DDX39B and SARNP

Number of citations of the paper that reports this interaction (PMID 14667819)
24

Data Source:
HPRD (in vivo, in vitro, two hybrid)

		DDX39B	SARNP
Gene Name		DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	SAP domain containing ribonucleoprotein
Image
Gene Ontology Annotations	Cellular Component	Transcription Export Complex Nucleus Nucleoplasm Spliceosomal Complex U4 SnRNP U6 SnRNP Cytoplasm Nuclear Speck	Transcription Export Complex Nucleus Nucleoplasm Nuclear Speck Intracellular Membrane-bounded Organelle
	Molecular Function	ATP-dependent RNA Helicase Activity Protein Binding ATP Binding RNA-dependent ATPase Activity U6 SnRNA Binding U4 SnRNA Binding ATP-dependent Protein Binding Poly(A) RNA Binding	DNA Binding Poly(A) RNA Binding
	Biological Process	Spliceosomal Complex Assembly MRNA Splicing, Via Spliceosome MRNA Export From Nucleus RNA Splicing RNA Secondary Structure Unwinding Positive Regulation Of DNA-templated Transcription, Elongation Viral MRNA Export From Host Cell Nucleus Negative Regulation Of DNA Damage Checkpoint	Transcription, DNA-templated Regulation Of Transcription, DNA-templated MRNA Export From Nucleus Regulation Of Translation
Pathways
Drugs
Diseases
GWAS
Protein-Protein Interactions		24 interactors: ALYREF BARD1 DDX39A DNM2 EXOSC9 FANCA HIPK2 HNRNPLL IL7R NCBP2 PIAS2 RBM39 RPS15A SARNP SREK1 STRN4 TDG THOC3 THOC5 THOC6 THOC7 TUBB3 YWHAG ZHX1	4 interactors: CSNK2B DDX39A DDX39B VHL
Entrez ID		7919	84324
HPRD ID		00805	16716
Ensembl ID		ENSG00000198563	ENSG00000205323
Uniprot IDs		Q13838	P82979
PDB IDs		1T5I 1T6N 1XTI 1XTJ 1XTK	2DO1
Enriched GO Terms of Interacting Partners?		MRNA Export From Nucleus RNA Export From Nucleus Viral MRNA Export From Host Cell Nucleus MRNA Metabolic Process Nuclear Export MRNA Transport RNA Transport RNA Localization MRNA Processing RNA Splicing Intracellular Transport Of Virus RNA Processing Nucleocytoplasmic Transport Nuclear Transport RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Gene Expression Nitrogen Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Cytoplasmic Transport Viral Life Cycle Viral Process Intracellular Transport Establishment Of Localization In Cell Cellular Metabolic Process Cellular Localization Regulation Of RNA Export From Nucleus Positive Regulation Of Gene Expression Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process RNA Biosynthetic Process Positive Regulation Of DNA-templated Transcription, Elongation Nuclear-transcribed MRNA Catabolic Process Regulation Of RNA Metabolic Process MRNA Catabolic Process Termination Of RNA Polymerase II Transcription RNA Catabolic Process Regulation Of Intracellular Transport Aromatic Compound Catabolic Process Regulation Of Nucleocytoplasmic Transport Transcription, DNA-templated Cellular Response To DNA Damage Stimulus Transport Regulation Of DNA-templated Transcription, Elongation MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Metabolic Process SnRNA Export From Nucleus	MRNA Export From Nucleus RNA Export From Nucleus Nuclear Export MRNA Transport RNA Transport RNA Localization RNA Secondary Structure Unwinding MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Negative Regulation Of DNA Damage Checkpoint Negative Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Nucleocytoplasmic Transport Nuclear Transport Viral MRNA Export From Host Cell Nucleus Positive Regulation Of Activin Receptor Signaling Pathway RNA Splicing Adiponectin-activated Signaling Pathway Endothelial Tube Morphogenesis MRNA Processing Regulation Of DNA Damage Checkpoint MRNA Metabolic Process Negative Regulation Of Blood Vessel Endothelial Cell Migration RNA Processing Regulation Of Activin Receptor Signaling Pathway Cellular Macromolecular Complex Assembly Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Intracellular Transport Of Virus Negative Regulation Of Cell Proliferation Positive Regulation Of Cellular Metabolic Process Positive Regulation Of DNA-templated Transcription, Elongation Cytoplasmic Transport Negative Regulation Of Endothelial Cell Migration Regulation Of Cell Cycle Checkpoint Positive Regulation Of Pathway-restricted SMAD Protein Phosphorylation Regulation Of Blood Vessel Endothelial Cell Migration Negative Regulation Of Epithelial Cell Migration Regulation Of Transcription From RNA Polymerase II Promoter In Response To Stress Regulation Of DNA-templated Transcription, Elongation Regulation Of Pathway-restricted SMAD Protein Phosphorylation Regulation Of DNA-templated Transcription In Response To Stress Spliceosomal Complex Assembly Positive Regulation Of Metabolic Process Cell Morphogenesis
Tagcloud ?		22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Difference) ?		22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Intersection) ?