Wiki-Pi
About
Search
People
Updates
Search
U2AF1 and SRRM4
Number of citations of the paper that reports this interaction (PubMedID
32296183
)
50
Data Source:
BioGRID
(two hybrid)
U2AF1
SRRM4
Description
U2 small nuclear RNA auxiliary factor 1
serine/arginine repetitive matrix 4
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Spliceosomal Complex
Cajal Body
Nuclear Speck
Catalytic Step 2 Spliceosome
U2AF Complex
Nucleus
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
Zinc Ion Binding
Pre-mRNA 3'-splice Site Binding
Metal Ion Binding
RS Domain Binding
RNA Binding
MRNA Binding
Protein Binding
Identical Protein Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Processing
Nervous System Development
Sensory Perception Of Sound
RNA Splicing
Cell Differentiation
Neuron Maturation
Regulation Of RNA Splicing
Pathways
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Blood and toenail selenium levels (
25343990
)
Cerebrospinal fluid t-tau levels in normal cognition (
29274321
)
Facial morphology (factor 3, length of philtrum) (
28441456
)
Loneliness (
27629369
)
Loneliness (linear analysis) (
27629369
)
Photic sneeze reflex (
27182965
)
Response to cyclophosphamide in systemic lupus erythematosus with lupus nephritis (
26980576
)
Stroke (
32693751
)
Interacting Genes
58 interacting genes:
ALG13
AP1B1
AP2B1
CARNMT1
CHERP
CIRSR
CLK2
CPEB2
DHX38
EFHC2
EPB41
FILNC1
FRA10AC1
HINFP
HMGB2
HNRNPK
HNRNPM
IL7R
JMJD6
KRT1
KRT75
MAP1B
MEOX2
MFAP1
MLH1
NDN
NKAP
NXF1
PABPC1
PRPF19
PRPF38A
PRPF4
PRPF40A
PTEN
RBM10
RNPS1
RP9
SF3A3
SF3B2
SNRNP35
SNRPD1
SRPK1
SRPK2
SRRM4
SRSF1
SRSF2
SRSF3
SUV39H1
TOE1
TRA2B
U2AF2
VEGFA
VPS26C
WEE2-AS1
ZCCHC10
ZNF417
ZRANB2
ZRSR2
34 interacting genes:
-
AKAP17A
ARL6IP4
C16orf87
C1orf35
CACNA1A
CDC37
CLK1
CLK4
FAM9B
LUC7L
LUC7L2
LUZP4
MCRS1
PRPF38A
RBM25
RBM39
RBMX2
RNPS1
RSRC1
SNIP1
SNRNP70
SREK1
SRRM1
SRSF11
SRSF4
TBC1D26
U2AF1
WDR5
ZNF124
ZNF286A
ZNF699
ZRSR2
ZRSR2P1
Entrez ID
7307
84530
HPRD ID
01871
13897
Ensembl ID
ENSG00000160201
ENSG00000139767
Uniprot IDs
Q01081
Q7Z780
A7MD48
V5T9A0
PDB IDs
1JMT
Enriched GO Terms of Interacting Partners
?
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Metabolic Process
Spliceosomal Complex
Regulation Of MRNA Splicing, Via Spliceosome
RNA Binding
Nucleic Acid Metabolic Process
Regulation Of MRNA Processing
Regulation Of RNA Splicing
Nuclear Speck
Nucleic Acid Binding
Nucleobase-containing Compound Metabolic Process
Spliceosomal Complex Assembly
Regulation Of MRNA Metabolic Process
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Protein-RNA Complex Assembly
Macromolecule Metabolic Process
MRNA Binding
U2-type Precatalytic Spliceosome
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Metabolic Process
U12-type Spliceosomal Complex
Negative Regulation Of RNA Splicing
U2-type Spliceosomal Complex
Positive Regulation Of RNA Splicing
Precatalytic Spliceosome
U1 SnRNP
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Ribonucleoprotein Complex
Negative Regulation Of RNA Metabolic Process
Protein-containing Complex Assembly
U2-type Prespliceosome Assembly
Regulation Of Nucleobase-containing Compound Metabolic Process
U2 SnRNP
Commitment Complex
Positive Regulation Of Viral Genome Replication
Pre-mRNA 3'-splice Site Binding
U2AF Complex
MRNA Splice Site Recognition
Regulation Of RNA Metabolic Process
Protein-containing Complex Organization
MRNA 5'-splice Site Recognition
T Cell Differentiation In Thymus
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Processing
RNA Splicing, Via Transesterification Reactions
Nuclear Speck
Spliceosomal Complex
RNA Binding
MRNA Splicing, Via Spliceosome
Regulation Of RNA Splicing
RNA Metabolic Process
Nucleic Acid Binding
Nucleic Acid Metabolic Process
Nucleus
Regulation Of MRNA Splicing, Via Spliceosome
Pre-mRNA 3'-splice Site Binding
RS Domain Binding
U2AF Complex
Regulation Of MRNA Processing
Nucleobase-containing Compound Metabolic Process
U2-type Prespliceosome
U1 SnRNP
MRNA Binding
Regulation Of MRNA Metabolic Process
Protein-RNA Complex Assembly
U1 SnRNP Binding
Spliceosomal Complex Assembly
U2-type Precatalytic Spliceosome
NSL Complex
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Nucleoplasm
Precatalytic Spliceosome
Negative Regulation Of MRNA Splicing, Via Spliceosome
Histone Acetyltransferase Complex
U2-type Prespliceosome Assembly
Negative Regulation Of RNA Splicing
U2 SnRNP
Protein Serine/threonine/tyrosine Kinase Activity
MLL1 Complex
Histone H3Q5ser Reader Activity
MRNA Splice Site Recognition
Macromolecule Metabolic Process
Negative Regulation Of Protein Refolding
Histone H3K4me1 Reader Activity
HSP90-CDC37 Chaperone Complex
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?