NCBP2 and DDX39B

Number of citations of the paper that reports this interaction (PMID 17190602)
119

Data Source:
BioGRID (pull down)

		NCBP2	DDX39B
Gene Name		nuclear cap binding protein subunit 2, 20kDa	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
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Gene Ontology Annotations	Cellular Component	Nucleus Nucleoplasm Cytoplasm Cytosol MRNA Cap Binding Complex Nuclear Cap Binding Complex	Transcription Export Complex Nucleus Nucleoplasm Spliceosomal Complex U4 SnRNP U6 SnRNP Cytoplasm Nuclear Speck
	Molecular Function	Nucleotide Binding RNA Cap Binding RNA 7-methylguanosine Cap Binding RNA Binding Protein Binding Poly(A) RNA Binding	ATP-dependent RNA Helicase Activity Protein Binding ATP Binding RNA-dependent ATPase Activity U6 SnRNA Binding U4 SnRNA Binding ATP-dependent Protein Binding Poly(A) RNA Binding
	Biological Process	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Spliceosomal SnRNP Assembly MRNA Splicing, Via Spliceosome Transcription From RNA Polymerase II Promoter Transcription Elongation From RNA Polymerase II Promoter Termination Of RNA Polymerase II Transcription 7-methylguanosine MRNA Capping MRNA Export From Nucleus SnRNA Export From Nucleus Regulation Of Translational Initiation Histone MRNA Metabolic Process RNA Splicing Gene Expression Viral Process Gene Silencing By RNA MRNA 3'-end Processing NcRNA Metabolic Process MRNA Cis Splicing, Via Spliceosome Positive Regulation Of RNA Export From Nucleus Positive Regulation Of Viral Transcription	Spliceosomal Complex Assembly MRNA Splicing, Via Spliceosome MRNA Export From Nucleus RNA Splicing RNA Secondary Structure Unwinding Positive Regulation Of DNA-templated Transcription, Elongation Viral MRNA Export From Host Cell Nucleus Negative Regulation Of DNA Damage Checkpoint
Pathways		mRNA Splicing Formation of HIV-1 elongation complex containing HIV-1 Tat RNA Polymerase II Transcription Abortive elongation of HIV-1 transcript in the absence of Tat HIV Infection Formation of the Early Elongation Complex Transport of the SLBP independent Mature mRNA Tat-mediated elongation of the HIV-1 transcript Cleavage of Growing Transcript in the Termination Region Processing of Intronless Pre-mRNAs RNA Polymerase II Pre-transcription Events SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs HIV Life Cycle Transport of Mature Transcript to Cytoplasm HIV Transcription Elongation SLBP independent Processing of Histone Pre-mRNAs Nonsense-Mediated Decay (NMD) Transport of Mature mRNA Derived from an Intronless Transcript Processing of Capped Intron-Containing Pre-mRNA Transport of the SLBP Dependant Mature mRNA Transport of Mature mRNA derived from an Intron-Containing Transcript mRNA Capping Transport of Mature mRNAs Derived from Intronless Transcripts mRNA Splicing - Minor Pathway Metabolism of non-coding RNA mRNA Splicing - Major Pathway mRNA 3'-end processing Late Phase of HIV Life Cycle Formation of RNA Pol II elongation complex Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) snRNP Assembly Formation of HIV elongation complex in the absence of HIV Tat Processing of Capped Intronless Pre-mRNA Formation of the HIV-1 Early Elongation Complex RNA Polymerase II Transcription Termination Transcription of the HIV genome Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) RNA Polymerase II Transcription Elongation
Drugs
Diseases
GWAS
Protein-Protein Interactions		7 interactors: DDX39B EIF4G1 EIF5 HNRNPF HNRNPH1 LZTS2 NCBP1	24 interactors: ALYREF BARD1 DDX39A DNM2 EXOSC9 FANCA HIPK2 HNRNPLL IL7R NCBP2 PIAS2 RBM39 RPS15A SARNP SREK1 STRN4 TDG THOC3 THOC5 THOC6 THOC7 TUBB3 YWHAG ZHX1
Entrez ID		22916	7919
HPRD ID		05503	00805
Ensembl ID		ENSG00000114503	ENSG00000198563
Uniprot IDs		E9PAR5 P52298	Q13838
PDB IDs		1H2T 1H2U 1H2V 1H6K 1N52 1N54 3FEX 3FEY	1T5I 1T6N 1XTI 1XTJ 1XTK
Enriched GO Terms of Interacting Partners?		MRNA Processing MRNA Metabolic Process RNA Processing MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Regulation Of Translational Initiation RNA Splicing Nuclear Export Nucleocytoplasmic Transport Nuclear Transport Regulation Of Translation Gene Expression MRNA Export From Nucleus RNA Export From Nucleus Posttranscriptional Regulation Of Gene Expression MRNA 3'-end Processing Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Regulation Of RNA Splicing Viral Process RNA 3'-end Processing Regulation Of Gene Expression MRNA Transport Cellular Macromolecular Complex Assembly RNA Transport RNA Metabolic Process Nuclear-transcribed MRNA Catabolic Process Cytoplasmic Transport RNA Localization RNA Secondary Structure Unwinding MRNA Catabolic Process Ribonucleoprotein Complex Assembly Negative Regulation Of DNA Damage Checkpoint RNA Catabolic Process Translational Initiation Viral MRNA Export From Host Cell Nucleus Spindle Midzone Assembly Regulation Of DNA Damage Checkpoint Microtubule Severing Ribonucleoprotein Complex Biogenesis Nucleobase-containing Compound Metabolic Process MRNA Cis Splicing, Via Spliceosome Positive Regulation Of MRNA 3'-end Processing Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Regulation Of MRNA 3'-end Processing Regulation Of Metabolic Process MRNA Cleavage Cellular Nitrogen Compound Metabolic Process Histone MRNA Metabolic Process Aromatic Compound Catabolic Process	MRNA Export From Nucleus RNA Export From Nucleus Viral MRNA Export From Host Cell Nucleus MRNA Metabolic Process Nuclear Export MRNA Transport RNA Transport RNA Localization MRNA Processing RNA Splicing Intracellular Transport Of Virus RNA Processing Nucleocytoplasmic Transport Nuclear Transport RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Gene Expression Nitrogen Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Cytoplasmic Transport Viral Life Cycle Viral Process Intracellular Transport Establishment Of Localization In Cell Cellular Metabolic Process Cellular Localization Regulation Of RNA Export From Nucleus Positive Regulation Of Gene Expression Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process RNA Biosynthetic Process Positive Regulation Of DNA-templated Transcription, Elongation Nuclear-transcribed MRNA Catabolic Process Regulation Of RNA Metabolic Process MRNA Catabolic Process Termination Of RNA Polymerase II Transcription RNA Catabolic Process Regulation Of Intracellular Transport Aromatic Compound Catabolic Process Regulation Of Nucleocytoplasmic Transport Transcription, DNA-templated Cellular Response To DNA Damage Stimulus Transport Regulation Of DNA-templated Transcription, Elongation MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Metabolic Process SnRNA Export From Nucleus
Tagcloud ?			22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Difference) ?			22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Intersection) ?