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RNF8 and CALCOCO1
Number of citations of the paper that reports this interaction (PubMedID
32296183
)
50
Data Source:
BioGRID
(two hybrid)
RNF8
CALCOCO1
Description
ring finger protein 8
calcium binding and coiled-coil domain 1
Image
No pdb structure
GO Annotations
Cellular Component
Ubiquitin Ligase Complex
Chromosome, Telomeric Region
Nucleus
Nucleoplasm
Chromosome
Cytoplasm
Cytosol
Midbody
Site Of Double-strand Break
Chromatin
Nucleus
Cytoplasm
Cytosol
Molecular Function
Chromatin Binding
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Transferase Activity
Ubiquitin Protein Ligase Binding
Histone Binding
Identical Protein Binding
Protein Homodimerization Activity
Ubiquitin Binding
Metal Ion Binding
Ubiquitin Protein Ligase Activity
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Chromatin Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Protein Binding
Beta-catenin Binding
Zinc Ion Binding
Sequence-specific DNA Binding
Metal Ion Binding
Biological Process
DNA Repair
Double-strand Break Repair
Double-strand Break Repair Via Nonhomologous End Joining
Chromatin Organization
Ubiquitin-dependent Protein Catabolic Process
DNA Damage Response
Response To Ionizing Radiation
Protein Ubiquitination
Negative Regulation Of Transcription Elongation By RNA Polymerase II
Sperm DNA Condensation
Interstrand Cross-link Repair
Epigenetic Regulation Of Gene Expression
Signal Transduction In Response To DNA Damage
Isotype Switching
Positive Regulation Of DNA Repair
Cell Division
Protein Autoubiquitination
Protein K63-linked Ubiquitination
Protein K48-linked Ubiquitination
Protein K6-linked Ubiquitination
DNA Repair-dependent Chromatin Remodeling
Positive Regulation Of Double-strand Break Repair Via Homologous Recombination
Protein Localization To Site Of Double-strand Break
Signal Transduction
Positive Regulation Of Gene Expression
Wnt Signaling Pathway
Nuclear Receptor-mediated Steroid Hormone Signaling Pathway
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Pathways
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Nonhomologous End-Joining (NHEJ)
Processing of DNA double-strand break ends
G2/M DNA damage checkpoint
Drugs
Diseases
GWAS
Acne (severe) (
24927181
)
Restless legs syndrome (
29029846
)
Panic disorder (
19165232
)
Toenail selenium levels (
25343990
)
Waist-to-hip ratio adjusted for BMI (
26426971
)
Waist-to-hip ratio adjusted for BMI (age >50) (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Interacting Genes
78 interacting genes:
AMOTL2
BLM
CALCOCO1
CATSPERT
CCDC14
CCDC50
CCDC85B
CEP44
CEP85
CFLAR
CHD4
CHEK2
CLK2
CLK3
DNM2
DNTTIP2
EPN2
EPN3
EXOSC2
FAM9B
FSD2
GPRASP2
H2AC20
H2AC4
H2AX
H2BC21
H2BC3
HOMEZ
JMJD1C
KDM4A
KIF24
KMT5A
KRTAP10-1
KRTAP10-8
KRTAP9-2
KRTAP9-8
LMO4
MAD1L1
MAGED1
MAPK1
MDC1
MDM2
NONO
PCYT1A
PGRMC2
PICK1
PNMA2
POLD4
RBFOX2
RECQL4
RXRA
RYBP
SCN3B
SEPTIN3
SH3GL3
STX11
SUMO2
SUMO3
TMEM79
TNIP1
TOMM20L
TRIM29
UBE2D1
UBE2D2
UBE2D3
UBE2E1
UBE2E2
UBE2E3
UBE2N
UBE2V2
UBE2W
VCP
WASL
XRN2
YEATS4
ZBTB10
ZNF346
ZNF496
37 interacting genes:
APP
APTX
ARNT
BFSP2
CEP19
CREBBP
CRYBA2
CTNNBL1
CWF19L2
CYTH3
DUSP13B
ENKD1
EP300
FAM161A
FOSL1
FXR1
GABARAPL1
GABARAPL2
GRIK2
IPP
ISOC1
KRT15
MAPK1
MYH6
NDC80
NEDD4
PCBD1
POLR2A
PRKAA2
RNF8
SH3GL3
SHANK3
SMURF1
SRPK2
TBC1D15
TBC1D17
ZMAT2
Entrez ID
9025
57658
HPRD ID
11521
13868
Ensembl ID
ENSG00000112130
ENSG00000012822
Uniprot IDs
O76064
Q9P1Z2
PDB IDs
2CSW
2PIE
4AYC
4ORH
4WHV
Enriched GO Terms of Interacting Partners
