RNF34 and NOD1

Number of citations of the paper that reports this interaction (PMID 25012219)
0

Data Source:
BioGRID (pull down)

		RNF34	NOD1
Gene Name		ring finger protein 34, E3 ubiquitin protein ligase	nucleotide-binding oligomerization domain containing 1
Image		No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleus Cytoplasm Cytosol Plasma Membrane Endomembrane System Nuclear Speck	Cytoplasm Cytosol Basolateral Plasma Membrane Apical Plasma Membrane
	Molecular Function	P53 Binding Protein Binding Zinc Ion Binding Ligase Activity Ubiquitin Protein Ligase Binding Ubiquitin Protein Ligase Activity Phosphatidylinositol Phosphate Binding	Protein Binding ATP Binding Cysteine-type Endopeptidase Activator Activity Involved In Apoptotic Process Identical Protein Binding Protein Homodimerization Activity Peptidoglycan Binding CARD Domain Binding
	Biological Process	Protein Ubiquitination Nucleotide-binding Domain, Leucine Rich Repeat Containing Receptor Signaling Pathway Protein Ubiquitination Involved In Ubiquitin-dependent Protein Catabolic Process Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Cellular Response To Cold Protein K48-linked Ubiquitination Negative Regulation Of Signal Transduction By P53 Class Mediator Negative Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors Regulation Of Oxygen Metabolic Process Negative Regulation Of Cysteine-type Endopeptidase Activity Involved In Execution Phase Of Apoptosis	Activation Of MAPK Activity Toll-like Receptor Signaling Pathway Positive Regulation Of Dendritic Cell Antigen Processing And Presentation MyD88-dependent Toll-like Receptor Signaling Pathway MyD88-independent Toll-like Receptor Signaling Pathway Apoptotic Process Activation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Defense Response Inflammatory Response Signal Transduction JNK Cascade Detection Of Biotic Stimulus Detection Of Bacterium Positive Regulation Of Interleukin-6 Production Positive Regulation Of Tumor Necrosis Factor Production Toll-like Receptor 2 Signaling Pathway Toll-like Receptor 3 Signaling Pathway Toll-like Receptor 4 Signaling Pathway Toll-like Receptor 5 Signaling Pathway Toll-like Receptor 9 Signaling Pathway Toll-like Receptor 10 Signaling Pathway Intracellular Signal Transduction TRIF-dependent Toll-like Receptor Signaling Pathway Nucleotide-binding Domain, Leucine Rich Repeat Containing Receptor Signaling Pathway Toll-like Receptor TLR1:TLR2 Signaling Pathway Toll-like Receptor TLR6:TLR2 Signaling Pathway Interleukin-8 Biosynthetic Process Defense Response To Bacterium Positive Regulation Of I-kappaB Kinase/NF-kappaB Signaling Positive Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Innate Immune Response Positive Regulation Of JNK Cascade Defense Response To Gram-positive Bacterium Positive Regulation Of NF-kappaB Transcription Factor Activity Protein Oligomerization Stress-activated MAPK Cascade Positive Regulation Of ERK1 And ERK2 Cascade Nucleotide-binding Oligomerization Domain Containing Signaling Pathway
Pathways		Antigen processing: Ubiquitination & Proteasome degradation Class I MHC mediated antigen processing & presentation Adaptive Immune System	Toll Like Receptor 7/8 (TLR7/8) Cascade Toll Like Receptor TLR6:TLR2 Cascade Toll Like Receptor TLR1:TLR2 Cascade Activated TLR4 signalling MyD88 cascade initiated on plasma membrane Toll Like Receptor 5 (TLR5) Cascade NOD1/2 Signaling Pathway MyD88 dependent cascade initiated on endosome MyD88:Mal cascade initiated on plasma membrane TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation Toll Like Receptor 9 (TLR9) Cascade Innate Immune System JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 activated TAK1 mediates p38 MAPK activation TRIF-mediated TLR3/TLR4 signaling MAP kinase activation in TLR cascade Cytokine Signaling in Immune system MyD88-independent cascade Toll Like Receptor 2 (TLR2) Cascade Signaling by Interleukins Toll-Like Receptors Cascades Toll Like Receptor 10 (TLR10) Cascade Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways Toll Like Receptor 4 (TLR4) Cascade Toll Like Receptor 3 (TLR3) Cascade Interleukin-1 signaling TAK1 activates NFkB by phosphorylation and activation of IKKs complex
Drugs
Diseases
GWAS
Protein-Protein Interactions		9 interactors: APP APPBP2 DNAJA3 NOD1 PHF7 TRIM23 UBE2D2 UBE2F UBE2H	12 interactors: CARD6 CASP1 CASP2 CASP4 CASP8 CASP9 GABRB1 NLRP1 RIPK2 RNF34 SOX8 XIAP
Entrez ID		80196	10392
HPRD ID		10509	05815
Ensembl ID		ENSG00000170633	ENSG00000106100
Uniprot IDs		Q969K3	Q9Y239
PDB IDs			2B1W 2DBD 2NSN 2NZ7 4E9M
