Wiki-Pi
About
Search
People
Updates
Search
TRA2B and U2AF1
Number of citations of the paper that reports this interaction (PubMedID
32296183
)
50
Data Source:
BioGRID
(two hybrid)
TRA2B
U2AF1
Description
transformer 2 beta homolog
U2 small nuclear RNA auxiliary factor 1
Image
GO Annotations
Cellular Component
Nucleus
Nuclear Inner Membrane
Nucleoplasm
Spliceosomal Complex
Protein-containing Complex
Nucleus
Nucleoplasm
Spliceosomal Complex
Cajal Body
Nuclear Speck
Catalytic Step 2 Spliceosome
U2AF Complex
Molecular Function
Nucleic Acid Binding
RNA Binding
MRNA Binding
Protein Binding
Protein Domain Specific Binding
Pre-mRNA Binding
Identical Protein Binding
Nucleic Acid Binding
RNA Binding
Protein Binding
Zinc Ion Binding
Pre-mRNA 3'-splice Site Binding
Metal Ion Binding
RS Domain Binding
Biological Process
RNA Splicing, Via Transesterification Reactions
Regulation Of Alternative MRNA Splicing, Via Spliceosome
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Cerebral Cortex Regionalization
Regulation Of RNA Splicing
Positive Regulation Of MRNA Splicing, Via Spliceosome
Cellular Response To Glucose Stimulus
Embryonic Brain Development
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
Pathways
mRNA Splicing - Major Pathway
Processing of Capped Intron-Containing Pre-mRNA
RHOBTB2 GTPase cycle
RHOBTB1 GTPase cycle
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Drugs
Diseases
GWAS
Appendicular lean mass (
33097823
)
Height (
31562340
)
Menarche (age at onset) (
21102462
25231870
27182965
)
Post bronchodilator FEV1 (
26634245
)
Post bronchodilator FEV1/FVC ratio (
26634245
)
Blood and toenail selenium levels (
25343990
)
Interacting Genes
107 interacting genes:
-
CDK6
CLK1
CLK3
EPM2AIP1
HINFP
HIPK3
HNRNPA1
IVNS1ABP
LUM
MAGOHB
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
MYPOP
NGFR
NXF1
PCDHB14
RBMX
RBMXL2
RBMY1A1
RBMY1F
RBMY1J
RNPS1
SREK1
SRPK1
SRSF10
SRSF2
SRSF3
SRSF4
SRSF8
SRSF9
TNPO3
U2AF1
YTHDC1
YWHAG
YWHAZ
ZRANB2
58 interacting genes:
ALG13
AP1B1
AP2B1
CARNMT1
CHERP
CIRSR
CLK2
CPEB2
DHX38
EFHC2
EPB41
FILNC1
FRA10AC1
HINFP
HMGB2
HNRNPK
HNRNPM
IL7R
JMJD6
KRT1
KRT75
MAP1B
MEOX2
MFAP1
MLH1
NDN
NKAP
NXF1
PABPC1
PRPF19
PRPF38A
PRPF4
PRPF40A
PTEN
RBM10
RNPS1
RP9
SF3A3
SF3B2
SNRNP35
SNRPD1
SRPK1
SRPK2
SRRM4
SRSF1
SRSF2
SRSF3
SUV39H1
TOE1
TRA2B
U2AF2
VEGFA
VPS26C
WEE2-AS1
ZCCHC10
ZNF417
ZRANB2
ZRSR2
Entrez ID
6434
7307
HPRD ID
04097
01871
Ensembl ID
ENSG00000136527
ENSG00000160201
Uniprot IDs
P62995
Q01081
Q7Z780
PDB IDs
2CQC
2KXN
2RRA
2RRB
1JMT
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Extracellular Vesicle
Regulation Of Macromolecule Metabolic Process
Regulation Of MRNA Metabolic Process
Negative Regulation Of Translation
Regulation Of Metabolic Process
Positive Regulation Of MRNA Metabolic Process
MRNA Destabilization
RNA Destabilization
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Negative Regulation Of Vascular Endothelial Growth Factor Production
Negative Regulation Of Angiogenesis
Negative Regulation Of Vasculature Development
Negative Regulation Of Locomotion
Negative Regulation Of Cytokine Production
Regulation Of Angiogenesis
Regulation Of Vasculature Development
Regulation Of Translation
Regulation Of MRNA Stability
Regulation Of RNA Stability
Negative Regulation Of Protein Metabolic Process
Negative Regulation Of Multicellular Organismal Process
Regulation Of Blood Vessel Endothelial Cell Migration
Negative Regulation Of Developmental Process
Regulation Of Endothelial Cell Migration
Negative Regulation Of Blood Vessel Endothelial Cell Migration
Extracellular Space
Regulation Of Cellular Response To Growth Factor Stimulus
Negative Regulation Of Signal Transduction
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Endothelial Cell Migration
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
RNA Splicing
MRNA Processing
MRNA Metabolic Process
RNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Metabolic Process
Spliceosomal Complex
Regulation Of MRNA Splicing, Via Spliceosome
RNA Binding
Nucleic Acid Metabolic Process
Regulation Of MRNA Processing
Regulation Of RNA Splicing
Nuclear Speck
Nucleic Acid Binding
Nucleobase-containing Compound Metabolic Process
Spliceosomal Complex Assembly
Regulation Of MRNA Metabolic Process
Catalytic Step 2 Spliceosome
Nucleus
Nucleoplasm
Protein-RNA Complex Assembly
Macromolecule Metabolic Process
MRNA Binding
U2-type Precatalytic Spliceosome
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Metabolic Process
U12-type Spliceosomal Complex
Negative Regulation Of RNA Splicing
U2-type Spliceosomal Complex
Positive Regulation Of RNA Splicing
Precatalytic Spliceosome
U1 SnRNP
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Ribonucleoprotein Complex
Negative Regulation Of RNA Metabolic Process
Protein-containing Complex Assembly
U2-type Prespliceosome Assembly
Regulation Of Nucleobase-containing Compound Metabolic Process
U2 SnRNP
Commitment Complex
Positive Regulation Of Viral Genome Replication
Pre-mRNA 3'-splice Site Binding
U2AF Complex
MRNA Splice Site Recognition
Regulation Of RNA Metabolic Process
Protein-containing Complex Organization
MRNA 5'-splice Site Recognition
T Cell Differentiation In Thymus
Tagcloud
?
Tagcloud (Difference)
?
Tagcloud (Intersection)
?