ATRIP and RPA3

Number of citations of the paper that reports this interaction (PubMedID 37827155)
181

Data Source:
BioGRID (pull down, proximity labelling technology, affinity chromatography technology)

		ATRIP	RPA3
Description		ATR interacting protein	replication protein A3
Image
GO Annotations	Cellular Component	Nucleus Nucleoplasm ATR-ATRIP Complex	Nucleus Nucleoplasm DNA Replication Factor A Complex Site Of Double-strand Break
	Molecular Function	Protein Binding K63-linked Polyubiquitin Modification-dependent Protein Binding	DNA Binding Damaged DNA Binding Single-stranded DNA Binding Protein Binding
	Biological Process	DNA Damage Checkpoint Signaling Nucleobase-containing Compound Metabolic Process DNA Repair DNA Damage Response Regulation Of Double-strand Break Repair	Telomere Maintenance Double-strand Break Repair Via Homologous Recombination DNA Replication DNA Repair Base-excision Repair Nucleotide-excision Repair Mismatch Repair DNA Recombination DNA Damage Response Regulation Of Mitotic Cell Cycle Regulation Of Cell Population Proliferation
Pathways		Activation of ATR in response to replication stress HDR through Single Strand Annealing (SSA) Processing of DNA double-strand break ends Presynaptic phase of homologous DNA pairing and strand exchange Fanconi Anemia Pathway Regulation of TP53 Activity through Phosphorylation G2/M DNA damage checkpoint Impaired BRCA2 binding to RAD51	Translesion synthesis by REV1 Recognition of DNA damage by PCNA-containing replication complex Translesion Synthesis by POLH Removal of the Flap Intermediate from the C-strand Activation of ATR in response to replication stress Regulation of HSF1-mediated heat shock response HSF1 activation Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta) PCNA-Dependent Long Patch Base Excision Repair Translesion synthesis by POLK Translesion synthesis by POLI Termination of translesion DNA synthesis HDR through Single Strand Annealing (SSA) HDR through Homologous Recombination (HRR) Processing of DNA double-strand break ends Presynaptic phase of homologous DNA pairing and strand exchange Formation of Incision Complex in GG-NER Gap-filling DNA repair synthesis and ligation in GG-NER Dual Incision in GG-NER Dual incision in TC-NER Gap-filling DNA repair synthesis and ligation in TC-NER Fanconi Anemia Pathway Regulation of TP53 Activity through Phosphorylation Activation of the pre-replicative complex Removal of the Flap Intermediate G2/M DNA damage checkpoint Meiotic recombination Impaired BRCA2 binding to RAD51
Drugs
Diseases
GWAS		Brain morphology (min-P) ( 32665545) Brain morphology (MOSTest) ( 32665545) Cortical surface area (MOSTest) ( 32665545) Crohn's disease ( 28067908) Inflammatory bowel disease ( 28067908) Subcortical volume (min-P) ( 32665545) Subcortical volume (MOSTest) ( 32665545) Ulcerative colitis ( 28067908)	Drug-induced Stevens-Johnson syndrome or toxic epidermal necrolysis (SJS/TEN) ( 21221126) Estimated glomerular filtration rate ( 29779033) Insulin-like growth factors ( 21216879) Interstitial lung diseases in rheumatoid arthritis ( 32737115) Intraocular pressure ( 30591961) Serum creatinine levels ( 29779033) Urate levels in obese individuals ( 25811787)
Interacting Genes		28 interacting genes: BRCA1 C1orf94 CCDC28B CDC23 CDC6 CDK16 CEP164 CINP ETAA1 FAAP100 FAM156A LNX1 MCM2 MCM3 MCM5 MCM6 METTL21A MID2 MOS MX2 POLR1C PRKDC RPA3 SCG2 SIRT2 SPRY2 TASOR2 ZBTB14	10 interacting genes: ATRIP ERCC1 MCM2 PRPF19 RAD51 RFWD3 RPA1 RPA2 RPA4 WAS
