FUS and SS18

Number of citations: 68 (PubMedID 30962207)
Data Source: BioGRID (pull down)

		FUS	SS18
Name		FUS RNA binding protein	SS18 subunit of BAF chromatin remodeling complex
Structure
GO Annotations	Cellular Component	Nucleus Nucleoplasm Cytoplasm Glutamatergic Synapse GABA-ergic Synapse Presynaptic Cytosol Postsynaptic Cytosol	Chromatin Nucleus Nucleoplasm Microtubule Cytoskeleton SWI/SNF Complex NpBAF Complex GBAF Complex
	Molecular Function	Nucleic Acid Binding DNA Binding Chromatin Binding Transcription Coregulator Activity Transcription Coactivator Activity RNA Binding MRNA 3'-UTR Binding Protein Binding Zinc Ion Binding Identical Protein Binding Metal Ion Binding Molecular Condensate Scaffold Activity	Transcription Coactivator Activity Protein Binding
	Biological Process	Regulation Of DNA-templated Transcription Regulation Of Transcription By RNA Polymerase II RNA Splicing Gene Expression Regulation Of RNA Splicing Positive Regulation Of DNA-templated Transcription MRNA Stabilization Protein Homooligomerization Membraneless Organelle Assembly Positive Regulation Of Double-strand Break Repair Via Homologous Recombination Amyloid Fibril Formation	Microtubule Cytoskeleton Organization Cell Morphogenesis Chromatin Remodeling Regulation Of Transcription By RNA Polymerase II Cytoskeleton Organization Positive Regulation Of Cell Population Proliferation Response To Xenobiotic Stimulus Intracellular Signal Transduction Negative Regulation Of Cell Differentiation Positive Regulation Of Transcription By RNA Polymerase II Ephrin Receptor Signaling Pathway Neuronal Stem Cell Population Maintenance Positive Regulation Of Stem Cell Population Maintenance
Pathways		mRNA Splicing - Major Pathway Processing of Capped Intron-Containing Pre-mRNA	Regulation of MITF-M-dependent genes involved in pigmentation Regulation of MITF-M-dependent genes involved in pigmentation Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) Formation of the canonical BAF (cBAF) complex Formation of the embryonic stem cell BAF (esBAF) complex Formation of the non-canonical BAF (ncBAF) complex Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF) Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Diseases		Myxoid liposarcoma Amyotrophic lateral sclerosis (ALS); Lou Gehrig's disease	Synovial sarcoma
GWAS		Bipolar disorder ( 31043756 ) Bipolar I disorder ( 31043756 ) HDL cholesterol levels ( 32203549 )	Autoimmune thyroid disease ( 32581359 ) Daytime nap ( 33568662 ) Gemcitabine-induced early high-grade neutropenia in pancreatic cancer ( 30889042 ) Mean corpuscular hemoglobin ( 32888494 ) Nickel levels ( 26025379 ) Obesity-related traits ( 23251661 ) Periodontitis (Mean PAL) ( 24024966 ) QT interval (sulfonylurea treatment interaction) ( 27958378 ) Rhegmatogenous retinal detachment ( 23585552 ) Systemic juvenile idiopathic arthritis ( 27927641 ) Toenail selenium levels ( 25343990 )
Interacting Genes		122 interacting genes: ADAMTS9-AS2 AKT1 ARID1A ATM ATXN1L BACH2 BCL2L13 CEBPA CREBBP CTNNB1 ESRRA FNDC3B GRIN1 GRIN2D IL7R ILF3 ISG15 KHDRBS3 MAX MDH1 MIR1-1 MIR1-2 MIR106A MIR106B MIR107 MIR10B MIR122 MIR128-1 MIR128-2 MIR138-1 MIR138-2 MIR140 MIR141 MIR143 MIR145 MIR155 MIR15A MIR15B MIR16-1 MIR16-2 MIR17 MIR18A MIR18B MIR199A1 MIR199A2 MIR19A MIR19B1 MIR19B2 MIR200A MIR200B MIR200C MIR205 MIR206 MIR20A MIR20B MIR21 MIR214 MIR221 MIR222 MIR25 MIR29A MIR29B1 MIR29B2 MIR29C MIR31 MIR34A MIR34B MIR34C MIR363 MIR429 MIR451A MIR7-1 MIR7-2 MIR7-3 MIR9-1 MIR9-2 MIR9-3 MIR92A1 MIR92A2 MIR93 MIR98 MIRLET7A1 MIRLET7A2 MIRLET7A3 MIRLET7B MIRLET7C MIRLET7D MIRLET7E MIRLET7F1 MIRLET7F2 MIRLET7G MIRLET7I NKD2 OGT PDE4B POLR2A PRMT1 PSMB7 PTBP1 RELA RXRA SAFB2 SF1 SFPQ SMARCB1 SMARCC1 SMARCC2 SMARCD1 SPI1 SRRM1 SRSF10 SRSF2 SRSF4 SRSF9 SS18 SUV39H1 TDRD3 THRA UBQLN2 WBP4 YBX1 ZMYM2	9 interacting genes: EP300 FUS GRB2 H3-3A MLLT10 NFKBID RBM14 SMARCA2 SMARCA4
Entrez ID		2521	6760
HPRD ID		00660	02559
Ensembl ID		ENSG00000089280	ENSG00000141380
Uniprot IDs		A0AAQ5BIG2 P35637 Q13344 Q6IBQ5	B4DLD3 B4DR34 Q15532 Q4VAX0
