HDAC4 and ATRX

Number of citations of the paper that reports this interaction (PMID 15964851)
5

Data Source:
HPRD (two hybrid)

		HDAC4	ATRX
Gene Name		histone deacetylase 4	alpha thalassemia/mental retardation syndrome X-linked
Image
Gene Ontology Annotations	Cellular Component	Histone Deacetylase Complex Nucleus Nucleoplasm Cytoplasm Cytosol Transcriptional Repressor Complex Z Disc Neuromuscular Junction A Band Actomyosin	Nucleus Nucleoplasm Nuclear Heterochromatin PML Body Telomeric Heterochromatin SWI/SNF Superfamily-type Complex
	Molecular Function	Core Promoter Binding Transcription Corepressor Activity Histone Deacetylase Activity Protein Binding Transcription Factor Binding Zinc Ion Binding Protein Kinase Binding Potassium Ion Binding NAD-dependent Histone Deacetylase Activity (H3-K14 Specific) Protein Deacetylase Activity Activating Transcription Factor Binding Histone Deacetylase Binding Sequence-specific DNA Binding Transcription Regulatory Region DNA Binding NAD-dependent Histone Deacetylase Activity (H3-K9 Specific) NAD-dependent Histone Deacetylase Activity (H4-K16 Specific) Repressing Transcription Factor Binding NAD-dependent Histone Deacetylase Activity (H3-K18 Specific)	DNA Binding DNA Helicase Activity Chromatin Binding Helicase Activity Protein Binding ATP Binding Zinc Ion Binding DNA Translocase Activity Methylated Histone Binding Histone Binding Chromo Shadow Domain Binding
	Biological Process	Negative Regulation Of Transcription From RNA Polymerase II Promoter Skeletal System Development Osteoblast Development Chromatin Remodeling Transcription, DNA-templated Inflammatory Response Nervous System Development Positive Regulation Of Cell Proliferation Negative Regulation Of Cell Proliferation Negative Regulation Of Myotube Differentiation Regulation Of Cardiac Muscle Contraction By Calcium Ion Signaling Response To Denervation Involved In Regulation Of Muscle Adaptation Cardiac Muscle Hypertrophy In Response To Stress Histone Deacetylation B Cell Differentiation Positive Regulation Of Protein Sumoylation Peptidyl-lysine Deacetylation Regulation Of Gene Expression, Epigenetic B Cell Activation Response To Drug Regulation Of Protein Binding Negative Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Negative Regulation Of Osteoblast Differentiation Negative Regulation Of Glycolytic Process Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Skeletal Muscle Fiber Development Positive Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Histone H3-K9 Modification Response To Interleukin-1 Histone H3 Deacetylation Histone H4 Deacetylation	DNA Repair DNA Methylation DNA Recombination Nucleosome Assembly DNA Replication-independent Nucleosome Assembly Chromatin Remodeling Transcription, DNA-templated Regulation Of Transcription, DNA-templated Spermatogenesis Positive Regulation Of Nuclear Cell Cycle DNA Replication DNA Damage Response, Signal Transduction By P53 Class Mediator Forebrain Development Replication Fork Processing Positive Regulation Of Telomere Maintenance DNA Duplex Unwinding Positive Regulation Of Transcription From RNA Polymerase II Promoter Sertoli Cell Development Seminiferous Tubule Development Cellular Response To Hydroxyurea Negative Regulation Of Telomeric RNA Transcription From RNA Pol II Promoter
Pathways		Signaling by NOTCH1 HD Domain Mutants in Cancer Signaling by NOTCH1 HD+PEST Domain Mutants in Cancer Signaling by NOTCH Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant NOTCH1 Intracellular Domain Regulates Transcription Signaling by NOTCH1 Signaling by NOTCH1 PEST Domain Mutants in Cancer Signaling by NOTCH1 in Cancer Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants Constitutive Signaling by NOTCH1 PEST Domain Mutants FBXW7 Mutants and NOTCH1 in Cancer
Drugs
Diseases
GWAS		Autism spectrum disorder, attention deficit-hyperactivity disorder, bipolar disorder, major depressive disorder, and schizophrenia (combined) ( 23453885) Male-pattern baldness ( 22693459) Pulmonary function ( 21946350) Pulmonary function (interaction) ( 23284291)
Protein-Protein Interactions		89 interactors: ACTA1 ANKRA2 ANKRD11 APP AR ATF3 ATRX BCL6 BCOR BRMS1 CACNA1C CAMK2D CAMK4 CBX5 CCDC136 CDKN1A CDR2 CEBPD CIITA CSRP3 CTBP1 EFEMP2 ESR1 GATA1 GCM1 GNB1 GOLGA2 GSK3B HDAC3 HDAC7 HDAC9 HNF4A IFRD1 IKZF2 JDP2 KRT31 KRT38 KRT40 LCOR LDOC1 LZTR1 MAP1S MAPK1 MAPK3 MECOM MEF2A MEF2B MEF2C MEF2D MEGF10 MIF4GD MTUS2 NACC1 NCOR2 NFKB2 NFKBIE NPPB NR1H2 NR2C1 NR2C2 NUP155 PNMA1 PPARD PPARG PPP2R4 RANBP2 RARA RBBP4 REV3L RFXANK RINT1 RUNX2 RUNX3 RUVBL2 RXRA SMAD3 SRF SS18L1 SUMO1 SUMO2 SYK TNFRSF14 UBE2I YWHAE YWHAG YWHAQ YWHAZ ZBTB16 ZNF354A	21 interactors: ATN1 BLM CALM1 CCSER2 DAXX EZH2 HDAC1 HDAC4 HIST1H3A HIST2H3C KIAA1377 LUC7L2 NEK1 NSD1 PTN PTPN4 RAD51 SVIL WRN ZBED1 ZNF512B
