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XRCC6 and DYSF
Number of citations of the paper that reports this interaction (PubMedID
23414517
)
48
Data Source:
BioGRID
(two hybrid)
XRCC6
DYSF
Description
X-ray repair cross complementing 6
dysferlin
Image
GO Annotations
Cellular Component
Chromosome, Telomeric Region
Nuclear Telomere Cap Complex
Extracellular Region
Nucleus
Nucleoplasm
Transcription Regulator Complex
Chromosome
Nucleolus
Cytoplasm
Cytosol
DNA-dependent Protein Kinase-DNA Ligase 4 Complex
Membrane
Protein-containing Complex
Protein-DNA Complex
Secretory Granule Lumen
Ku70:Ku80 Complex
DNA-dependent Protein Kinase Complex
Nonhomologous End Joining Complex
Ficolin-1-rich Granule Lumen
Endosome
Early Endosome
Late Endosome
Plasma Membrane
Endomembrane System
Membrane
Endocytic Vesicle
T-tubule
Cytoplasmic Vesicle Membrane
Synaptic Vesicle Membrane
Cytoplasmic Vesicle
Late Endosome Membrane
Centriolar Satellite
Sarcolemma
Extracellular Exosome
Molecular Function
Nucleotide Binding
Transcription Cis-regulatory Region Binding
DNA Binding
DNA Helicase Activity
Damaged DNA Binding
Double-stranded DNA Binding
Double-stranded Telomeric DNA Binding
RNA Binding
Catalytic Activity
Helicase Activity
Protein Binding
ATP Binding
ATP-dependent Activity, Acting On DNA
Hydrolase Activity
Lyase Activity
ATP Hydrolysis Activity
Cyclin Binding
Telomeric DNA Binding
Protein-containing Complex Binding
DNA End Binding
5'-deoxyribose-5-phosphate Lyase Activity
Scaffold Protein Binding
Calcium Ion Binding
Protein Binding
Phospholipid Binding
Calcium-dependent Phospholipid Binding
Lipid Binding
Metal Ion Binding
Biological Process
Telomere Maintenance
Recombinational Repair
Activation Of Innate Immune Response
Immune System Process
Positive Regulation Of Immune System Process
DNA Repair
Double-strand Break Repair Via Nonhomologous End Joining
DNA Recombination
DNA Damage Response
Response To Ionizing Radiation
Negative Regulation Of Macromolecule Biosynthetic Process
Innate Immune Response
Positive Regulation Of Lymphocyte Differentiation
Positive Regulation Of Protein Kinase Activity
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Smooth Muscle Cell Proliferation
Cellular Hyperosmotic Salinity Response
Cellular Response To Gamma Radiation
Cellular Response To X-ray
Double-strand Break Repair Via Classical Nonhomologous End Joining
Monocyte Activation Involved In Immune Response
Macrophage Activation Involved In Immune Response
Regulation Of Neurotransmitter Secretion
Negative Regulation Of Phagocytosis
Pathways
2-LTR circle formation
Cytosolic sensors of pathogen-associated DNA
IRF3-mediated induction of type I IFN
Nonhomologous End-Joining (NHEJ)
Neutrophil degranulation
Smooth Muscle Contraction
Smooth Muscle Contraction
Drugs
Diseases
Dysferlinopathies, including: Miyoshi myopathy (MM); Limb-girdle muscular dystrophy (LGMD) 2B; Distal myopathy with anterior tibial onset (DMAT)
Limb-girdle muscular dystrophy (LGMD)
Distal muscular dystrophies, including: Welander distal myopathy (WDM); Tibial muscular dystrophy (TMD); Nonaka distal myopathy with rimmed vacuoles (DMRV); Miyoshi myopathy (MM); Laing myopathy (MPD1); Distal nebulin myopathy (DNM); Distal desminopathy (MFM1); alpha-B Crystallinopathy (MFM2); Distal myotilinopathy (MFM3); Distal zaspopathy (MFM4); Distal myopathy 3 (MPD2, VCPDM)
GWAS
Asthma (
34103634
)
Breast cancer (
29059683
)
Meat-related diet (
32066663
)
Neuroticism (
29255261
)
Pulse pressure (
28135244
)
Refractive error (
32231278
)
Appendicular lean mass (
33097823
)
Asthma (
32296059
)
Extremely high intelligence (
29520040
)
General cognitive ability (
29844566
)
Hip circumference adjusted for BMI (
28552196
34021172
)
Nonalcoholic steatohepatitis-derived hepatocellular carcinoma (
29385134
)
PR interval in Tripanosoma cruzi seropositivity (
24324551
)
Protein quantitative trait loci (
18464913
)
Urate levels in overweight individuals (
25811787
)
