Wiki-Pi
About
Search
People
Updates
Search
ATRX and ZBED1
Number of citations of the paper that reports this interaction (PubMedID
22021382
)
52
Data Source:
BioGRID
(affinity chromatography technology, pull down)
ATRX
ZBED1
Description
ATRX chromatin remodeler
zinc finger BED-type containing 1
Image
GO Annotations
Cellular Component
Nuclear Chromosome
Condensed Chromosome, Centromeric Region
Chromosome, Telomeric Region
Heterochromatin
Nucleus
Nucleoplasm
Chromosome
Pericentric Heterochromatin
Nuclear Body
PML Body
Chromosome, Subtelomeric Region
Chromatin
Nucleus
Nucleoplasm
Centrosome
PML Body
Nuclear Membrane
Molecular Function
Nucleotide Binding
DNA Binding
Chromatin Binding
Helicase Activity
Protein Binding
ATP Binding
Zinc Ion Binding
DNA Translocase Activity
Hydrolase Activity
ATP Hydrolysis Activity
Chromatin DNA Binding
Histone Binding
Metal Ion Binding
Histone H3K9me2/3 Reader Activity
Chromo Shadow Domain Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Activator Activity, RNA Polymerase II-specific
DNA Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Protein Binding
Zinc Ion Binding
Transferase Activity
SUMO Transferase Activity
Identical Protein Binding
Sequence-specific DNA Binding
Metal Ion Binding
Protein Dimerization Activity
SUMO Ligase Activity
Sequence-specific Double-stranded DNA Binding
Biological Process
Meiotic Spindle Organization
DNA Repair
Chromatin Organization
Nucleosome Assembly
Chromatin Remodeling
Regulation Of DNA-templated Transcription
Transcription By RNA Polymerase II
DNA Damage Response
Spermatogenesis
Regulation Of Cell Cycle Process
Positive Regulation Of Nuclear Cell Cycle DNA Replication
DNA Damage Response, Signal Transduction By P53 Class Mediator
Forebrain Development
Replication Fork Processing
Subtelomeric Heterochromatin Formation
Positive Regulation Of Telomere Maintenance
Regulation Of Chromosome Organization
Post-embryonic Forelimb Morphogenesis
Multicellular Organism Growth
Positive Regulation Of Transcription By RNA Polymerase II
Sertoli Cell Development
Chromosome Organization Involved In Meiotic Cell Cycle
Protein Localization To Chromosome, Telomeric Region
Seminiferous Tubule Development
Cellular Response To Hydroxyurea
Negative Regulation Of Maintenance Of Mitotic Sister Chromatid Cohesion, Telomeric
Regulation Of DNA-templated Transcription
Regulation Of Transcription By RNA Polymerase II
Protein Sumoylation
Host-mediated Suppression Of Viral Genome Replication
Positive Regulation Of Transcription By RNA Polymerase II
Protein Autosumoylation
Pathways
Inhibition of DNA recombination at telomere
Defective Inhibition of DNA Recombination at Telomere Due to DAXX Mutations
Defective Inhibition of DNA Recombination at Telomere Due to ATRX Mutations
SUMOylation of chromatin organization proteins
Drugs
Diseases
Non-syndromic X-linked mental retardation
Thalassemia; Alpha thalassemia; Beta thalassemia; Alpha thalassemia, X-linked (ATRX)
Syndromic X-linked mental retardation with epilepsy or seizures, including: West syndrome (WS); Partington syndrome (PRTS); Proud syndrome (ACCAG); XMR and epilepsy (XMRE); MRXHF1; XMR OPHN1-related (MRXSO) ; XELBD; XMR, Christianson type (MRXSC); Creatine deficiency syndrome (XL-CDS); Renpenning syndrome (RENS1); Epilepsy and mental retardation limited to females (EFMR); Periventricular nodular heterotopia (PVNH); Hydrocephalus (XLH); XMR, JARID1C related (MRXSJ); Boerjeson-Forssman syndrome (BFLS); CK syndrome (CKS)
46,XY disorders of sex development (Disorders of gonadal development), including: Gonadal agenesis; Complete and partial gonadal dysgenesis; Testis regression; Ovotesticular DSD
GWAS
Platelet count (
32888494
)
Plateletcrit (
32888494
)