Entrez ID		84126	6119
HPRD ID			01567
Ensembl ID		ENSG00000164053	ENSG00000106399
Uniprot IDs		Q8WXE1	A4D105 P35244
PDB IDs		4IGK 4NB3 5YZ0 7XV4	1L1O 1QUQ 2PI2 2PQA 2Z6K 3KDF 8RK2 9MJ5
Enriched GO Terms of Interacting Partners?		DNA Metabolic Process DNA Repair DNA Replication Initiation Double-strand Break Repair Via Homologous Recombination CMG Complex MCM Complex Recombinational Repair DNA Replication Double-strand Break Repair Via Break-induced Replication Regulation Of DNA-templated DNA Replication Initiation DNA Damage Response Double-strand Break Repair DNA Recombination Chromosome, Telomeric Region Regulation Of Cell Cycle Phase Transition Single-stranded DNA Binding Regulation Of DNA Replication DNA Replication Origin Binding Cellular Response To Stress Single-stranded DNA Helicase Activity Regulation Of Cell Cycle Nucleic Acid Metabolic Process Regulation Of DNA Metabolic Process Regulation Of Mitotic Cell Cycle Macromolecule Metabolic Process Regulation Of Mitotic Cell Cycle Phase Transition Mitotic DNA Replication Initiation Regulation Of Cell Cycle Process Response To Stress Negative Regulation Of Cell Cycle Phase Transition Helicase Activity Regulation Of Chromosome Segregation Nucleobase-containing Compound Metabolic Process Negative Regulation Of Cell Cycle Process Mitotic G2/M Transition Checkpoint Nucleoplasm Negative Regulation Of Mitotic Cell Cycle Phase Transition Regulation Of Meiotic Cell Cycle 3'-5' DNA Helicase Activity Negative Regulation Of G2/M Transition Of Mitotic Cell Cycle Mitotic DNA Integrity Checkpoint Signaling Negative Regulation Of Cell Cycle G2/M Phase Transition Negative Regulation Of Cell Cycle Regulation Of Exit From Mitosis Negative Regulation Of Mitotic Cell Cycle Regulation Of Protein Phosphorylation Negative Regulation Of Fatty Acid Biosynthetic Process Regulation Of Phosphorylation Regulation Of DNA Damage Checkpoint Nucleolus	Site Of Double-strand Break Double-strand Break Repair DNA Repair DNA Metabolic Process Single-stranded DNA Binding DNA Recombination DNA Damage Response DNA Replication Factor A Complex Double-strand Break Repair Via Homologous Recombination Recombinational Repair Chromosome, Telomeric Region Regulation Of Cell Cycle Phase Transition Negative Regulation Of Cell Cycle Phase Transition DNA Damage Checkpoint Signaling Negative Regulation Of Cell Cycle Process Cellular Response To Stress Signal Transduction In Response To DNA Damage Nucleotide-excision Repair Negative Regulation Of Cell Cycle Regulation Of Cell Cycle Process Nucleic Acid Metabolic Process Regulation Of DNA Metabolic Process Regulation Of Cellular Response To Stress Telomere Maintenance Regulation Of DNA Damage Checkpoint Response To Stress PML Body Nuclear Chromosome Regulation Of Cell Cycle Telomere Organization Nucleobase-containing Compound Metabolic Process DNA Replication Regulation Of Double-strand Break Repair Interstrand Cross-link Repair Damaged DNA Binding Regulation Of DNA Repair G-rich Strand Telomeric DNA Binding Nucleus Regulation Of Double-strand Break Repair Via Homologous Recombination Intracellular Signal Transduction Telomere Maintenance Via Recombination Lateral Element Mitotic G1 DNA Damage Checkpoint Signaling Chromosome Organization Mitotic G1/S Transition Checkpoint Signaling Single-stranded DNA Helicase Activity Nucleoplasm Mitotic Recombination Regulation Of DNA Recombination Response To Ionizing Radiation
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