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CTDP1 and SNRPB
Number of citations of the paper that reports this interaction (PMID
12560496
)
4
Data Source:
HPRD
(in vivo)
CTDP1
SNRPB
Gene Name
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
small nuclear ribonucleoprotein polypeptides B and B1
Image
Gene Ontology Annotations
Cellular Component
Spindle Pole
Nucleoplasm
Cytoplasm
Centrosome
Spindle
Actin Cytoskeleton
Midbody
Spindle Midzone
Nucleoplasm
Spliceosomal Complex
U7 SnRNP
U1 SnRNP
U4 SnRNP
U12-type Spliceosomal Complex
Cytosol
Small Nuclear Ribonucleoprotein Complex
Methylosome
SMN-Sm Protein Complex
Extracellular Vesicular Exosome
Catalytic Step 2 Spliceosome
Histone Pre-mRNA 3'end Processing Complex
Molecular Function
DNA-directed RNA Polymerase Activity
CTD Phosphatase Activity
Protein Binding
Poly(A) RNA Binding
Histone Pre-mRNA DCP Binding
Biological Process
Transcription From RNA Polymerase II Promoter
Transcription Elongation From RNA Polymerase II Promoter
Protein Dephosphorylation
Exit From Mitosis
Gene Expression
Viral Process
Positive Regulation Of Viral Transcription
Cell Division
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Transcription From RNA Polymerase II Promoter
Termination Of RNA Polymerase II Transcription
Histone MRNA Metabolic Process
RNA Splicing
Gene Expression
MRNA 3'-end Processing
NcRNA Metabolic Process
Pathways
Formation of HIV-1 elongation complex containing HIV-1 Tat
RNA Polymerase II Transcription
Abortive elongation of HIV-1 transcript in the absence of Tat
HIV Infection
Formation of the Early Elongation Complex
Tat-mediated elongation of the HIV-1 transcript
Tat-mediated HIV elongation arrest and recovery
RNA Polymerase II Pre-transcription Events
Late Phase of HIV Life Cycle
Pausing and recovery of Tat-mediated HIV elongation
Formation of RNA Pol II elongation complex
HIV elongation arrest and recovery
HIV Life Cycle
Pausing and recovery of HIV elongation
Formation of HIV elongation complex in the absence of HIV Tat
Formation of the HIV-1 Early Elongation Complex
HIV Transcription Elongation
Transcription of the HIV genome
RNA Polymerase II Transcription Elongation
mRNA Splicing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription
Metabolism of non-coding RNA
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Cleavage of Growing Transcript in the Termination Region
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
snRNP Assembly
Processing of Capped Intronless Pre-mRNA
SLBP independent Processing of Histone Pre-mRNAs
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Schizophrenia (
23212062
)
Protein-Protein Interactions
42 interactors:
CDK7
CDK8
CDK9
CSNK2A1
CSNK2A2
CSNK2B
E2F1
ELP2
ELP3
ERH
GTF2F1
HIST1H4A
HIST2H2AC
INTS1
INTS3
INTS6
INTS7
INTS8
MED1
MED14
MED15
MED16
MED17
MED23
MED24
MED25
MED26
MED4
MED6
MED7
MED8
NDRG2
POLR2A
POLR2B
PRKDC
PRMT5
SNRNP70
SNRPB
STK38
TCEA1
UPP1
WDR77
48 interactors:
ASCC2
BANP
C14orf1
CALCOCO2
CD2BP2
CDKN2A
CEP55
CLNS1A
COIL
CTDP1
DAB1
DDX20
DHX9
FNBP4
GEMIN4
GEMIN5
GEMIN6
GEMIN7
GIGYF2
GOLGA2
IL7R
KRT40
L3MBTL3
LSM11
LSM2
LSM8
PNMA1
PRMT5
PRMT7
PSMA3
RBPMS
RFX6
SKIV2L
SMN1
SMN2
SMNDC1
SNRPD1
SNRPD3
SNUPN
SS18L1
STRAP
STXBP2
STXBP3
TFIP11
TOP3B
TRIM23
WBP4
WDR77
Entrez ID
9150
6628
HPRD ID
05377
01655
Ensembl ID
ENSG00000060069
ENSG00000125835
Uniprot IDs
Q9Y5B0
P14678
Q66K91
PDB IDs
1J2X
1ONV
2K7L
1D3B
2Y9A
2Y9B
2Y9C
2Y9D
3CW1
3PGW
Enriched GO Terms of Interacting Partners
?
