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DDX39B and ALYREF
Number of citations of the paper that reports this interaction (PubMedID
14667819
)
0
Data Source:
HPRD
(two hybrid)
DDX39B
ALYREF
Description
DExD-box helicase 39B
Aly/REF export factor
Image
GO Annotations
Cellular Component
Transcription Export Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
U4 SnRNP
U6 SnRNP
Cytoplasm
Nuclear Speck
Transcription Export Complex
Chromosome, Telomeric Region
Nucleus
Nucleoplasm
Spliceosomal Complex
Cytoplasm
Cytosol
Membrane
Nuclear Speck
Exon-exon Junction Complex
Extracellular Exosome
Catalytic Step 2 Spliceosome
Molecular Function
Nucleotide Binding
Nucleic Acid Binding
RNA Binding
RNA Helicase Activity
MRNA Binding
Helicase Activity
Protein Binding
ATP Binding
ATP-dependent Activity, Acting On RNA
Hydrolase Activity
ATP Hydrolysis Activity
U6 SnRNA Binding
U4 SnRNA Binding
Identical Protein Binding
ATP-dependent Protein Binding
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
C5-methylcytidine-containing RNA Reader Activity
Biological Process
Spliceosomal Complex Assembly
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Export From Nucleus
MRNA Export From Nucleus
RNA Splicing
MRNA Transport
Osteoblast Differentiation
MRNA Processing
RNA Export From Nucleus
MRNA Export From Nucleus
RNA Splicing
MRNA Transport
Pathways
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
RHOBTB2 GTPase cycle
Transport of the SLBP independent Mature mRNA
Transport of the SLBP Dependant Mature mRNA
Transport of Mature mRNA Derived from an Intronless Transcript
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Drugs
Artenimol
Diseases
GWAS
Asthma (
31619474
)
Asthma (childhood onset) (
31619474
)
Asthma and major depressive disorder (
31619474
)
Autism spectrum disorder or schizophrenia (
28540026
)
High light scatter reticulocyte count (
32888494
)
Inflammatory bowel disease (
28067908
)
Malaria (
31844061
)
Mean platelet volume (
27863252
)
Mean spheric corpuscular volume (
32888494
)
Monocyte percentage of white cells (
27863252
)
Mosquito bite size (
28199695
)
Myositis (
26291516
)
Reticulocyte count (
32888494
)
Reticulocyte fraction of red cells (
32888494
)
Ulcerative colitis (
28067908
)
Interacting Genes
31 interacting genes:
ALYREF
BARD1
DDX39A
DNM2
EXOSC9
FANCA
HIPK2
HNRNPLL
IL7R
LUZP4
NCBP2
OGT
PIAS2
PKM
RBM39
RNF4
RPS15A
SARNP
SDCBP
SNRPA
SREBF1
SREK1
SRPK2
STRN4
TDG
THOC3
THOC6
TUBB3
UBE2I
YWHAG
ZHX1
13 interacting genes:
AKT1
CEBPA
DDX39B
ESR1
FOXP1
IL7R
LEF1
MAGOH
NXF1
PTEN
RUNX2
THOC6
UPF3A
Entrez ID
7919
10189
HPRD ID
00805
09168
Ensembl ID
ENSG00000198563
ENSG00000183684
Uniprot IDs
A0A024RCM3
Q13838
E9PB61
Q86V81
PDB IDs
1T5I
1T6N
1XTI
1XTJ
1XTK
7APK
7ZNK
7ZNL
8ENK
3ULH
7ZNJ
7ZNK
Enriched GO Terms of Interacting Partners
?
RNA Binding
Nucleoplasm
MRNA Metabolic Process
Nucleus
Nuclear Speck
Nuclear Export
MRNA Export From Nucleus
MRNA Transport
MRNA Processing
Transcription Export Complex
RNA Export From Nucleus
RNA Transport
RNA Splicing
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Transport
Macromolecule Metabolic Process
RNA Processing
Nucleobase-containing Compound Metabolic Process
Nuclear Transport
Nucleocytoplasmic Transport
RNA Metabolic Process
PML Body
Nucleic Acid Binding
Regulation Of Nucleobase-containing Compound Metabolic Process
Protein K6-linked Ubiquitination
Regulation Of Gene Expression
Regulation Of RNA Metabolic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Primary Metabolic Process
Regulation Of Transcription By RNA Polymerase II
THO Complex Part Of Transcription Export Complex
U1 SnRNP Binding
MRNA Binding
Regulation Of MRNA Processing
Negative Regulation Of RNA Metabolic Process
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of MRNA 3'-end Processing
Regulation Of Macromolecule Metabolic Process
Response To Insulin
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Biosynthetic Process
Negative Regulation Of RNA Biosynthetic Process
Positive Regulation Of Metabolic Process
Positive Regulation Of Biosynthetic Process
Nucleoplasm
MRNA Transport
RNA Transport
Transcription Export Complex
MRNA Export From Nucleus
RNA Export From Nucleus
Nucleobase-containing Compound Transport
Nuclear Transport
Nucleocytoplasmic Transport
Cell Development
Positive Regulation Of Cell Population Proliferation
RNA Metabolic Process
Nuclear Export
Osteoblast Differentiation
Mononuclear Cell Differentiation
T Cell Differentiation
Leukocyte Differentiation
Regulation Of Cell Population Proliferation
Cell Population Proliferation
Positive Regulation Of Gene Expression
Nitric-oxide Synthase Regulator Activity
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Regulation Of Cell Development
Positive Regulation Of Biosynthetic Process
Negative Regulation Of Metabolic Process
Animal Organ Development
Nucleic Acid Metabolic Process
Negative Regulation Of RNA Metabolic Process
Regulation Of Multicellular Organismal Development
Transcription Regulator Complex
Lymphocyte Differentiation
Regulation Of Nucleobase-containing Compound Metabolic Process
Macromolecule Metabolic Process
Regulation Of Organ Growth
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay
Regulation Of Cell Differentiation
Negative Regulation Of Macromolecule Biosynthetic Process
Cellular Response To Tumor Necrosis Factor
Myelin Maintenance
Nucleus
T Cell Activation
Beta-catenin Binding
Positive Regulation Of Ubiquitin-dependent Protein Catabolic Process
Negative Regulation Of Biosynthetic Process
Osteoblast Development
Positive Regulation Of Macromolecule Metabolic Process
Cell Differentiation
DNA-binding Transcription Factor Activity
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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