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SRSF1 and SCAF11
Number of citations of the paper that reports this interaction (PubMedID
9447963
)
80
Data Source:
HPRD
(two hybrid)
SRSF1
SCAF11
Description
serine and arginine rich splicing factor 1
SR-related CTD associated factor 11
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nuclear Envelope
Nucleoplasm
Spliceosomal Complex
Cytoplasm
Nuclear Speck
Exon-exon Junction Complex
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Nucleolus
Nuclear Body
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
Protein Kinase B Binding
DNA Topoisomerase Binding
RS Domain Binding
RNA Binding
Protein Binding
Zinc Ion Binding
Metal Ion Binding
Biological Process
Alternative MRNA Splicing, Via Spliceosome
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA 5'-splice Site Recognition
MRNA Splicing, Via Spliceosome
In Utero Embryonic Development
MRNA Splice Site Recognition
MRNA Processing
RNA Splicing
Signal Transduction Involved In Regulation Of Gene Expression
Positive Regulation Of RNA Splicing
Protein Localization To Nucleus
Regulation Of RNA Splicing
MRNA Stabilization
Oligodendrocyte Differentiation
MRNA Transport
Cardiac Muscle Contraction
Cellular Response To Interleukin-17
Interleukin-17-mediated Signaling Pathway
Liver Regeneration
Protein Localization To P-body
Spliceosomal Complex Assembly
RNA Splicing, Via Transesterification Reactions
MRNA Processing
RNA Splicing
Pathways
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA 3'-end processing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription Termination
Drugs
Copper
Diseases
GWAS
Gut microbiota (bacterial taxa, hurdle binary method) (
32572223
)
Coronary artery disease (
29212778
)
Fish- and plant-related diet (
32066663
)
Hemoglobin levels (
32327693
)
Morning person (
30696823
)
Multiple sclerosis (
31604244
)
Parkinson's disease or first degree relation to individual with Parkinson's disease (
31701892
)
Refractive error (
32231278
)
Interacting Genes
53 interacting genes:
AKAP17A
APP
BCL10
C1QBP
CACNA1A
CD8A
CDC42
CDK12
CDK13
CDK6
CDR1
CLK1
CLK2
CLK3
CLK4
CPSF7
DANCR
DIDO1
DYRK1A
FOXP1
GEMIN2
HIPK3
HNRNPA0
LNX1
LUC7L
LUC7L3
NFYA
NXF1
PPARG
PRKN
PRMT1
PRP4K
PRPF4
PSIP1
RNF10
RNPS1
SCAF11
SNRNP70
SREK1
SRPK1
SRPK2
SRSF10
SRSF11
SRSF5
TCERG1
TNPO3
TOP1
TP53
U2AF1
U2AF2
XBP1
YTHDC1
ZRSR2
12 interacting genes:
ATXN1L
PSEN1
RNF10
SNRNP70
SRPK1
SRSF1
SRSF2
SRSF3
SRSF4
STAT3
SUMO2
U2AF2
Entrez ID
6426
9169
HPRD ID
02887
04720
Ensembl ID
ENSG00000136450
ENSG00000139218
Uniprot IDs
Q07955
Q59FA2
F8VXG7
Q99590
PDB IDs
1X4A
2M7S
2M8D
2O3D
3BEG
4C0O
6HPJ
7ABG
8QO9
Enriched GO Terms of Interacting Partners
?
MRNA Metabolic Process
RNA Splicing
MRNA Processing
Nuclear Speck
RNA Metabolic Process
RNA Processing
Nucleic Acid Metabolic Process
Regulation Of RNA Splicing
Nucleobase-containing Compound Metabolic Process
Nucleus
Protein-RNA Complex Assembly
RNA Binding
RNA Splicing, Via Transesterification Reactions
Nucleoplasm
Regulation Of MRNA Splicing, Via Spliceosome
Macromolecule Metabolic Process
Regulation Of MRNA Processing
Protein Serine/threonine Kinase Activity
MRNA Splicing, Via Spliceosome
Protein Serine Kinase Activity
MRNA Splice Site Recognition
Nucleic Acid Binding
Protein-containing Complex Assembly
Regulation Of MRNA Metabolic Process
Spliceosomal Complex
MRNA Binding
Negative Regulation Of MRNA Splicing, Via Spliceosome
Spliceosomal Complex Assembly
Protein-containing Complex Organization
Negative Regulation Of RNA Splicing
Protein Serine/threonine/tyrosine Kinase Activity
Protein Kinase Activity
Regulation Of RNA Metabolic Process
Regulation Of Gene Expression
U2-type Prespliceosome
Regulation Of Macromolecule Biosynthetic Process
Kinase Activity
Regulation Of Primary Metabolic Process
Positive Regulation Of Gene Expression
Pre-mRNA 3'-splice Site Binding
RS Domain Binding
U2AF Complex
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of MRNA Metabolic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Positive Regulation Of Macromolecule Biosynthetic Process
Protein Tyrosine Kinase Activity
Identical Protein Binding
RNA Polymerase II CTD Heptapeptide Repeat Kinase Activity
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
Regulation Of RNA Splicing
Regulation Of MRNA Metabolic Process
RNA Splicing
MRNA Metabolic Process
Nuclear Speck
MRNA Processing
RNA Binding
Regulation Of RNA Metabolic Process
RNA Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Macromolecule Metabolic Process
Regulation Of Primary Metabolic Process
Nucleus
MRNA Binding
RNA Processing
Nucleic Acid Binding
Regulation Of Macromolecule Metabolic Process
Nucleic Acid Metabolic Process
Positive Regulation Of RNA Splicing
Postsynapse To Nucleus Signaling Pathway
Regulation Of Metabolic Process
Nucleoplasm
Cellular Response To Interleukin-17
RNA Splicing, Via Transesterification Reactions
Primary MiRNA Binding
Nucleobase-containing Compound Metabolic Process
Negative Regulation Of RNA Metabolic Process
Response To Cytokine
Sequence-specific MRNA Binding
Response To Peptide
Negative Regulation Of MRNA Metabolic Process
U2-type Prespliceosome
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of Generation Of Precursor Metabolites And Energy
Negative Regulation Of Catabolic Process
Negative Regulation Of RNA Splicing
Cellular Response To Cytokine Stimulus
Negative Regulation Of Macromolecule Metabolic Process
Spliceosomal Complex
Positive Regulation Of ATP Metabolic Process
Signal Transduction Involved In Regulation Of Gene Expression
Protein-RNA Complex Assembly
MRNA Splicing, Via Spliceosome
Negative Regulation Of Metabolic Process
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