Interacting Genes
144 interacting genes:
ABCD4
ABL1
ACD
ADCY7
ANXA1
APEX1
AR
ARAP1
ATP23
ATP6V1E1
BARD1
BAZ1A
BTG1
CAPN11
CBX5
CCNA1
CCNB1
CCT3
CD40
CDCA5
CDK1
CDK2
CDKN1A
CEBPA
CENPU
CHAF1A
CHEK1
CLTC
CLU
CMTM6
COIL
COPB1
CREBBP
CSNK2A1
CTBP2
DEAF1
DLX2
DNTT
DSCR4
DUX4
DYRK1A
DYSF
EFNA1
EGFR
EID1
EIF4ENIF1
ELF3
EP300
EPS8
ETS1
FCER2
FILNC1
FMNL1
GAL3ST4
GSE1
GZMA
GZMB
HACL2
HERPUD1
HOXB7
HOXC4
HOXD4
HSF1
HTT
JPT2
KAT2A
KAT2B
KIAA0408
LIG3
MAP2K5
MAP4K2
MAPK8
MRE11
MSX2
NAA15
NCF4
NCL
NCOA6
NIT1
NOTCH1
OGT
PAEP
PAFAH1B3
PARP1
PCNA
PDK1
PDPK1
PDX1
PECAM1
PGAM1
PGR
PIN1
PLGRKT
PNRC2
POR
POU2F1
POU2F2
PRKDC
PRPF40A
PTEN
PTTG1
QRSL1
RASA1
RBBP4
RGS2
RNF10
RNF126
RNF146
RPLP1
RPS10
RRAS2
RUNX2
SDHC
SELENOF
SERPINA2
SERPINB9
SET
SGO1
SIRT3
SKIL
SMAD3
SMAD7
SNTA1
SNU13
SPARC
SUMO2
TAC1
TADA3
TBCD
TCF4
TERF2
TERT
TP53
UBC
USP14
VAV1
VBP1
WBP4
WEE2-AS1
WRN
XRCC5
YWHAZ
ZBTB7A
ZNF512B
40 interacting genes:
AKAP1
ANKRD1
ANXA1
ANXA2
APPL1
CAPN3
CAV3
CMYA5
COL12A1
COL6A3
DGKD
DHX15
DNAJB6
EEF1A1
EEF1G
FAM120A
GNL3
KARS1
KIF1B
MORF4L1
MYBPC1
MYBPC2
MYH3
MYOM1
MYOM2
NPHP3
OPTN
OS9
PHF1
PLP1
RNF10
RNF2
SAMHD1
SGCG
SLC12A6
SNAPIN
TAF1
XIRP2
XRCC6
ZNF23
Entrez ID
2547
8291
HPRD ID
01071
04307
Ensembl ID
ENSG00000196419
ENSG00000135636
Uniprot IDs
B1AHC9
B4DE32
B4E356
P12956
O75923
PDB IDs
1JEQ
1JEY
1JJR
3RZX
5Y3R
6ERF
6ERG
6ERH
6ZHA
6ZHE
7AXZ
7K0Y
7K1J
7K1K
7K1N
7LSY
7LT3
7NFC
7NFE
7SGL
7SU3
7Z6O
7Z87
7Z88
7ZT6
7ZVT
7ZWA
7ZYG
8AG4
8AG5
8ASC
8BH3
8BHV
8BHY
8BOT
8EZA
8EZB
8RD4
4CAH
4CAI
4IHB
4IQH
7JOF
7K6B
7KRB
9B8K
9B8L
Enriched GO Terms of Interacting Partners
?
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of Metabolic Process
Nucleoplasm
Regulation Of Macromolecule Metabolic Process
Regulation Of DNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Metabolic Process
DNA Damage Response
Cellular Response To Stress
Response To Stress
DNA Metabolic Process
DNA Repair
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of RNA Metabolic Process
Nucleus
Negative Regulation Of Biosynthetic Process
Positive Regulation Of RNA Biosynthetic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of DNA-templated Transcription
Regulation Of Macromolecule Biosynthetic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Chromatin Binding
Regulation Of Programmed Cell Death
Negative Regulation Of RNA Metabolic Process
Regulation Of Cellular Response To Stress
Chromosome, Telomeric Region
Protein-containing Complex
Regulation Of Protein Stability
Chromatin
Negative Regulation Of Programmed Cell Death
Double-strand Break Repair
Negative Regulation Of DNA-templated Transcription
Regulation Of Gene Expression
Negative Regulation Of RNA Biosynthetic Process
Regulation Of DNA Repair
Negative Regulation Of Apoptotic Process
Positive Regulation Of DNA Metabolic Process
Nucleic Acid Metabolic Process
Regulation Of Apoptotic Process
Negative Regulation Of Transcription By RNA Polymerase II
Sarcomere Organization
Myosin Filament
M Band
Actin Cytoskeleton Organization
Actomyosin Structure Organization
Muscle Organ Development
Actin Filament-based Process
Muscle Structure Development
Structural Constituent Of Muscle
Cellular Response To Salt Stress
Titin Binding
Myofibril
Sarcolemma
Cytoskeleton Organization
Response To Salt Stress
Extraocular Skeletal Muscle Development
Organelle Organization
Positive Regulation Of Transport
Vesicle Membrane
Kinase Binding
Phospholipase A2 Inhibitor Activity
Phospholipase Inhibitor Activity
Cellular Response To Osmotic Stress
Z Disc
Phosphatidylserine Binding
Membrane Raft Assembly
Cytoplasmic Side Of Lysosomal Membrane
Positive Regulation Of Endocytosis
Response To Osmotic Stress
Anterograde Synaptic Vesicle Transport
Cadherin Binding Involved In Cell-cell Adhesion
Translation Elongation Factor Activity
Positive Regulation Of Vesicle Fusion
Skeletal Muscle Organ Development
Regulation Of Protein Localization
Retrograde Axonal Transport
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