Transcription Initiation From RNA Polymerase II Promoter
DNA-templated Transcription, Initiation
Nucleobase-containing Compound Metabolic Process
RNA Metabolic Process
Transcription From RNA Polymerase II Promoter
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
Transcription, DNA-templated
Gene Expression
RNA Biosynthetic Process
Regulation Of Transcription From RNA Polymerase II Promoter
Regulation Of RNA Metabolic Process
Transcription Elongation From RNA Polymerase II Promoter
Cellular Metabolic Process
Cellular Macromolecule Biosynthetic Process
Androgen Receptor Signaling Pathway
Regulation Of RNA Biosynthetic Process
Macromolecule Biosynthetic Process
Regulation Of Gene Expression
DNA-templated Transcription, Elongation
Regulation Of Nitrogen Compound Metabolic Process
Regulation Of Transcription, DNA-templated
Regulation Of Nucleic Acid-templated Transcription
Positive Regulation Of Gene Expression
Regulation Of Metabolic Process
Intracellular Steroid Hormone Receptor Signaling Pathway
Biosynthetic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Viral Transcription
NcRNA Metabolic Process
Positive Regulation Of Cellular Biosynthetic Process
SnRNA Processing
Regulation Of Viral Transcription
Positive Regulation Of Transcription, DNA-templated
Positive Regulation Of Viral Process
Stem Cell Maintenance
SnRNA Metabolic Process
Positive Regulation Of Cellular Metabolic Process
Metabolic Process
Intracellular Receptor Signaling Pathway
Positive Regulation Of Transcription From RNA Polymerase II Promoter
Cell Cycle Checkpoint
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Stem Cell Development
Positive Regulation Of Metabolic Process
7-methylguanosine MRNA Capping
Regulation Of Viral Process
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Splicing
MRNA Processing
RNA Processing
MRNA Metabolic Process
Ribonucleoprotein Complex Assembly
Ribonucleoprotein Complex Biogenesis
Gene Expression
RNA Metabolic Process
Cellular Macromolecular Complex Assembly
Nucleobase-containing Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
NcRNA Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Nitrogen Compound Metabolic Process
Cellular Component Assembly
Spliceosomal Complex Assembly
Cellular Metabolic Process
Peptidyl-arginine Methylation, To Symmetrical-dimethyl Arginine
Neutrophil Degranulation
Chromosome Organization
Histone H4-R3 Methylation
Neutrophil Activation Involved In Immune Response
Peptidyl-arginine N-methylation
Chromatin Organization
Spliceosomal Tri-snRNP Complex Assembly
Metabolic Process
Histone Arginine Methylation
Peptidyl-arginine Methylation
Regulation Of Mitotic Cell Cycle Phase Transition
Transcription, DNA-templated
Neutrophil Mediated Immunity
Histone MRNA Metabolic Process
Chromatin Modification
Neutrophil Activation
Regulation Of Cell Cycle Phase Transition
Regulation Of Mitotic Cell Cycle
Cellular Process
RNA Biosynthetic Process
Regulation Of T Cell Differentiation In Thymus
Regulation Of G1/S Transition Of Mitotic Cell Cycle
Regulation Of Cell Cycle G1/S Phase Transition
Regulation Of Cell Cycle Process
Pancreatic Epsilon Cell Differentiation
Cell-cell Adhesion Involved In Neuronal-glial Interactions Involved In Cerebral Cortex Radial Glia Guided Migration
SnRNA Import Into Nucleus
Spliceosomal Complex Disassembly
Tagcloud
?
13q14
18qtel
1p32
3p14
3q21
4q11
4q24
5p13
5p15
5ptel
8p23
9qtel
c84c11
cgh
d1s427
d5s23
d8s504
d9s325
dab2
dxs7132
faf1
fhit
genosensor
imbalances
q12
rbp1
rbp2
shgc
xq12
Tagcloud (Difference)
?
13q14
18qtel
1p32
3p14
3q21
4q11
4q24
5p13
5p15
5ptel
8p23
9qtel
c84c11
cgh
d1s427
d5s23
d8s504
d9s325
dab2
dxs7132
faf1
fhit
genosensor
imbalances
q12
rbp1
rbp2
shgc
xq12
Tagcloud (Intersection)
?