ANKHD1 and EXOSC8

Number of citations: 84 (PubMedID 34133714)
Data Source: BioGRID (two hybrid)

		ANKHD1	EXOSC8
Name		ankyrin repeat and KH domain containing 1	exosome component 8
Structure		No pdb structure
GO Annotations	Cellular Component	Nucleus Cytoplasm	Nuclear Exosome (RNase Complex) Cytoplasmic Exosome (RNase Complex) Exosome (RNase Complex) Fibrillar Center Nucleus Nucleoplasm Chromosome Nucleolus Cytoplasm Cytosol Nucleolar Exosome (RNase Complex) Exoribonuclease Complex
	Molecular Function	Nucleic Acid Binding RNA Binding Protein Binding	RNA Binding RNA Exonuclease Activity Protein Binding MRNA 3'-UTR AU-rich Region Binding Identical Protein Binding
	Biological Process	Innate Immune Response	Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA) RRNA Processing RNA Processing RNA Catabolic Process RRNA Catabolic Process U1 SnRNA 3'-end Processing U4 SnRNA 3'-end Processing U5 SnRNA 3'-end Processing Nuclear MRNA Surveillance Nuclear Polyadenylation-dependent RRNA Catabolic Process TRAMP-dependent TRNA Surveillance Pathway
Pathways		None	ATF4 activates genes in response to endoplasmic reticulum stress mRNA decay by 3' to 5' exoribonuclease Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA KSRP (KHSRP) binds and destabilizes mRNA Major pathway of rRNA processing in the nucleolus and cytosol Nuclear RNA decay
GWAS		Bipolar disorder ( 31043756 ) Bipolar I disorder ( 31043756 ) Serum immune biomarker levels ( 32066700 )	No GWAS studies recorded
Novel Interactors		None recorded	6 novel interactors: CAB39L EEF1DP3 MAPK8IP1 N4BP2L2 PDCD1LG2 RERG
Interacting Genes		33 interacting genes: ATXN1 ATXN1L BAG4 BCAS2 DMRTB1 EIF3E EIF4A3 EIF4ENIF1 EXOSC8 FHL3 GOLGA2 KRTAP15-1 KRTAP19-5 LENG8 LUC7L2 NFKBIE NOD2 POLR2M PRR20A PRR20B PRR20C PRR20D PRR20E PRRC2B QKI RBFOX2 RBPMS RNF10 TXNL4A UBC YTHDF3 ZNF34 ZNF346	112 interacting genes: AEN ANKHD1 ATF2 C22orf39 CCDC28A-AS1 CCL14 CCSER2 CNNM3 COL23A1 COX5A CPSF7 CRMP1 CWC22 DDIT4L DIS3 DUSP23 ERAL1 EXOSC1 EXOSC10 EXOSC2 EXOSC4 EXOSC5 EXOSC6 EXOSC7 EXOSC9 FAM161B FAM90A1 FHOD1 FOXD4L1 FOXN3 FRG1 FSAF1 FYTTD1 GEM HAPLN2 HOXB9 ILF2 INCA1 KANK2 KCNJ11 LENG1 LMO4 LNX1 LSM1 LSM4 LSM7 MACIR METTL14 MKRN1 MORN4 MRPL2 MTREX MYOZ1 NEDD9 NTAQ1 NXF1 OTUD4 PACSIN2 PALS2 PHF21A PIAS2 PKP2 POLDIP3 PRC1 PRPF31 PRPF6 PRR3 RASD1 RASSF1 RBBP4 RBM22 RBM7 REL RFC5 RPL3 RPLP0 RPP14 RPS28 RUSC1 RXRB SARNP SF1 SFPQ SGO2 SLAIN1 SLIRP SNAI1 SNRPA SNRPB SNRPC SNRPN SNW1 SOCS7 SPATC1L SRPK2 SRSF10 SUGP2 TBRG1 TCEA2 TFAP4 TFIP11 TXNDC17 TXNDC9 UBC UNKL UPF2 USP2 USP6 UTP14A XRN1 XRN2 ZFP36
Entrez ID		54882	11340
HPRD ID		16489	09351
Ensembl ID		ENSG00000131503	ENSG00000120699
Uniprot IDs		Q8IWZ3	Q96B26
PDB IDs		Not available	2NN6 6D6Q 6D6R 6H25 9G8M 9G8N 9G8O 9G8P
GO Terms Enriched among Interactors		RNA Binding MRNA Binding Regulation Of MRNA Metabolic Process POZ Domain Binding Membraneless Organelle Assembly RNA Metabolic Process MRNA Metabolic Process RNA Processing Negative Regulation Of Translation RNA Splicing Positive Regulation Of Myelination MRNA Splicing, Via Spliceosome Nucleus Regulation Of Translation Nuclear-transcribed MRNA Catabolic Process MRNA Catabolic Process Nuclear Export Regulation Of Gliogenesis Positive Regulation Of MRNA Catabolic Process Stress Granule Assembly RNA Splicing, Via Transesterification Reactions Regulation Of Nervous System Process Negative Regulation Of MRNA Metabolic Process Cytoplasmic Stress Granule MRNA Processing Internal N(7)-methylguanine-containing RNA Reader Activity Regulation Of MRNA Splicing, Via Spliceosome Negative Regulation Of MRNA Modification Negative Regulation Of Selenocysteine Incorporation Cellular Response To Selenite Ion P-body Negative Regulation Of Deadenylation-dependent Decapping Of Nuclear-transcribed MRNA Detection Of Muramyl Dipeptide Muramyl Dipeptide Binding Maintenance Of ER Location	RNA Binding MRNA Metabolic Process Exosome (RNase Complex) RNA Processing RNA Metabolic Process Nuclear Exosome (RNase Complex) Cytoplasmic Exosome (RNase Complex) Nucleic Acid Metabolic Process Nucleolar Exosome (RNase Complex) RNA Splicing, Via Transesterification Reactions Nucleus Nuclear-transcribed MRNA Catabolic Process Nuclear MRNA Surveillance RNA Catabolic Process MRNA Splicing, Via Spliceosome MRNA Catabolic Process RNA Exonuclease Activity MRNA Processing RNA Splicing Nucleoplasm Nucleobase-containing Compound Metabolic Process Spliceosomal Complex Nuclear RNA Surveillance U4 SnRNA 3'-end Processing RNA Surveillance RRNA Catabolic Process 3'-5'-RNA Exonuclease Activity Nucleobase-containing Compound Catabolic Process Nucleic Acid Binding SnRNA Metabolic Process RRNA Metabolic Process RRNA Processing Catalytic Step 2 Spliceosome Poly(A)-dependent SnoRNA 3'-end Processing SnRNA 3'-end Processing Ribonucleoprotein Complex U4/U6 X U5 Tri-snRNP Complex Macromolecule Metabolic Process Nucleolus Exoribonuclease Complex Negative Regulation Of Macromolecule Metabolic Process Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA) TRNA Surveillance TRAMP-dependent TRNA Surveillance Pathway Nuclear Polyadenylation-dependent RRNA Catabolic Process Sno(s)RNA Metabolic Process SnRNA Processing RNA 3'-end Processing Negative Regulation Of Macromolecule Biosynthetic Process Protein Binding