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PRPF38A and U2AF1
Number of citations of the paper that reports this interaction (PubMedID
22365833
)
0
Data Source:
BioGRID
(two hybrid)
PRPF38A
U2AF1
Description
pre-mRNA processing factor 38A
U2 small nuclear RNA auxiliary factor 1
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
U2-type Precatalytic Spliceosome
Precatalytic Spliceosome
Nucleus
Nucleoplasm
Spliceosomal Complex
Cajal Body
Nuclear Speck
Catalytic Step 2 Spliceosome
U2AF Complex
Molecular Function
RNA Binding
Protein Binding
Nucleic Acid Binding
RNA Binding
Protein Binding
Zinc Ion Binding
Pre-mRNA 3'-splice Site Binding
Metal Ion Binding
RS Domain Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Pathways
mRNA Splicing - Major Pathway
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Blood and toenail selenium levels (
25343990
)
Interacting Genes
29 interacting genes:
AP2M1
APP
CHERP
CLK1
CLK2
CSNK2A1
DHX8
DVL3
GTF3C1
JMJD6
LUC7L2
MAPK6
POLA2
PPIG
PRMT5
RBM39
RDX
RNPS1
SDCBP
SDCBP2
SRPK1
SRPK2
SRRM4
SRSF4
SRSF7
SRSF8
U2AF1
UBC
ZCCHC10
58 interacting genes:
ALG13
AP1B1
AP2B1
CARNMT1
CHERP
CIRSR
CLK2
CPEB2
DHX38
EFHC2
EPB41
FILNC1
FRA10AC1
HINFP
HMGB2
HNRNPK
HNRNPM
IL7R
JMJD6
KRT1
KRT75
MAP1B
MEOX2
MFAP1
MLH1
NDN
NKAP
NXF1
PABPC1
PRPF19
PRPF38A
PRPF4
PRPF40A
PTEN
RBM10
RNPS1
RP9
SF3A3
SF3B2
SNRNP35
SNRPD1
SRPK1
SRPK2
SRRM4
SRSF1
SRSF2
SRSF3
SUV39H1
TOE1
TRA2B
U2AF2
VEGFA
VPS26C
WEE2-AS1
ZCCHC10
ZNF417
ZRANB2
ZRSR2
Entrez ID
84950
7307
HPRD ID
10972
01871
Ensembl ID
ENSG00000134748
ENSG00000160201
Uniprot IDs
Q8NAV1
Q01081
Q7Z780
PDB IDs
4RZ9
4RZA
5F5S
5O9Z
6AHD
7AAV
7ABF
7ABG
7ABI
8H6K
8Q7N
8QO9
8QPE
8QZS
1JMT
Enriched GO Terms of Interacting Partners
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Regulation Of RNA Splicing
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
RNA Splicing
Nuclear Speck
MRNA Processing
Regulation Of MRNA Metabolic Process
MRNA Metabolic Process
RNA Binding
RNA Processing
RNA Metabolic Process
Nucleoplasm
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Nucleic Acid Metabolic Process
Nucleic Acid Binding
Nucleus
Nucleobase-containing Compound Metabolic Process
Negative Regulation Of MRNA Splicing, Via Spliceosome
Negative Regulation Of RNA Splicing
Protein Serine Kinase Activity
Frizzled Binding
Macromolecule Metabolic Process
RS Domain Binding
Protein Serine/threonine Kinase Activity
MRNA Binding
Protein Kinase Activity
Protein Heterodimerization Activity
Regulation Of Receptor Internalization
Protein-RNA Complex Assembly
Regulation Of Gene Expression
RNA Splicing, Via Transesterification Reactions
Kinase Activity
Regulation Of Macromolecule Biosynthetic Process
Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Positive Regulation Of JNK Cascade
Negative Regulation Of MRNA Metabolic Process
Low-density Lipoprotein Particle Receptor Binding
Protein Binding
Positive Regulation Of Receptor Internalization
Protein Serine/threonine/tyrosine Kinase Activity
Neuron Maturation
Regulation Of Receptor-mediated Endocytosis
Positive Regulation Of Viral Genome Replication
Amyloid-beta Complex
Growth Cone Lamellipodium
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Response To Calcium Ion
Amylin Binding
Positive Regulation Of Toll Signaling Pathway
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Metabolic Process
Spliceosomal Complex
Regulation Of MRNA Splicing, Via Spliceosome
RNA Binding
Nucleic Acid Metabolic Process
Regulation Of MRNA Processing
Regulation Of RNA Splicing
Nuclear Speck
Nucleic Acid Binding
Nucleobase-containing Compound Metabolic Process
Spliceosomal Complex Assembly
Regulation Of MRNA Metabolic Process
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Protein-RNA Complex Assembly
Macromolecule Metabolic Process
MRNA Binding
U2-type Precatalytic Spliceosome
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Metabolic Process
U12-type Spliceosomal Complex
Negative Regulation Of RNA Splicing
U2-type Spliceosomal Complex
Positive Regulation Of RNA Splicing
Precatalytic Spliceosome
U1 SnRNP
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Ribonucleoprotein Complex
Negative Regulation Of RNA Metabolic Process
Protein-containing Complex Assembly
U2-type Prespliceosome Assembly
Regulation Of Nucleobase-containing Compound Metabolic Process
U2 SnRNP
Commitment Complex
Positive Regulation Of Viral Genome Replication
Pre-mRNA 3'-splice Site Binding
U2AF Complex
MRNA Splice Site Recognition
Regulation Of RNA Metabolic Process
Protein-containing Complex Organization
MRNA 5'-splice Site Recognition
T Cell Differentiation In Thymus
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Tagcloud (Intersection)
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