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CHD3 and SLC27A6
Number of citations of the paper that reports this interaction (PubMedID
16169070
)
0
Data Source:
BioGRID
(two hybrid)
HPRD
(two hybrid)
CHD3
SLC27A6
Description
chromodomain helicase DNA binding protein 3
solute carrier family 27 member 6
Image
No pdb structure
No pdb structure
GO Annotations
Cellular Component
Chromatin
Nucleus
Nucleoplasm
Nucleolus
Cytoplasm
Centrosome
Cytoskeleton
NuRD Complex
PML Body
Centriolar Satellite
Endoplasmic Reticulum Membrane
Plasma Membrane
Membrane
Sarcolemma
Molecular Function
Nucleotide Binding
Transcription Cis-regulatory Region Binding
DNA Binding
Chromatin Binding
RNA Binding
Helicase Activity
Protein Binding
ATP Binding
Zinc Ion Binding
Hydrolase Activity
ATP Hydrolysis Activity
Histone Binding
Metal Ion Binding
ATP-dependent Chromatin Remodeler Activity
Nucleotide Binding
Long-chain Fatty Acid-CoA Ligase Activity
Long-chain Fatty Acid Transmembrane Transporter Activity
Fatty Acid Transmembrane Transporter Activity
Ligase Activity
Very Long-chain Fatty Acid-CoA Ligase Activity
Arachidonate-CoA Ligase Activity
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Chromatin Organization
Chromatin Remodeling
Regulation Of DNA-templated Transcription
Spindle Organization
Centrosome Cycle
Regulation Of Cell Fate Specification
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Regulation Of Stem Cell Differentiation
Very Long-chain Fatty Acid Metabolic Process
Long-chain Fatty Acid Metabolic Process
Lipid Metabolic Process
Fatty Acid Metabolic Process
Lipid Transport
Long-chain Fatty Acid Transport
Long-chain Fatty Acid Import Into Cell
Pathways
HDACs deacetylate histones
ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression
SUMOylation of chromatin organization proteins
Regulation of TP53 Activity through Acetylation
RNA Polymerase I Transcription Initiation
Regulation of PTEN gene transcription
Regulation of PTEN gene transcription
Potential therapeutics for SARS
Regulation of endogenous retroelements by KRAB-ZFP proteins
Transcriptional regulation of brown and beige adipocyte differentiation by EBF2
Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs)
Transport of fatty acids
Drugs
Diseases
GWAS
Ischemic stroke (
26089329
)
Macular thickness (
30535121
)
Prostate cancer (
29892016
)
Refractive error (
32231278
)
Stroke (
26089329
)
Appendicular lean mass (
33097823
)
Atrial fibrillation (
29892015
30061737
)
Brain morphology (MOSTest) (
32665545
)
Congenital right-sided heart lesions (
33201861
)
Cortical surface area (MOSTest) (
32665545
)
Night sleep phenotypes (
27126917
)
PR interval (
32439900
)
Response to fenofibrate (total cholesterol levels) (
27002377
)
Subcortical volume (MOSTest) (
32665545
)
Interacting Genes
101 interacting genes:
ACTR1B
ADH5
AIMP2
ATP5IF1
BARD1
BCL6
BHLHE40
C4orf17
CASP6
CASP8
CBX4
CPE
CRCT1
CREB1
CREBBP
CSTF2
CTBP1
CTTN
ENTR1
ETV5
FABP4
FBP2
FUBP1
GADD45A
GIT1
GPS2
GSK3B
HABP4
HSD17B10
HSPH1
HTT
IK
IKZF1
IKZF3
IMMT
IVNS1ABP
KIF15
KPNA2
KPNB1
LRIF1
LUC7L2
MAFG
MAN2A2
MX1
MYB
NEFL
NR1H2
NR4A1
PAICS
PCMT1
PIAS1
PIAS4
PLK4
PRG2
PRPF40A
PSME1
PTN
PTPRS
PUF60
RAD51
RETREG2
RGS2
RIF1
RNF10
RPL29
SAFB
SAT1
SATB1
SERBP1
SERF2
SETX
SGSM2
SIRT6
SKIL
SLC27A6
SPOP
SRRT
STIP1
SUMO1
SUMO2
TAL1
TCERG1
THOC7
TNFRSF14
TNNT1
TP53
TP73
TRIM28
TRIM54
TSC22D1
TSPAN6
TTR
TXNDC9
UBA3
UBC
UBE2I
UROD
VIM
XRCC4
YAE1
ZHX1
6 interacting genes:
CHD3
CUTC
RACK1
TMEM62
TNFRSF10C
VIM
Entrez ID
1107
28965
HPRD ID
09071
09173
Ensembl ID
ENSG00000170004
ENSG00000113396
Uniprot IDs
A0A8V8TR54
B3KWV4
Q12873
Q2TAZ1
B2R8P6
Q9Y2P4
PDB IDs
Enriched GO Terms of Interacting Partners
?
Nucleoplasm
Nucleus
Negative Regulation Of Transcription By RNA Polymerase II
Identical Protein Binding
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Biosynthetic Process
SUMO Transferase Activity
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of RNA Metabolic Process
PML Body
Protein Sumoylation
Regulation Of DNA-templated Transcription
Negative Regulation Of Metabolic Process
Regulation Of RNA Biosynthetic Process
Cytoplasm
Regulation Of Macromolecule Metabolic Process
Regulation Of Primary Metabolic Process
Positive Regulation Of Apoptotic Process
Regulation Of Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Programmed Cell Death
RNA Binding
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Regulation Of Gene Expression
Ubiquitin Protein Ligase Binding
Regulation Of Cell Development
Presynaptic Cytosol
Postsynaptic Cytosol
Enzyme Binding
Positive Regulation Of Metabolic Process
Nucleic Acid Metabolic Process
Nuclear Speck
Regulation Of Neurogenesis
Macromolecule Metabolic Process
DNA Repair
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of Gliogenesis
Protein-containing Complex
Regulation Of Proteolysis
Positive Regulation Of Neuron Apoptotic Process
Regulation Of Cellular Response To Stress
Regulation Of Cell Differentiation
Transcription Corepressor Activity
Promoter-specific Chromatin Binding
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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