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NCBP2 and DDX39B
Number of citations of the paper that reports this interaction (PubMedID
17190602
)
0
Data Source:
BioGRID
(pull down)
NCBP2
DDX39B
Description
nuclear cap binding protein subunit 2
DExD-box helicase 39B
Image
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Nuclear Cap Binding Complex
RNA Cap Binding Complex
Ciliary Basal Body
Transcription Export Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
U4 SnRNP
U6 SnRNP
Cytoplasm
Nuclear Speck
Molecular Function
RNA Cap Binding
RNA 7-methylguanosine Cap Binding
Nucleic Acid Binding
DNA Binding
RNA Binding
MRNA Binding
Protein Binding
SnRNA Binding
Nucleotide Binding
Nucleic Acid Binding
RNA Binding
RNA Helicase Activity
MRNA Binding
Helicase Activity
Protein Binding
ATP Binding
ATP-dependent Activity, Acting On RNA
Hydrolase Activity
ATP Hydrolysis Activity
U6 SnRNA Binding
U4 SnRNA Binding
Identical Protein Binding
ATP-dependent Protein Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Alternative MRNA Splicing, Via Spliceosome
MRNA Splicing, Via Spliceosome
Cap-dependent Translational Initiation
MRNA Processing
MRNA Export From Nucleus
SnRNA Export From Nucleus
Regulation Of Translation
Regulation Of Translational Initiation
Histone MRNA Metabolic Process
RNA Splicing
MRNA Metabolic Process
Regulatory NcRNA-mediated Gene Silencing
Primary MiRNA Processing
MRNA 3'-end Processing
Positive Regulation Of MRNA 3'-end Processing
Positive Regulation Of Transcription Elongation By RNA Polymerase II
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
MiRNA-mediated Post-transcriptional Gene Silencing
MRNA Transcription By RNA Polymerase II
MRNA Cis Splicing, Via Spliceosome
Positive Regulation Of RNA Export From Nucleus
MRNA Transport
Spliceosomal Complex Assembly
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Export From Nucleus
MRNA Export From Nucleus
RNA Splicing
MRNA Transport
Pathways
SLBP independent Processing of Histone Pre-mRNAs
Formation of RNA Pol II elongation complex
Formation of the Early Elongation Complex
Transport of the SLBP independent Mature mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA Derived from an Intronless Transcript
Transport of Mature mRNA derived from an Intron-Containing Transcript
Formation of HIV elongation complex in the absence of HIV Tat
Formation of the HIV-1 Early Elongation Complex
Formation of HIV-1 elongation complex containing HIV-1 Tat
Abortive elongation of HIV-1 transcript in the absence of Tat
snRNP Assembly
RNA Polymerase II Pre-transcription Events
FGFR2 alternative splicing
RNA polymerase II transcribes snRNA genes
mRNA Capping
mRNA Splicing - Major Pathway
mRNA Splicing - Minor Pathway
mRNA 3'-end processing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription Termination
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
Processing of Intronless Pre-mRNAs
Signaling by FGFR2 IIIa TM
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)
Nuclear RNA decay
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
RHOBTB2 GTPase cycle
Drugs
Artenimol
Diseases
GWAS
Malaria (
31844061
)
Night sleep phenotypes (
27126917
)
Pre-treatment viral load in HIV-1 infection (
31219150
)
Asthma (
31619474
)
Asthma (childhood onset) (
31619474
)
Asthma and major depressive disorder (
31619474
)
Autism spectrum disorder or schizophrenia (
28540026
)
High light scatter reticulocyte count (
32888494
)
Inflammatory bowel disease (
28067908
)
Malaria (
31844061
)
Mean platelet volume (
27863252
)
Mean spheric corpuscular volume (
32888494
)
Monocyte percentage of white cells (
27863252
)
Mosquito bite size (
28199695
)
Myositis (
26291516
)
Reticulocyte count (
32888494
)
Reticulocyte fraction of red cells (
32888494
)
Ulcerative colitis (
28067908
)
Interacting Genes
7 interacting genes:
DDX39B
EIF4G1
EIF5
HNRNPF
HNRNPH1
LZTS2
NCBP1
31 interacting genes:
ALYREF
BARD1
DDX39A
DNM2
EXOSC9
FANCA
HIPK2
HNRNPLL
IL7R
LUZP4
NCBP2
OGT
PIAS2
PKM
RBM39
RNF4
RPS15A
SARNP
SDCBP
SNRPA
SREBF1
SREK1
SRPK2
STRN4
TDG
THOC3
THOC6
TUBB3
UBE2I
YWHAG
ZHX1
Entrez ID
22916
7919
HPRD ID
05503
00805
Ensembl ID
ENSG00000114503
ENSG00000198563
Uniprot IDs
F6WVI0
P52298
A0A024RCM3
Q13838
PDB IDs
1H2T
1H2U
1H2V
1H6K
1N52
1N54
3FEX
3FEY
5OO6
5OOB
6D0Y
7ABG
8BY6
8PMP
8PNT
8SRR
8SUY
1T5I
1T6N
1XTI
1XTJ
1XTK
7APK
7ZNK
7ZNL
8ENK
Enriched GO Terms of Interacting Partners
?