Interacting Genes
33 interacting genes:
ATN1
AURKA
BLM
BRD9
CALM1
CBS
CCSER2
CEP126
CLIC6
CREBBP
DAXX
DSCAM
EZH2
H3C14
HDAC1
HDAC4
LUC7L2
MDM2
NEK1
NSD1
PTN
PTPN4
RAD51
RAD51AP1
RASSF1
RBM11
SLX9
SUMO2
SVIL
WRN
ZBED1
ZMYND8
ZNF512B
61 interacting genes:
AIRIM
AMOTL2
ATRX
CBX4
CCDC13
CDC37
CTNNAL1
DGCR6
EFHC1
FABP4
FAM124B
FANCG
FNDC11
GGACT
GORASP2
GPN1
GPSM1
KDM1A
KIFC3
KLHL40
LCN2
LNX1
LRRC20
MAD2L2
MAGEB2
MKKS
MLH1
MPST
MYO15B
NCDN
NIF3L1
NIP7
NTAQ1
NUDT18
PAX6
PIAS1
PIAS2
PICK1
POLE2
POLR1C
PRKAA1
PRKAR1A
PSAP
RANBP9
RENBP
RIN1
SORBS3
SPEF1
SSX2
SUMO1
SUMO2
TDP2
TRAPPC2B
TRIML2
TTC23
TTR
UBE2I
UCHL5
USP2
ZHX1
ZNF451
Entrez ID
546
9189
HPRD ID
02069
02170
Ensembl ID
ENSG00000085224
ENSG00000214717
Uniprot IDs
A4LAA3
B4DLW1
P46100
O96006
PDB IDs
2JM1
2LBM
2LD1
3QL9
3QLA
3QLC
3QLN
4W5A
5GRQ
5Y18
5Y6O
6G0O
2CT5
Enriched GO Terms of Interacting Partners
?
Nucleoplasm
SUMO Transferase Activity
Recombinational Repair
P53 Binding
Double-strand Break Repair Via Homologous Recombination
Cellular Response To Ionizing Radiation
Transcription Corepressor Activity
Nucleus
Cellular Response To Radiation
PML Body
Forked DNA-dependent Helicase Activity
Chromatin Remodeling
Chromatin Organization
Protein Sumoylation
Chromatin
Double-strand Break Repair
Cellular Response To Stress
Chromosome
DNA Recombination
Response To Ionizing Radiation
Regulation Of Cell Cycle Process
8-hydroxy-2'-deoxyguanosine DNA Binding
Telomeric G-quadruplex DNA Binding
Negative Regulation Of Transcription By RNA Polymerase II
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Cell Division
Telomeric D-loop Binding
Y-form DNA Binding
Chromosome, Telomeric Region
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Cellular Response To Gamma Radiation
Centrosome
Cellular Response To Camptothecin
Cellular Response To Alkaloid
Negative Regulation Of RNA Metabolic Process
Regulation Of Primary Metabolic Process
Four-way Junction Helicase Activity
Response To Glycoside
Replication Fork Processing
Telomere Maintenance Via Semi-conservative Replication
Negative Regulation Of Striated Muscle Cell Differentiation
Pronucleus
Positive Regulation Of Metabolic Process
DNA Geometric Change
Bubble DNA Binding
Positive Regulation Of Macromolecule Metabolic Process
DNA Damage Response
Enzyme Binding
Protein Sumoylation
PML Body
SUMO Transferase Activity
SUMO Ligase Activity
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Presynaptic Cytosol
Postsynaptic Cytosol
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of RNA Metabolic Process
Negative Regulation Of Transcription By RNA Polymerase II
Transcription Corepressor Activity
Negative Regulation Of Metabolic Process
Post-translational Protein Modification
Protein Binding
DNA Repair
Ubiquitin Protein Ligase Binding
Organelle Organization
Small Protein Activating Enzyme Binding
Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process
Protein Modification By Small Protein Conjugation
Positive Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Cellular Response To Stress
Nuclear Body
Regulation Of Ubiquitin-dependent Protein Catabolic Process
DNA Damage Response
Protein Modification Process
Nucleoplasm
Enzyme Binding
Error-prone Translesion Synthesis
Positive Regulation Of Ubiquitin-dependent Protein Catabolic Process
Cytoplasm
RNA Polymerase II-specific DNA-binding Transcription Factor Binding
Nucleotide-activated Protein Kinase Complex
Positive Regulation Of Proteasomal Protein Catabolic Process
Regulation Of Proteasomal Protein Catabolic Process
Response To Radiation
Response To Light Stimulus
Regulation Of RNA Metabolic Process
Microtubule Cytoskeleton Organization
Nucleus
DNA Metabolic Process
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?