PDB IDs		2LA6 2LCW 4FDD 4FQ3 5W3N 5XRR 5XSG 5YVG 5YVH 5YVI 6BWZ 6BXV 6BZP 6G99 6GBM 6KJ1 6KJ2 6KJ3 6KJ4 6SNJ 6XFM 7CYL 7VQQ	7VRB
GO Terms Enriched among Interactors		MiRNA-mediated Post-transcriptional Gene Silencing RISC Complex Regulatory NcRNA-mediated Post-transcriptional Gene Silencing Post-transcriptional Gene Silencing MRNA Base-pairing Post-transcriptional Repressor Activity Regulatory NcRNA-mediated Gene Silencing Post-transcriptional Regulation Of Gene Expression Negative Regulation Of Gene Expression Negative Regulation Of Macromolecule Biosynthetic Process Negative Regulation Of Biosynthetic Process Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of Metabolic Process MRNA 3'-UTR Binding Regulation Of Gene Expression MiRNA-mediated Gene Silencing By Inhibition Of Translation Regulation Of Macromolecule Biosynthetic Process Regulation Of Macromolecule Metabolic Process MiRNA-mediated Gene Silencing By MRNA Destabilization Regulation Of Metabolic Process Negative Regulation Of Translation Extracellular Vesicle MRNA Destabilization RNA Destabilization Negative Regulation Of Angiogenesis Negative Regulation Of Vasculature Development Regulation Of MRNA Metabolic Process Positive Regulation Of MRNA Catabolic Process Negative Regulation Of Cell Migration Negative Regulation Of Developmental Process Negative Regulation Of Protein Metabolic Process Negative Regulation Of Cell Motility Regulation Of Translation Negative Regulation Of Vascular Endothelial Growth Factor Production Regulation Of Angiogenesis Negative Regulation Of Locomotion Regulation Of Vasculature Development Negative Regulation Of Cytokine Production Positive Regulation Of MRNA Metabolic Process Regulation Of MRNA Stability Regulation Of RNA Stability Negative Regulation Of Multicellular Organismal Process Regulation Of Blood Vessel Endothelial Cell Migration Negative Regulation Of Signal Transduction Regulation Of Cellular Response To Growth Factor Stimulus Regulation Of Multicellular Organismal Development Negative Regulation Of Signaling Negative Regulation Of Cell Communication Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway Regulation Of Endothelial Cell Migration Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway	Epigenetic Regulation Of Gene Expression Transcription Coactivator Activity Positive Regulation Of T Cell Activation Positive Regulation Of Leukocyte Cell-cell Adhesion Positive Regulation Of T Cell Differentiation Positive Regulation Of Lymphocyte Activation Positive Regulation Of Cell-cell Adhesion Regulation Of T Cell Activation Positive Regulation Of Cell Activation Regulation Of Leukocyte Cell-cell Adhesion Positive Regulation Of Lymphocyte Differentiation Positive Regulation Of Gene Expression, Epigenetic Positive Regulation Of Leukocyte Differentiation Positive Regulation Of Cell Adhesion Transcription Initiation-coupled Chromatin Remodeling Regulation Of T Cell Differentiation Chromatin Binding Regulation Of Cell-cell Adhesion Nucleosome Array Spacer Activity Regulation Of Lymphocyte Activation Positive Regulation Of Immune System Process Regulation Of Lymphocyte Differentiation Regulation Of Organelle Organization Regulation Of Cell Activation Chromatin Remodeling BBAF Complex Positive Regulation Of Double-strand Break Repair Positive Regulation Of T-helper 17 Cell Differentiation NpBAF Complex GBAF Complex Regulation Of Cell Adhesion Chromatin Organization NBAF Complex Host-mediated Activation Of Viral Transcription Regulation Of Immune System Process Activation Of Immune Response Positive Regulation Of T-helper 17 Type Immune Response Regulation Of Hemopoiesis Positive Regulation Of DNA Repair Heterochromatin Formation Positive Regulation Of Cell Development Regulation Of Double-strand Break Repair Nucleoplasm Positive Regulation Of RNA Biosynthetic Process Positive Regulation Of DNA-templated Transcription Regulation Of Metabolic Process Negative Regulation Of Gene Expression, Epigenetic Histone Binding Nuclear Androgen Receptor Binding Positive Regulation Of T-helper Cell Differentiation