ATG12 and NLRP6

Number of citations of the paper that reports this interaction (PubMedID 36223738)
0

Data Source:
BioGRID (pull down)

		ATG12	NLRP6
Description		autophagy related 12	NLR family pyrin domain containing 6
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GO Annotations	Cellular Component	Autophagosome Membrane Nucleoplasm Cytoplasm Autophagosome Cytosol Membrane Phagocytic Vesicle Membrane Protein-containing Complex Phagophore Assembly Site Membrane Atg12-Atg5-Atg16 Complex Transferase Complex	Nucleus Cytoplasm Cytosol Plasma Membrane Membrane Nuclear Membrane Membraneless Organelle Canonical Inflammasome Complex NLRP6 Inflammasome Complex
	Molecular Function	Protein Binding Atg8-family Ligase Activity Protein Tag Activity	Nucleotide Binding Lipopolysaccharide Binding Double-stranded RNA Binding Vasopressin Receptor Activity ATP Binding Signaling Adaptor Activity Signaling Receptor Activity Pattern Recognition Receptor Activity Peptide Binding Lipoteichoic Acid Binding Molecular Condensate Scaffold Activity
	Biological Process	Autophagosome Assembly Autophagy Of Mitochondrion Autophagy Macroautophagy Negative Regulation Of Type I Interferon Production Piecemeal Microautophagy Of The Nucleus Negative Regulation Of Innate Immune Response Negative Regulation Of Defense Response To Virus Glycophagy Autophagosome Maturation Regulation Of Autophagosome Maturation Positive Regulation Of Viral Translation	Immune System Process Acute Inflammatory Response To Antigenic Stimulus Acute Inflammatory Response Negative Regulation Of Inflammatory Response To Antigenic Stimulus Inflammatory Response Signal Transduction G Protein-coupled Receptor Signaling Pathway Protein Secretion Response To Bacterium Regulation Of Autophagy Negative Regulation Of Type II Interferon Production Positive Regulation Of Interleukin-1 Beta Production Positive Regulation Of Interleukin-18 Production Negative Regulation Of Toll-like Receptor Signaling Pathway Interleukin-18-mediated Signaling Pathway Wound Healing Negative Regulation Of Canonical NF-kappaB Signal Transduction Negative Regulation Of MAPK Cascade Innate Immune Response Host-mediated Modulation Of Intestinal Microbiota Composition Regulation Of Inflammatory Response Positive Regulation Of Inflammatory Response Negative Regulation Of Immune Response Defense Response To Gram-positive Bacterium Protein Homooligomerization Protein Maturation Defense Response To Virus Regulation Of Mucus Secretion Necroptotic Process Pyroptotic Inflammatory Response Negative Regulation Of ERK1 And ERK2 Cascade Interleukin-1-mediated Signaling Pathway Neutrophil-mediated Killing Of Gram-positive Bacterium Antiviral Innate Immune Response NLRP6 Inflammasome Complex Assembly Positive Regulation Of Interleukin-18-mediated Signaling Pathway
Pathways		Macroautophagy Macroautophagy PINK1-PRKN Mediated Mitophagy Receptor Mediated Mitophagy Negative regulators of DDX58/IFIH1 signaling
Drugs
Diseases
GWAS		Liver enzyme levels (alkaline phosphatase) ( 33972514) Serum alkaline phosphatase levels ( 33547301)	Mean platelet volume ( 22139419) Platelet count ( 22139419) Reticulocyte count ( 32888494)
Interacting Genes		18 interacting genes: APP ATG10 ATG3 ATG5 ATG7 CRX DOCK9 IER2 KRTAP4-12 MDFI MEOX2 NLRP6 PLSCR1 PRKACA PTK2 RB1CC1 SERTAD1 SERTAD2	6 interacting genes: ATG12 ATG16L1 ATG5 BECN1 PIK3R1 SQSTM1
Entrez ID		9140	171389
HPRD ID		08496	14806
Ensembl ID		ENSG00000145782	ENSG00000174885
Uniprot IDs		O94817	P59044
PDB IDs		4GDK 4GDL 4NAW	6NCV 6NDJ
Enriched GO Terms of Interacting Partners?		Autophagy Of Mitochondrion Nucleophagy Autophagosome Assembly Autophagosome Organization Macroautophagy Vacuole Organization Piecemeal Microautophagy Of The Nucleus Atg12 Transferase Activity Negative Regulation Of Phagocytosis Microautophagy Atg8-family Ligase Activity Regulation Of Phagocytosis Phagophore Assembly Site Positive Regulation Of Metabolic Process Defense Response To Virus Autophagy Regulation Of Endocytosis Atg12-Atg5-Atg16 Complex Mitophagy Regulation Of Mucus Secretion Response To Virus Negative Regulation Of Endocytosis Cellular Response To Nitrogen Starvation Cellular Component Assembly Glycophagy Vascular Endothelial Cell Response To Fluid Shear Stress Cytoplasm Cytosol Response To Lead Ion Ubiquitin-like Protein Transferase Activity Glycogen Catabolic Process Regulation Of Vesicle-mediated Transport Phagophore Assembly Site Membrane Positive Regulation Of Catabolic Process Axoneme Polysaccharide Catabolic Process Molecular Function Activator Activity Regulation Of Calcium Ion Transmembrane Transport Regulation Of JNK Cascade Postsynaptic Modulation Of Chemical Synaptic Transmission Cellular Response To Fluid Shear Stress Regulation Of Metabolic Process Regulation Of Autophagy Positive Regulation Of Macromolecule Metabolic Process Amyloid-beta Complex Growth Cone Lamellipodium Regulation Of Toll-like Receptor Signaling Pathway Regulation Of Response To Calcium Ion Amylin Binding Positive Regulation Of Toll Signaling Pathway	Autophagosome Macroautophagy Atg12-Atg5-Atg16 Complex Autophagy Of Mitochondrion Autophagy Autophagosome Assembly Autophagosome Organization Regulation Of Autophagy Phagophore Assembly Site Membrane Microautophagy Regulation Of Innate Immune Response Positive Regulation Of Viral Translation Vacuole Organization Positive Regulation Of Autophagy Atg8-family Ligase Activity Negative Stranded Viral RNA Replication Organelle Assembly Mitophagy Regulation Of Defense Response Response To Mitochondrial Depolarisation Response To Iron(II) Ion Positive Regulation Of Stress Granule Assembly Viral RNA Genome Replication Regulation Of Immune Response Cellular Response To Nitrogen Starvation Regulation Of Stress Granule Assembly Transferase Complex Regulation Of Cellular Component Organization Intracellular Transport Regulation Of Organelle Organization Aggrephagy Regulation Of Autophagosome Maturation Negative Regulation Of Immune System Process Phosphatidylinositol 3-kinase Binding Negative Regulation Of Defense Response To Virus Positive Regulation Of Catabolic Process Piecemeal Microautophagy Of The Nucleus Viral Genome Replication Nucleophagy Regulation Of Macroautophagy Cellular Localization Establishment Of Localization In Cell Regulation Of Immune System Process Phagophore Assembly Site Response To Iron Ion Regulation Of Toll-like Receptor 4 Signaling Pathway GTPase Binding Defense Response To Virus Nucleobase-containing Compound Biosynthetic Process Catabolic Process
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