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Cap-dependent Translational Initiation
RNA Binding
Translational Initiation
RNA Splicing
Regulation Of Translational Initiation
MRNA Processing
Nuclear Export
Spliceosomal Complex
Regulation Of RNA Splicing
Protein-RNA Complex Assembly
MRNA Metabolic Process
Cytoplasmic Translational Initiation
MRNA Binding
Nuclear Transport
Nucleocytoplasmic Transport
Spliceosomal Complex Assembly
Translation Initiation Factor Activity
RNA Processing
MRNA Export From Nucleus
Positive Regulation Of Eukaryotic Translation Initiation Factor 4F Complex Assembly
Ribonucleoprotein Complex
Positive Regulation Of RNA Binding
Primary Ureteric Bud Growth
Regulation Of Translation
RNA Export From Nucleus
Catalytic Step 2 Spliceosome
MiRNA-mediated Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Eukaryotic Initiation Factor EIF2 Binding
Nucleic Acid Binding
RNA Metabolic Process
RNA Cap Binding Complex
MRNA Transport
Nuclear Cap Binding Complex
Post-transcriptional Gene Silencing
Post-transcriptional Regulation Of Gene Expression
SnRNA Export From Nucleus
RNA Transport
Positive Regulation Of Cell Growth
Regulatory NcRNA-mediated Gene Silencing
Positive Regulation Of Translation In Response To Endoplasmic Reticulum Stress
Positive Regulation Of MRNA 3'-end Processing
Molecular Adaptor Activity
Macromolecule Metabolic Process
Positive Regulation Of Translation In Response To Stress
7-methylguanosine MRNA Capping
ATP-dependent Protein Binding
U4 SnRNA Binding
RNA Binding
Nucleoplasm
MRNA Metabolic Process
Nucleus
Nuclear Speck
Nuclear Export
MRNA Export From Nucleus
MRNA Transport
MRNA Processing
Transcription Export Complex
RNA Export From Nucleus
RNA Transport
RNA Splicing
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Transport
Macromolecule Metabolic Process
RNA Processing
Nucleobase-containing Compound Metabolic Process
Nuclear Transport
Nucleocytoplasmic Transport
RNA Metabolic Process
PML Body
Nucleic Acid Binding
Regulation Of Nucleobase-containing Compound Metabolic Process
Protein K6-linked Ubiquitination
Regulation Of Gene Expression
Regulation Of RNA Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
THO Complex Part Of Transcription Export Complex
U1 SnRNP Binding
MRNA Binding
Regulation Of MRNA Processing
Negative Regulation Of RNA Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of MRNA 3'-end Processing
Regulation Of Macromolecule Metabolic Process
Response To Insulin
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Biosynthetic Process
Negative Regulation Of RNA Biosynthetic Process
Positive Regulation Of Metabolic Process
Positive Regulation Of Biosynthetic Process
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Tagcloud (Difference)
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Tagcloud (Intersection)
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