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DDX39B and NCBP2
Number of citations of the paper that reports this interaction (PMID
17190602
)
119
Data Source:
BioGRID
(pull down)
DDX39B
NCBP2
Gene Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
nuclear cap binding protein subunit 2, 20kDa
Image
Gene Ontology Annotations
Cellular Component
Transcription Export Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
U4 SnRNP
U6 SnRNP
Cytoplasm
Nuclear Speck
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
MRNA Cap Binding Complex
Nuclear Cap Binding Complex
Molecular Function
ATP-dependent RNA Helicase Activity
Protein Binding
ATP Binding
RNA-dependent ATPase Activity
U6 SnRNA Binding
U4 SnRNA Binding
ATP-dependent Protein Binding
Poly(A) RNA Binding
Nucleotide Binding
RNA Cap Binding
RNA 7-methylguanosine Cap Binding
RNA Binding
Protein Binding
Poly(A) RNA Binding
Biological Process
Spliceosomal Complex Assembly
MRNA Splicing, Via Spliceosome
MRNA Export From Nucleus
RNA Splicing
RNA Secondary Structure Unwinding
Positive Regulation Of DNA-templated Transcription, Elongation
Viral MRNA Export From Host Cell Nucleus
Negative Regulation Of DNA Damage Checkpoint
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Transcription From RNA Polymerase II Promoter
Transcription Elongation From RNA Polymerase II Promoter
Termination Of RNA Polymerase II Transcription
7-methylguanosine MRNA Capping
MRNA Export From Nucleus
SnRNA Export From Nucleus
Regulation Of Translational Initiation
Histone MRNA Metabolic Process
RNA Splicing
Gene Expression
Viral Process
Gene Silencing By RNA
MRNA 3'-end Processing
NcRNA Metabolic Process
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of RNA Export From Nucleus
Positive Regulation Of Viral Transcription
Pathways
mRNA Splicing
Formation of HIV-1 elongation complex containing HIV-1 Tat
RNA Polymerase II Transcription
Abortive elongation of HIV-1 transcript in the absence of Tat
HIV Infection
Formation of the Early Elongation Complex
Transport of the SLBP independent Mature mRNA
Tat-mediated elongation of the HIV-1 transcript
Cleavage of Growing Transcript in the Termination Region
Processing of Intronless Pre-mRNAs
RNA Polymerase II Pre-transcription Events
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
HIV Life Cycle
Transport of Mature Transcript to Cytoplasm
HIV Transcription Elongation
SLBP independent Processing of Histone Pre-mRNAs
Nonsense-Mediated Decay (NMD)
Transport of Mature mRNA Derived from an Intronless Transcript
Processing of Capped Intron-Containing Pre-mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Capping
Transport of Mature mRNAs Derived from Intronless Transcripts
mRNA Splicing - Minor Pathway
Metabolism of non-coding RNA
mRNA Splicing - Major Pathway
mRNA 3'-end processing
Late Phase of HIV Life Cycle
Formation of RNA Pol II elongation complex
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)
snRNP Assembly
Formation of HIV elongation complex in the absence of HIV Tat
Processing of Capped Intronless Pre-mRNA
Formation of the HIV-1 Early Elongation Complex
RNA Polymerase II Transcription Termination
Transcription of the HIV genome
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
RNA Polymerase II Transcription Elongation
Drugs
Diseases
GWAS
Protein-Protein Interactions
24 interactors:
ALYREF
BARD1
DDX39A
DNM2
EXOSC9
FANCA
HIPK2
HNRNPLL
IL7R
NCBP2
PIAS2
RBM39
RPS15A
SARNP
SREK1
STRN4
TDG
THOC3
THOC5
THOC6
THOC7
TUBB3
YWHAG
ZHX1
7 interactors:
DDX39B
EIF4G1
EIF5
HNRNPF
HNRNPH1
LZTS2
NCBP1
Entrez ID
7919
22916
HPRD ID
00805
05503
Ensembl ID
ENSG00000198563
ENSG00000114503
Uniprot IDs
Q13838
E9PAR5
P52298
PDB IDs
1T5I
1T6N
1XTI
1XTJ
1XTK
1H2T
1H2U
1H2V
1H6K
1N52
1N54
3FEX
3FEY
Enriched GO Terms of Interacting Partners
?
MRNA Export From Nucleus
RNA Export From Nucleus
Viral MRNA Export From Host Cell Nucleus
MRNA Metabolic Process
Nuclear Export
MRNA Transport
RNA Transport
RNA Localization
MRNA Processing
RNA Splicing
Intracellular Transport Of Virus
RNA Processing
Nucleocytoplasmic Transport
Nuclear Transport
RNA Metabolic Process
Nucleobase-containing Compound Metabolic Process
Gene Expression
Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Cytoplasmic Transport
Viral Life Cycle
Viral Process
Intracellular Transport
Establishment Of Localization In Cell
Cellular Metabolic Process
Cellular Localization
Regulation Of RNA Export From Nucleus
Positive Regulation Of Gene Expression
Regulation Of Gene Expression
Regulation Of Nitrogen Compound Metabolic Process
RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription, Elongation
Nuclear-transcribed MRNA Catabolic Process
Regulation Of RNA Metabolic Process
MRNA Catabolic Process
Termination Of RNA Polymerase II Transcription
RNA Catabolic Process
Regulation Of Intracellular Transport
Aromatic Compound Catabolic Process
Regulation Of Nucleocytoplasmic Transport
Transcription, DNA-templated
Cellular Response To DNA Damage Stimulus
Transport
Regulation Of DNA-templated Transcription, Elongation
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Metabolic Process
SnRNA Export From Nucleus
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Regulation Of Translational Initiation
RNA Splicing
Nuclear Export
Nucleocytoplasmic Transport
Nuclear Transport
Regulation Of Translation
Gene Expression
MRNA Export From Nucleus
RNA Export From Nucleus
Posttranscriptional Regulation Of Gene Expression
MRNA 3'-end Processing
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Regulation Of RNA Splicing
Viral Process
RNA 3'-end Processing
Regulation Of Gene Expression
MRNA Transport
Cellular Macromolecular Complex Assembly
RNA Transport
RNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
Cytoplasmic Transport
RNA Localization
RNA Secondary Structure Unwinding
MRNA Catabolic Process
Ribonucleoprotein Complex Assembly
Negative Regulation Of DNA Damage Checkpoint
RNA Catabolic Process
Translational Initiation
Viral MRNA Export From Host Cell Nucleus
Spindle Midzone Assembly
Regulation Of DNA Damage Checkpoint
Microtubule Severing
Ribonucleoprotein Complex Biogenesis
Nucleobase-containing Compound Metabolic Process
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of MRNA 3'-end Processing
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Regulation Of MRNA 3'-end Processing
Regulation Of Metabolic Process
MRNA Cleavage
Cellular Nitrogen Compound Metabolic Process
Histone MRNA Metabolic Process
Aromatic Compound Catabolic Process
Tagcloud
?
22c
348c
acc
agc
agt
amazon
asymptomatic
bat1
brazilian
categorized
cc
complicated
ga
gg
ggt
haplotypes
helicase
il6
malaria
mild
ncoi
nlaiii
plasmodium
polymorphisms
postulation
restriction
snps
uninfected
vivax
Tagcloud (Difference)
?
22c
348c
acc
agc
agt
amazon
asymptomatic
bat1
brazilian
categorized
cc
complicated
ga
gg
ggt
haplotypes
helicase
il6
malaria
mild
ncoi
nlaiii
plasmodium
polymorphisms
postulation
restriction
snps
uninfected
vivax
Tagcloud (Intersection)
?