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TMEM248 and BARD1
Number of citations of the paper that reports this interaction (PMID
22990118
)
7
Data Source:
BioGRID
(two hybrid, affinity chromatography technology)
TMEM248
BARD1
Gene Name
transmembrane protein 248
BRCA1 associated RING domain 1
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Integral Component Of Membrane
Ubiquitin Ligase Complex
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
BRCA1-BARD1 Complex
Intracellular Membrane-bounded Organelle
BRCA1-A Complex
Molecular Function
RNA Binding
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Ligase Activity
Kinase Binding
Protein Homodimerization Activity
Protein Heterodimerization Activity
Biological Process
Tissue Homeostasis
DNA Repair
Cellular Response To DNA Damage Stimulus
Cell Cycle Arrest
Protein Ubiquitination
Negative Regulation Of MRNA 3'-end Processing
Regulation Of Phosphorylation
Positive Regulation Of Apoptotic Process
Negative Regulation Of Apoptotic Process
Positive Regulation Of Protein Catabolic Process
Negative Regulation Of Protein Export From Nucleus
Protein K6-linked Ubiquitination
Pathways
Drugs
Diseases
GWAS
Neuroblastoma (
22941191
21124317
)
Neuroblastoma (high-risk) (
19412175
)
Protein-Protein Interactions
2 interactors:
BARD1
SYNE4
107 interactors:
ACP1
AKIP1
AP1B1
ASH2L
ATP1B1
ATP1B3
BCCIP
BCL3
BRCA1
BRD7
BRIP1
CAP1
CASC1
CCDC136
CEP70
CHD3
CNTN4
COL1A1
COMMD1
CRIPAK
CSTF1
DCC
DDX39B
EWSR1
EXOC5
FAM9B
FEZ1
FKBP1A
FKBP2
FKBP3
FUCA1
GIT1
GOLGA2
GPRASP2
H2AFX
HAP1
HIST2H2AC
HNRNPC
HNRNPLL
HSPA14
IDI1
IKBKAP
ING5
KAT5
KAT7
KBTBD7
KRT40
LDOC1
LGALS3
LGALS8
LRIF1
MDC1
MRPS22
MSH2
MSH3
MSH6
MT2A
ND1
NFKBIA
NPC2
OLA1
PCBP2
PDXK
PDZD8
PIAS1
PIAS4
POLR2A
POLR2H
POMZP3
POU2F1
PSMA7
PTN
RBBP8
RBMY2BP
RPS20
SELENBP1
SETDB1
SMCHD1
SNRNP200
SNX3
SPAG5
SRSF2
TCERG1
TMEM248
TOP1
TP53
TRAF1
TRAPPC11
TRAPPC8
TULP2
UBE2D1
UBE2D2
UBE2D3
UBE2E1
UBE2E2
UBE2E3
UBE2N
UBE2U
UBE2W
UBE3A
UBR5
UBXN1
WDR61
XRCC6
ZFP64
ZHX1
ZNF121
Entrez ID
55069
580
HPRD ID
08541
03354
Ensembl ID
ENSG00000106609
ENSG00000138376
Uniprot IDs
Q9NWD8
Q99728
PDB IDs
1JM7
2NTE
2R1Z
3C5R
3FA2
Enriched GO Terms of Interacting Partners
?
Negative Regulation Of MRNA 3'-end Processing
Establishment Of Epithelial Cell Apical/basal Polarity
Negative Regulation Of Protein Export From Nucleus
Protein K6-linked Ubiquitination
Establishment Of Apical/basal Cell Polarity
Polarized Epithelial Cell Differentiation
Establishment Of Monopolar Cell Polarity
Regulation Of MRNA 3'-end Processing
Establishment Of Epithelial Cell Polarity
Establishment Or Maintenance Of Epithelial Cell Apical/basal Polarity
Morphogenesis Of A Polarized Epithelium
Establishment Or Maintenance Of Apical/basal Cell Polarity
Regulation Of Protein Export From Nucleus
Negative Regulation Of Intracellular Protein Transport
Regulation Of MRNA Processing
Establishment Of Cell Polarity
Negative Regulation Of Intracellular Transport
Cellular Response To DNA Damage Stimulus
DNA Repair
Protein Polyubiquitination
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Cellular Response To Stress
Nitrogen Compound Metabolic Process
Double-strand Break Repair
DNA Metabolic Process
Gene Expression
Chromosome Organization
Regulation Of Metabolic Process
Protein K48-linked Ubiquitination
Regulation Of Nitrogen Compound Metabolic Process
RNA Metabolic Process
Protein Modification By Small Protein Conjugation
RNA Biosynthetic Process
Transcription, DNA-templated
Regulation Of Protein Ubiquitination
Cellular Metabolic Process
Regulation Of Gene Expression
Positive Regulation Of Metabolic Process
Regulation Of RNA Metabolic Process
Response To Stress
Cell Cycle Checkpoint
DNA Recombination
Negative Regulation Of Cellular Metabolic Process
Regulation Of RNA Biosynthetic Process
Macromolecule Biosynthetic Process
Protein Ubiquitination
Positive Regulation Of Cellular Metabolic Process
Meiotic Mismatch Repair
Cellular Macromolecule Biosynthetic Process
Ubiquitin-dependent Protein Catabolic Process
Regulation Of Nucleic Acid-templated Transcription
Modification-dependent Protein Catabolic Process
Chromatin Organization
DNA Damage Checkpoint
Cellular Macromolecule Catabolic Process
Immune System Process
Viral Process
Cell Cycle
Proteolysis Involved In Cellular Protein Catabolic Process
Organelle Organization
Cellular Protein Catabolic Process
Regulation Of Transcription From RNA Polymerase II Promoter
Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process
Regulation Of Transcription, DNA-templated
Tagcloud
?
10ng
agreed
atr
belonged
biosynthetic
biphenyls
brca2
dioxin
fancd2
figf
hands
immunoblots
impulses
kcnma1
lactational
mycn
ndl
neurobiological
npy4r
ontology
operator6
pcbs
performances
projection
rad51
scn1a
summation
transcriptomic
validating
Tagcloud (Difference)
?
10ng
agreed
atr
belonged
biosynthetic
biphenyls
brca2
dioxin
fancd2
figf
hands
immunoblots
impulses
kcnma1
lactational
mycn
ndl
neurobiological
npy4r
ontology
operator6
pcbs
performances
projection
rad51
scn1a
summation
transcriptomic
validating
Tagcloud (Intersection)
?