TRB and CTCF

Number of citations of the paper that reports this interaction (PMID 20404925)
8

Data Source:
BioGRID (pull down, pull down)

		TRB	CTCF
Gene Name		T cell receptor beta locus	CCCTC-binding factor (zinc finger protein)
Image		No pdb structure
Gene Ontology Annotations	Cellular Component		Chromosome, Centromeric Region Condensed Chromosome Nucleus Nucleoplasm Nucleolus
	Molecular Function		RNA Polymerase II Core Promoter Proximal Region Sequence-specific DNA Binding RNA Polymerase II Core Promoter Proximal Region Sequence-specific DNA Binding Transcription Factor Activity Involved In Negative Regulation Of Transcription Sequence-specific DNA Binding Transcription Factor Activity Transcription Corepressor Activity Protein Binding Zinc Ion Binding Chromatin Insulator Sequence Binding Sequence-specific DNA Binding Transcription Regulatory Region DNA Binding
	Biological Process		Negative Regulation Of Transcription From RNA Polymerase II Promoter DNA Methylation Regulation Of Gene Expression By Genetic Imprinting Transcription, DNA-templated Chromosome Segregation Maintenance Of DNA Methylation Positive Regulation Of Gene Expression Chromatin Modification Nucleosome Positioning Regulation Of Histone Methylation Regulation Of Histone Acetylation Regulation Of Gene Expression, Epigenetic Regulation Of Molecular Function, Epigenetic Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription, DNA-templated Regulation Of Centromeric Sister Chromatid Cohesion
Pathways
Drugs
Diseases
GWAS			HDL cholesterol ( 19060911)
Protein-Protein Interactions		15 interactors: CD1D CD247 CD3D CD3E CD3G CTCF HLA-A HLA-B HLA-DRB1 NCOA6 NCOR1 TAF1B TRA TRAT1 TRD	13 interactors: CHD7 CHD8 HMGB1 POLR2A RXRA SIN3A SMAD3 SMAD4 SUZ12 THRB TRB YBX1 ZMYM4
Entrez ID		6957	10664
HPRD ID		01739	05005
Ensembl ID			ENSG00000102974
Uniprot IDs			P49711
PDB IDs			1X6H 2CT1
Enriched GO Terms of Interacting Partners?		Positive Regulation Of Immune Response Positive Regulation Of T Cell Activation Positive Regulation Of Homotypic Cell-cell Adhesion T Cell Receptor Signaling Pathway Positive Regulation Of Cell-cell Adhesion Antigen Receptor-mediated Signaling Pathway Regulation Of Immune Response Regulation Of T Cell Activation Positive Regulation Of Cell Activation Positive Regulation Of Immune System Process Detection Of Bacterium T Cell Costimulation Immune System Process Regulation Of Cell-cell Adhesion Positive Regulation Of Cell Adhesion Regulation Of Lymphocyte Activation Detection Of Biotic Stimulus Regulation Of Cell Activation Regulation Of Immune System Process Immune Response-activating Cell Surface Receptor Signaling Pathway Regulation Of Cell Adhesion Immune Response-regulating Cell Surface Receptor Signaling Pathway Antigen Processing And Presentation Of Endogenous Antigen Innate Immune Response Immune Response-regulating Signaling Pathway T Cell Aggregation T Cell Activation Lymphocyte Aggregation Leukocyte Aggregation Leukocyte Cell-cell Adhesion Homotypic Cell-cell Adhesion Antigen Processing And Presentation Of Endogenous Peptide Antigen Via MHC Class I Via ER Pathway, TAP-independent Protection From Natural Killer Cell Mediated Cytotoxicity T Cell Differentiation Immune Response T Cell Selection Lymphocyte Activation Defense Response Negative Regulation Of Natural Killer Cell Mediated Cytotoxicity Leukocyte Activation Cell Surface Receptor Signaling Pathway Single Organismal Cell-cell Adhesion Antigen Processing And Presentation Lymphocyte Differentiation Interferon-gamma-mediated Signaling Pathway Regulation Of T Cell Anergy Regulation Of Interferon-gamma Production Hemopoiesis Antigen Processing And Presentation Of Endogenous Peptide Antigen Via MHC Class I Cellular Response To Interferon-gamma	Negative Regulation Of Transcription From RNA Polymerase II Promoter Negative Regulation Of Transcription, DNA-templated Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Gene Expression Negative Regulation Of Biosynthetic Process In Utero Embryonic Development Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Transcription, DNA-templated Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Cellular Biosynthetic Process RNA Biosynthetic Process Transcription Initiation From RNA Polymerase II Promoter Regulation Of Transcription From RNA Polymerase II Promoter Chordate Embryonic Development Embryo Development Ending In Birth Or Egg Hatching Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Cellular Metabolic Process Transcription From RNA Polymerase II Promoter DNA-templated Transcription, Initiation Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Gene Expression Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Cellular Macromolecule Biosynthetic Process Positive Regulation Of Cellular Metabolic Process Embryo Development Cellular Nitrogen Compound Metabolic Process Macromolecule Biosynthetic Process Developmental Process Nitrogen Compound Metabolic Process Heart Morphogenesis Positive Regulation Of Metabolic Process Multicellular Organismal Development Biosynthetic Process SMAD Protein Complex Assembly Regulation Of Binding Anatomical Structure Development Chromatin Modification Regulation Of Transforming Growth Factor Beta2 Production Tube Development Chromatin Organization
Tagcloud ?		cdr3 clonotypes complementarity detailed effusion expansive extrapulmonary families firstly illumina manifestation mononuclear oligoclonal pbmcs peaks pemcs platform pleural pltb profiled repertoire sequenced skewed spectratyping tcr throughput trbj1 trbv trbv20	acting angle bend bending binds chicken confer direction efficiently erba f1 f2 fails flexure hetero heterodimer homodimer homologue lysozyme magnitude nep1 quaternary represses rxr silencer simultaneously synergistically t3 tr
Tagcloud (Difference) ?		cdr3 clonotypes complementarity detailed effusion expansive extrapulmonary families firstly illumina manifestation mononuclear oligoclonal pbmcs peaks pemcs platform pleural pltb profiled repertoire sequenced skewed spectratyping tcr throughput trbj1 trbv trbv20	acting angle bend bending binds chicken confer direction efficiently erba f1 f2 fails flexure hetero heterodimer homodimer homologue lysozyme magnitude nep1 quaternary represses rxr silencer simultaneously synergistically t3 tr
Tagcloud (Intersection) ?