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CDX2 and SMARCD1
Number of citations of the paper that reports this interaction (PMID
19371634
)
11
Data Source:
BioGRID
(pull down)
CDX2
SMARCD1
Gene Name
caudal type homeobox 2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
Image
No pdb structure
No pdb structure
Gene Ontology Annotations
Cellular Component
Condensed Nuclear Chromosome
Nucleoplasm
Transcriptional Repressor Complex
SWI/SNF Complex
NpBAF Complex
NBAF Complex
Molecular Function
RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding Transcription Factor Activity Involved In Negative Regulation Of Transcription
Double-stranded DNA Binding
Sequence-specific DNA Binding Transcription Factor Activity
Transcription Corepressor Activity
Transcription Coactivator Activity
Protein Binding
Protein Complex Scaffold
Biological Process
Negative Regulation Of Transcription From RNA Polymerase II Promoter
Blood Vessel Development
Trophectodermal Cell Differentiation
Transcription From RNA Polymerase II Promoter
Positive Regulation Of Cell Proliferation
Endosome To Lysosome Transport
Organ Morphogenesis
Anterior/posterior Pattern Specification
Somatic Stem Cell Maintenance
Establishment Or Maintenance Of Epithelial Cell Apical/basal Polarity
Positive Regulation Of Cell Differentiation
Positive Regulation Of Transcription, DNA-templated
Labyrinthine Layer Development
Nucleosome Disassembly
Chromatin Remodeling
Regulation Of Transcription From RNA Polymerase II Promoter
Nervous System Development
Chromatin-mediated Maintenance Of Transcription
Pathways
Peptide hormone metabolism
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)
Incretin synthesis, secretion, and inactivation
Chromatin modifying enzymes
Chromatin organization
RMTs methylate histone arginines
Drugs
Diseases
GWAS
Protein-Protein Interactions
13 interactors:
ACAT2
CDK2
CREBBP
EP300
GSK3B
HNF1A
MAPK1
MAPK14
PAX6
SMARCA4
SMARCB1
SMARCD1
UBB
44 interactors:
ANP32B
APOA5
AR
C4BPA
CALCOCO2
CCDC85B
CDC5L
CDX2
CORO1A
DPF3
EGFL7
ESR1
FEZ1
FOS
GATA1
GCC1
HNRNPC
HSPB1
IGKC
JUN
KDM1A
KLF1
KRT15
KRT18
LDOC1
MED4
NME1
NONO
NR1H4
NR3C1
NUCB2
PAICS
PCBD1
PGR
PRDX1
PRMT6
RIF1
RPS29
SUV420H1
TNIP2
TP53
USHBP1
VPS37B
YWHAG
Entrez ID
1045
6602
HPRD ID
02622
03438
Ensembl ID
ENSG00000066117
Uniprot IDs
Q99626
Q96GM5
PDB IDs
Enriched GO Terms of Interacting Partners
?
Positive Regulation Of Transcription, DNA-templated
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Gene Expression
Positive Regulation Of Cellular Biosynthetic Process
Positive Regulation Of Cellular Metabolic Process
Positive Regulation Of Transcription From RNA Polymerase II Promoter
Positive Regulation Of Metabolic Process
Regulation Of Cellular Response To Heat
Regulation Of Transcription From RNA Polymerase II Promoter
Chromatin Modification
Regulation Of Sequence-specific DNA Binding Transcription Factor Activity
Regulation Of Transcription, DNA-templated
Positive Regulation By Host Of Viral Transcription
Regulation Of Nucleic Acid-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of RNA Metabolic Process
Chromatin Organization
Cellular Response To Heat
Nucleosome Disassembly
Regulation Of Gene Expression
Regulation Of Nitrogen Compound Metabolic Process
Cell Cycle
Developmental Process
Cellular Response To Stress
Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia
Organ Morphogenesis
Response To Heat
Chromosome Organization
Transcription, DNA-templated
Regulation Of Wnt Signaling Pathway
Cell Cycle Process
RNA Biosynthetic Process
Anatomical Structure Morphogenesis
Interaction With Symbiont
Nucleobase-containing Compound Metabolic Process
N-terminal Peptidyl-lysine Acetylation
Embryo Development
Response To Stress
Multicellular Organismal Development
Cellular Macromolecule Biosynthetic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Macromolecule Biosynthetic Process
Anatomical Structure Development
Negative Regulation Of Transcription From RNA Polymerase II Promoter
Chordate Embryonic Development
Embryo Development Ending In Birth Or Egg Hatching
Positive Regulation Of Viral Transcription
Cellular Nitrogen Compound Metabolic Process
Innate Immune Response
RNA Biosynthetic Process
Gene Expression
Transcription, DNA-templated
RNA Metabolic Process
Nucleobase-containing Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Cellular Macromolecule Biosynthetic Process
Positive Regulation Of Cellular Biosynthetic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Macromolecule Biosynthetic Process
Biosynthetic Process
Regulation Of Apoptotic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Nitrogen Compound Metabolic Process
Regulation Of Cell Death
Positive Regulation Of Transcription, DNA-templated
Positive Regulation Of Gene Expression
Chromatin Organization
Regulation Of Gene Expression
Cellular Response To Organic Substance
Response To Organic Substance
Developmental Process
Regulation Of Transcription, DNA-templated
Regulation Of Nucleic Acid-templated Transcription
Positive Regulation Of Cellular Metabolic Process
Regulation Of RNA Biosynthetic Process
Regulation Of Metabolic Process
Intracellular Steroid Hormone Receptor Signaling Pathway
Regulation Of RNA Metabolic Process
Anatomical Structure Development
Transcription From RNA Polymerase II Promoter
System Development
Negative Regulation Of Apoptotic Process
Negative Regulation Of Programmed Cell Death
Transcription Initiation From RNA Polymerase II Promoter
Steroid Hormone Mediated Signaling Pathway
Negative Regulation Of Cell Death
Chromosome Organization
Positive Regulation Of Transcription From RNA Polymerase II Promoter
Regulation Of Nitrogen Compound Metabolic Process
Intracellular Receptor Signaling Pathway
Positive Regulation Of Metabolic Process
Multicellular Organismal Development
DNA-templated Transcription, Initiation
Hormone-mediated Signaling Pathway
Regulation Of Cell Proliferation
Cellular Response To Hormone Stimulus
Regulation Of Cellular Process
Chromatin Modification
Tagcloud
?
blastocyst
blastocysts
buffalo
caspase3
caspase6
caspase7
cleave
cleaving
cloning
competence
developmental
dnmt1
dnmt3a
ec
embryos
epigenetics
h3k27me3
h3k9ac
handmade
hdac1
hmc
ivf
lc
nanog
oct4
pluripotency
produced
sox2
trophectoderm
Tagcloud (Difference)
?
blastocyst
blastocysts
buffalo
caspase3
caspase6
caspase7
cleave
cleaving
cloning
competence
developmental
dnmt1
dnmt3a
ec
embryos
epigenetics
h3k27me3
h3k9ac
handmade
hdac1
hmc
ivf
lc
nanog
oct4
pluripotency
produced
sox2
trophectoderm
Tagcloud (Intersection)
?