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Ubiquitin Conjugating Enzyme Activity
Nucleus
Protein Polyubiquitination
Nucleoplasm
DNA Damage Response
DNA Repair
Protein Modification By Small Protein Conjugation
Protein Monoubiquitination
Protein Ubiquitination
DNA Metabolic Process
Post-translational Protein Modification
Protein K63-linked Ubiquitination
Protein Binding
Identical Protein Binding
Ubiquitin-protein Transferase Activity
Negative Regulation Of Biosynthetic Process
Protein Modification Process
Double-strand Break Repair
Protein K48-linked Ubiquitination
Regulation Of Nucleobase-containing Compound Metabolic Process
Chromosome
DNA Recombination
Negative Regulation Of Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Gene Expression
Chromosome, Telomeric Region
Nucleosome
Negative Regulation Of Membrane Tubulation
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Protein K11-linked Ubiquitination
Double-strand Break Repair Via Homologous Recombination
Negative Regulation Of Macromolecule Metabolic Process
Recombinational Repair
Structural Constituent Of Chromatin
DNA/DNA Annealing Activity
Regulation Of Double-strand Break Repair
UBC13-MMS2 Complex
Cellular Response To Stress
Ubiquitin Protein Ligase Binding
Positive Regulation Of Protein Polyubiquitination
Regulation Of Metabolic Process
Positive Regulation Of Double-strand Break Repair
Telomeric D-loop Binding
ISG15 Transferase Activity
Ubiquitin Conjugating Enzyme Complex
Regulation Of RNA Metabolic Process
ATP Binding
Cytoplasm
Regulation Of Long-term Neuronal Synaptic Plasticity
Organelle Assembly
Regulation Of Glycolytic Process
Histone H3K27 Acetyltransferase Activity
Regulation Of Neuronal Synaptic Plasticity
Regulation Of Carbohydrate Catabolic Process
Positive Regulation Of Glycolytic Process
Histone H3K18 Acetyltransferase Activity
N-terminal Peptidyl-lysine Acetylation
Peptide Lactyltransferase (CoA-dependent) Activity
Cellular Response To Nutrient Levels
Regulation Of ATP Metabolic Process
Regulation Of Purine Nucleotide Metabolic Process
Nucleoplasm
Intracellular Signal Transduction
Ciliary Basal Body
Positive Regulation Of ATP Metabolic Process
Regulation Of Synaptic Plasticity
Regulation Of Tubulin Deacetylation
Regulation Of Long-term Synaptic Potentiation
Modulation Of Excitatory Postsynaptic Potential
Positive Regulation Of Long-term Neuronal Synaptic Plasticity
Regulation Of Generation Of Precursor Metabolites And Energy
Cellular Response To Nitrogen Starvation
Regulation Of Protein Deacetylation
Positive Regulation Of Synaptic Transmission
Negative Regulation Of Long-term Synaptic Potentiation
N-terminal Protein Amino Acid Acetylation
Cellular Response To Stress
Peptidyl-lysine Acetylation
Intracellular Signaling Cassette
Positive Regulation Of Small Molecule Metabolic Process
Cytosol
Damaged DNA Binding
Prp19 Complex
Phosphatidylethanolamine Binding
Regulation Of Plasma Membrane Bounded Cell Projection Organization
Positive Regulation Of Neuron Apoptotic Process
Regulation Of Cellular Response To Heat
Ubiquitin Protein Ligase Binding
Regulation Of Cell Projection Organization
Chromatin Binding
Organelle Organization
Scaffold Protein Binding
Regulation Of Synaptic Transmission, Glutamatergic
Response To Nutrient Levels
GABA Receptor Binding
Regulation Of Small Molecule Metabolic Process
Cellular Response To Starvation
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Tagcloud (Intersection)
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