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MKRN1 and EXOSC8
Number of citations of the paper that reports this interaction (PMID
15231747
)
44
Data Source:
HPRD
(two hybrid)
MKRN1
EXOSC8
Gene Name
makorin ring finger protein 1
exosome component 8
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Cellular_component
Exosome (RNase Complex)
Nucleus
Nucleolus
Cytoplasm
Cytosol
Molecular Function
Chromatin Binding
Ubiquitin-protein Transferase Activity
Protein Binding
Zinc Ion Binding
Ligase Activity
Poly(A) RNA Binding
Exoribonuclease Activity
Protein Binding
AU-rich Element Binding
Biological Process
Protein Polyubiquitination
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RRNA Processing
Biological_process
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Pathways
Antigen processing: Ubiquitination & Proteasome degradation
Class I MHC mediated antigen processing & presentation
Adaptive Immune System
Regulation of mRNA stability by proteins that bind AU-rich elements
KSRP destabilizes mRNA
mRNA decay by 3' to 5' exoribonuclease
ATF4 activates genes
Tristetraprolin (TTP) destabilizes mRNA
PERK regulates gene expression
Unfolded Protein Response (UPR)
Deadenylation-dependent mRNA decay
Butyrate Response Factor 1 (BRF1) destabilizes mRNA
Drugs
Diseases
GWAS
Protein-Protein Interactions
7 interactors:
CSNK1G1
DUSP23
EXOSC8
FADD
MAP1LC3B
UBE2D3
UBE2W
42 interactors:
AEN
ATF2
COL23A1
COX5A
CRMP1
CWC22
DIS3
DUSP23
EXOSC1
EXOSC10
EXOSC2
EXOSC3
EXOSC4
EXOSC5
EXOSC6
EXOSC7
EXOSC9
FAM90A1
FHOD1
FOXN3
FRG1
LSM1
LSM7
MKRN1
MORN4
MPP6
OTUD4
RASSF1
REL
RPP14
SKIV2L2
SNRPC
TCEA2
TFAP4
TXNDC17
TXNDC9
UBC
UPF2
USP6
XRN1
XRN2
ZFP36
Entrez ID
23608
11340
HPRD ID
09673
09351
Ensembl ID
ENSG00000133606
ENSG00000120699
Uniprot IDs
Q9UHC7
Q96B26
PDB IDs
2NN6
Enriched GO Terms of Interacting Partners
?
Protein K11-linked Ubiquitination
Protein Monoubiquitination
TRIF-dependent Toll-like Receptor Signaling Pathway
MyD88-independent Toll-like Receptor Signaling Pathway
Toll-like Receptor 3 Signaling Pathway
Toll-like Receptor 4 Signaling Pathway
Positive Regulation Of CD8-positive, Alpha-beta Cytotoxic T Cell Extravasation
Toll-like Receptor Signaling Pathway
Motor Neuron Apoptotic Process
Regulation Of CD8-positive, Alpha-beta Cytotoxic T Cell Extravasation
Positive Regulation Of CD8-positive, Alpha-beta T Cell Extravasation
Pattern Recognition Receptor Signaling Pathway
Innate Immune Response-activating Signal Transduction
Activation Of Innate Immune Response
TRAIL-activated Apoptotic Signaling Pathway
Catabolic Process
Protein Polyubiquitination
Positive Regulation Of Innate Immune Response
Cellular Macromolecule Catabolic Process
Necroptotic Signaling Pathway
Positive Regulation Of Cellular Extravasation
Regulation Of Innate Immune Response
Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process
Proteasomal Protein Catabolic Process
Positive Regulation Of Macrophage Differentiation
Negative Regulation Of Activation-induced Cell Death Of T Cells
Positive Regulation Of Type I Interferon-mediated Signaling Pathway
Regulation Of Activation-induced Cell Death Of T Cells
Misfolded Or Incompletely Synthesized Protein Catabolic Process
Cellular Response To Misfolded Protein
Negative Regulation Of Necroptotic Process
Response To Misfolded Protein
Cellular Response To Nitrogen Starvation
Lymph Node Development
Negative Regulation Of Necrotic Cell Death
Regulation Of Necroptotic Process
Positive Regulation Of T Cell Migration
Regulation Of T Cell Migration
Nucleophagy
Positive Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors
Positive Regulation Of Activated T Cell Proliferation
Regulation Of Necrotic Cell Death
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia
Cellular Response To Stress
Immune Response-regulating Signaling Pathway
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Cellular Protein Modification Process
Negative Regulation Of T Cell Apoptotic Process
Mitochondrion Degradation
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RNA Catabolic Process
Nuclear-transcribed MRNA Catabolic Process
MRNA Catabolic Process
MRNA Metabolic Process
RRNA Metabolic Process
RRNA Processing
RNA Phosphodiester Bond Hydrolysis, Exonucleolytic
Ribosome Biogenesis
Aromatic Compound Catabolic Process
Nuclear MRNA Surveillance
Ribonucleoprotein Complex Biogenesis
RNA Metabolic Process
Cellular Macromolecule Catabolic Process
NcRNA Metabolic Process
RNA Surveillance
RNA Phosphodiester Bond Hydrolysis
RRNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
Nucleic Acid Phosphodiester Bond Hydrolysis
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Maturation Of 5.8S RRNA
Gene Expression
Cellular Nitrogen Compound Metabolic Process
Catabolic Process
Nitrogen Compound Metabolic Process
Nuclear Polyadenylation-dependent RRNA Catabolic Process
CUT Catabolic Process
DNA Deamination
Histone MRNA Catabolic Process
RNA Processing
Cellular Metabolic Process
Histone MRNA Metabolic Process
MRNA Processing
Intracellular MRNA Localization
Metabolic Process
Nuclear Polyadenylation-dependent TRNA Catabolic Process
Polyadenylation-dependent SnoRNA 3'-end Processing
Nuclear Retention Of Pre-mRNA With Aberrant 3'-ends At The Site Of Transcription
U4 SnRNA 3'-end Processing
TRNA Catabolic Process
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic, 3'-5'
DNA Modification
Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA)
RNA Splicing
SnoRNA Metabolic Process
RNA Splicing, Via Transesterification Reactions
Tagcloud
?
apathogenic
aspects
cap
circovirus
gc1qr
genotypes
hsp40
hybrid
immunofluorescence
interacting
lifecycle
localisation
nap1
npm1
others
overlapping
par
pathogen
pcv
pcv1
pcv2
porcine
prominent
redistribution
rep
swine
tdg
vg5q
znf265
Tagcloud (Difference)
?
apathogenic
aspects
cap
circovirus
gc1qr
genotypes
hsp40
hybrid
immunofluorescence
interacting
lifecycle
localisation
nap1
npm1
others
overlapping
par
pathogen
pcv
pcv1
pcv2
porcine
prominent
redistribution
rep
swine
tdg
vg5q
znf265
Tagcloud (Intersection)
?