Enriched GO Terms of Interacting Partners?		Positive Regulation Of Peptidase Activity Protein Modification By Small Protein Conjugation Regulation Of Innate Immune Response Protein K48-linked Ubiquitination Nucleotide-binding Domain, Leucine Rich Repeat Containing Receptor Signaling Pathway Innate Immune Response Positive Regulation Of Proteolysis Neuromuscular Junction Development TRIF-dependent Toll-like Receptor Signaling Pathway MyD88-independent Toll-like Receptor Signaling Pathway Toll-like Receptor 3 Signaling Pathway Regulation Of Endopeptidase Activity Protein Metabolic Process Regulation Of Peptidase Activity Toll-like Receptor 4 Signaling Pathway Interleukin-8 Biosynthetic Process Activation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Activation Of Cysteine-type Endopeptidase Activity Immune Response Zymogen Activation Defense Response Toll-like Receptor Signaling Pathway Synaptic Growth At Neuromuscular Junction Positive Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Protein Ubiquitination Positive Regulation Of Cysteine-type Endopeptidase Activity Cellular Protein Metabolic Process Pattern Recognition Receptor Signaling Pathway Positive Regulation Of Endopeptidase Activity Innate Immune Response-activating Signal Transduction Positive Regulation Of Catalytic Activity Collateral Sprouting In Absence Of Injury Activation Of Innate Immune Response Regulation Of Proteolysis Interleukin-8 Production Protein Polyubiquitination Synapse Organization Regulation Of Protein Kinase Activity Collateral Sprouting Axon Midline Choice Point Recognition Positive Regulation Of Innate Immune Response Cellular Protein Modification Process Regulation Of Kinase Activity Smooth Endoplasmic Reticulum Calcium Ion Homeostasis Negative Regulation Of Interferon-gamma-mediated Signaling Pathway Intracellular Receptor Signaling Pathway Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Regulation Of Cysteine-type Endopeptidase Activity Axon Choice Point Recognition Activation-induced Cell Death Of T Cells	Regulation Of Apoptotic Process Apoptotic Process Regulation Of Cell Death Programmed Cell Death Cell Death Death Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Regulation Of Cysteine-type Endopeptidase Activity Nucleotide-binding Domain, Leucine Rich Repeat Containing Receptor Signaling Pathway Regulation Of Endopeptidase Activity Regulation Of Peptidase Activity Regulation Of Proteolysis Intracellular Receptor Signaling Pathway Execution Phase Of Apoptosis Protein Processing Activation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Activation Of Cysteine-type Endopeptidase Activity Zymogen Activation Positive Regulation Of Apoptotic Process Positive Regulation Of Programmed Cell Death Positive Regulation Of Cell Death Positive Regulation Of Cysteine-type Endopeptidase Activity Involved In Apoptotic Process Positive Regulation Of Cysteine-type Endopeptidase Activity Positive Regulation Of Endopeptidase Activity Positive Regulation Of Peptidase Activity Intrinsic Apoptotic Signaling Pathway Regulation Of Protein Metabolic Process Response To Bacterium Regulation Of Catalytic Activity Cellular Response To Mechanical Stimulus Positive Regulation Of Cellular Protein Metabolic Process Regulation Of Inflammatory Response Positive Regulation Of Proteolysis Signal Transduction Response To Lipopolysaccharide Positive Regulation Of Protein Metabolic Process Regulation Of Cellular Protein Metabolic Process Response To Cobalt Ion Response To Other Organism Response To Molecule Of Bacterial Origin Apoptotic Signaling Pathway Response To Biotic Stimulus Signaling Cell Communication Innate Immune Response Response To Muramyl Dipeptide Positive Regulation Of Interleukin-1 Beta Secretion Response To Organic Cyclic Compound Proteolysis Positive Regulation Of Interleukin-1 Secretion
Tagcloud ?		aims blotting candidate confirm diaminopimelic downregulated e3 glutamyl glutathione gst hybrid immunoprecipitation interfering ip kappa ligase meso nod1 nucleotide oligomerization partner promoted pull regulator regulatory transfection transferase ubiquitination yeast	bacterium boosted causative challenge chicken clostridium commercially consequently dosage enteritis gram initiated inos intense intestinal necrotic nitric oligomerization p65 pathogen peptidoglycan perfringens pgn stimulators synthase toll toxin virulence wall
Tagcloud (Difference) ?		aims blotting candidate confirm diaminopimelic downregulated e3 glutamyl glutathione gst hybrid immunoprecipitation interfering ip kappa ligase meso nucleotide partner promoted pull regulator regulatory transfection transferase ubiquitination yeast	bacterium boosted causative challenge chicken clostridium commercially consequently dosage enteritis gram initiated inos intense intestinal necrotic nitric p65 pathogen peptidoglycan perfringens pgn stimulators synthase toll toxin virulence wall
Tagcloud (Intersection) ?		nod1 oligomerization