Entrez ID		9759	546
HPRD ID		05610	02069
Ensembl ID		ENSG00000068024	ENSG00000085224
Uniprot IDs		B7Z8G5 P56524 Q86YH7	A4LAA3 B4DLW1 P46100
PDB IDs		2H8N 2O94 2VQJ 2VQM 2VQO 2VQQ 2VQV 2VQW 3UXG 3UZD 3V31	2JM1 2LBM 2LD1 3QL9 3QLA 3QLC 3QLN
Enriched GO Terms of Interacting Partners?		Regulation Of Transcription From RNA Polymerase II Promoter RNA Biosynthetic Process Transcription, DNA-templated Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Positive Regulation Of Cellular Metabolic Process Regulation Of RNA Metabolic Process Regulation Of Gene Expression Negative Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Positive Regulation Of Transcription, DNA-templated Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Biosynthetic Process RNA Metabolic Process Positive Regulation Of Cellular Biosynthetic Process Gene Expression Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Gene Expression Negative Regulation Of Cellular Metabolic Process Negative Regulation Of Transcription From RNA Polymerase II Promoter Transcription From RNA Polymerase II Promoter Positive Regulation Of Metabolic Process Nucleobase-containing Compound Metabolic Process Macromolecule Biosynthetic Process Regulation Of Metabolic Process Organ Development Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Response To Organic Substance Cellular Macromolecule Biosynthetic Process Response To Organic Substance Cellular Nitrogen Compound Metabolic Process Regulation Of Cellular Process Biosynthetic Process Nitrogen Compound Metabolic Process Anatomical Structure Development System Development Cell Differentiation Developmental Process Transcription Initiation From RNA Polymerase II Promoter Multicellular Organismal Development DNA-templated Transcription, Initiation Response To Hormone Cellular Response To Hormone Stimulus Cellular Response To Lipid Regulation Of Cellular Localization	Organelle Organization Chromosome Organization Negative Regulation Of Gene Expression, Epigenetic Negative Regulation Of Biosynthetic Process Regulation Of Gene Expression, Epigenetic Negative Regulation Of Transcription, DNA-templated Cellular Response To Camptothecin Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process DNA Conformation Change Negative Regulation Of Cellular Metabolic Process Response To Camptothecin Cellular Response To Radiation Response To Ionizing Radiation Negative Regulation Of Gene Expression Cellular Response To Ionizing Radiation Nucleobase-containing Compound Metabolic Process DNA Methylation Chromatin Organization Nitrogen Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Response To Radiation DNA Duplex Unwinding DNA Geometric Change Response To Stress Cellular Nitrogen Compound Metabolic Process DNA Methylation On Cytosine DNA Modification Regulation Of Cell Division Chromatin Silencing At RDNA Replication Fork Processing Positive Regulation Of Protein Serine/threonine Kinase Activity Cell Cycle DNA-dependent DNA Replication Chromatin Modification Wound Healing Negative Regulation Of Striated Muscle Cell Differentiation Positive Regulation Of Cellular Metabolic Process Regulation Of Metabolic Process Regulation Of Cardiac Muscle Contraction By Calcium Ion Signaling Cell Cycle Process Histone H4 Deacetylation DNA Metabolic Process Regulation Of Nitrogen Compound Metabolic Process Positive Regulation Of Metabolic Process Response To Wounding Gene Expression Double-strand Break Repair Histone Modification
Tagcloud ?		300mg 50mg ameliorated ameliorates ctgf dawley deacetylases dn emphasize fibrogenesis fibronectin fibrosis fibrotic hdacs histology icam microscope migraine myofibroblast nephropathy profibrotic renoprotective route sma sprague stz valproic vpa	12v2 altering banding beadchip bon constitution cytosnp exome frameshift gtg heterozygosity hiseq homozygous ilumina implicating indels lubrication muc neuroendocrine ngs nras ploidy pnet qgp sanger sequenced snvs stretches toolkit
Tagcloud (Difference) ?		300mg 50mg ameliorated ameliorates ctgf dawley deacetylases dn emphasize fibrogenesis fibronectin fibrosis fibrotic hdacs histology icam microscope migraine myofibroblast nephropathy profibrotic renoprotective route sma sprague stz valproic vpa	12v2 altering banding beadchip bon constitution cytosnp exome frameshift gtg heterozygosity hiseq homozygous ilumina implicating indels lubrication muc neuroendocrine ngs nras ploidy pnet qgp sanger sequenced snvs stretches toolkit
Tagcloud (Intersection) ?