
)
Interacting Genes
111 interacting genes:
A1CF
APOBEC1
APP
CEBPA
CIP2A
CSDE1
EPRS1
ESR1
FNDC3B
GRB2
HABP4
HMGA1
HMGA2
HNRNPD
HNRNPK
IL7R
INSR
IVNS1ABP
KLHL3
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
MYPOP
NUPR1
OGT
PABPC1
PCSK7
PLCG1
PRMT1
PTPN11
SMN1
SUMO2
SYT1
SYT11
SYT2
SYT3
SYT4
SYT7
SYT8
SYT9
TRIM55
TRIM63
16 interacting genes:
A1CF
APOBEC2
BAG4
CDK6
CELF2
DNAJB11
DND1
HNRNPF
HNRNPK
KPNA2
KRTAP19-5
KRTAP6-1
KRTAP6-2
NOTO
SYNCRIP
UFSP2
Entrez ID
10492
339
HPRD ID
06734
02531
Ensembl ID
ENSG00000135316
ENSG00000111701
Uniprot IDs
A0A7I2V309
A0A7I2YQN2
B7Z645
O60506
Q59GL1
P41238
PDB IDs
2DGU
2MXT
2NBB
6KOR
6X91
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Negative Regulation Of Biosynthetic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
MiRNA-mediated Gene Silencing By MRNA Destabilization
Extracellular Vesicle
Negative Regulation Of Translation
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
MRNA Destabilization
Positive Regulation Of MRNA Catabolic Process
Regulation Of Translation
RNA Destabilization
Regulation Of Macromolecule Metabolic Process
Positive Regulation Of MRNA Metabolic Process
Regulation Of MRNA Stability
Regulation Of Metabolic Process
Negative Regulation Of Cytokine Production
Regulation Of RNA Stability
Regulation Of Angiogenesis
Negative Regulation Of Cell Migration
Regulation Of Vasculature Development
Negative Regulation Of Vascular Endothelial Growth Factor Production
Negative Regulation Of Cell Motility
Negative Regulation Of Angiogenesis
Negative Regulation Of Vasculature Development
Negative Regulation Of Multicellular Organismal Process
Negative Regulation Of Locomotion
Regulation Of MRNA Metabolic Process
Negative Regulation Of Developmental Process
Negative Regulation Of Protein Metabolic Process
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Anatomical Structure Morphogenesis
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Regulation Of Endothelial Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Signaling
Negative Regulation Of Cell Communication
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of Cell Migration
MRNA Modification
Negative Regulation Of MRNA Metabolic Process
Regulation Of MRNA Metabolic Process
MRNA Metabolic Process
MRNA Processing
RNA Binding
MRNA Editing Complex
Chromosomal 5-methylcytosine DNA Demethylation Pathway
Nucleic Acid Binding
RNA Modification
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Cytidine To Uridine Editing
Negative Regulation Of MRNA Catabolic Process
Catalytic Step 2 Spliceosome
Regulation Of Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
RNA Processing
Negative Regulation Of RNA Catabolic Process
Base Conversion Or Substitution Editing
RNA Metabolic Process
Nucleic Acid Metabolic Process
Ribonucleoprotein Complex
Intermediate Filament
Spliceosomal Complex
Regulation Of RNA Splicing
Positive Regulation Of Gene Expression
Cyclin D2-CDK6 Complex
MRNA Splicing, Via Spliceosome
Single-stranded RNA Binding
Negative Regulation Of MRNA Modification
Nucleus
Regulation Of Macromolecule Metabolic Process
RNA Splicing, Via Transesterification Reactions
Regulation Of Gene Expression
Negative Regulation Of RNA Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Cyclin D3-CDK6 Complex
Cyclin D1-CDK6 Complex
FBXO Family Protein Binding
Nucleobase-containing Compound Metabolic Process
MRNA Binding
Entry Of Viral Genome Into Host Nucleus Through Nuclear Pore Complex Via Importin
MRNA Stabilization
DeUFMylase Activity
Regulation Of Primary Metabolic Process
Keratinization
Regulation Of RNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Metabolic Process
RNA Stabilization
MRNA Localization Resulting In Post-transcriptional Regulation Of Gene Expression
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Tagcloud (Intersection)
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