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XRN2 and PGM1
XRN2
PGM1
Description
5'-3' exoribonuclease 2
phosphoglucomutase 1
Image
No pdb structure
GO Annotations
Cellular Component
Nucleus
Nucleoplasm
Nucleolus
Membrane
Aggresome
Extracellular Region
Cytoplasm
Cytosol
Extracellular Exosome
Tertiary Granule Lumen
Ficolin-1-rich Granule Lumen
Molecular Function
3'-5'-RNA Exonuclease Activity
Transcription Termination Site Sequence-specific DNA Binding
Nucleic Acid Binding
DNA Binding
RNA Binding
Nuclease Activity
Exonuclease Activity
5'-3' RNA Exonuclease Activity
Protein Binding
Zinc Ion Binding
5'-3' Exonuclease Activity
Hydrolase Activity
Identical Protein Binding
Metal Ion Binding
Magnesium Ion Binding
Phosphoglucomutase Activity
Protein Binding
Isomerase Activity
Intramolecular Phosphotransferase Activity
Metal Ion Binding
Biological Process
Nuclear-transcribed MRNA Catabolic Process
Nucleobase-containing Compound Metabolic Process
DNA-templated Transcription Termination
RRNA Processing
Termination Of RNA Polymerase II Transcription
RNA Processing
MRNA Processing
RNA Catabolic Process
Spermatogenesis
RNA Metabolic Process
Hippocampus Development
Neuron Differentiation
Retina Development In Camera-type Eye
Carbohydrate Metabolic Process
Glucose Metabolic Process
Gluconeogenesis
Glycolytic Process
Galactose Catabolic Process Via UDP-galactose, Leloir Pathway
Pathways
Association of TriC/CCT with target proteins during biosynthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Nuclear RNA decay
Glycogen synthesis
Defective PGM1 causes PGM1-CDG
Neutrophil degranulation
Glycogen breakdown (glycogenolysis)
Galactose catabolism
Drugs
Alpha-D-Glucose 1,6-Bisphosphate
Alpha-D-Glucose-1-Phosphate-6-Vanadate
Diseases
GWAS
Autism spectrum disorder (
30804558
)
Hip circumference adjusted for BMI (
34021172
)
Lupus nephritis in systemic lupus erythematosus (
24925725
)
Mean corpuscular hemoglobin (
27863252
32888494
)
Mean corpuscular volume (
32888494
)
Red cell distribution width (
32888494
)
Alcohol consumption (transferrin glycosylation) (
21665994
)
Type 1 diabetes (
19430480
32005708
33830302
34012112
34127860
)
Type 2 diabetes (
32499647
)
Interacting Genes
39 interacting genes:
ALDH1B1
APP
ATRN
CEBPA
COMT
CRY2
CSNK2A1
CTSC
DSCAM
DSCR9
DXO
DYNLT1
EEF1A1
EIF3L
EIF5A
EIF6
ERG
EXOSC10
EXOSC8
LCN2
LSM3
MOCS3
MRPL4
MRPS10
OGT
PLEKHF2
PRAME
PSMA3
RNF10
RNF8
TARDBP
TIPARP
TOLLIP
TTC23
TTC3
UPF2
USP16
USP7
YTHDF1
19 interacting genes:
APP
DNAJB6
DYRK3
ENO3
HSPB2
KIF1B
LINC01554
NLRP3
OGT
PAXIP1
PEA15
POT1
S100A1
S100B
TERF1
TERF2IP
TINF2
TMEM132D
USP4
Entrez ID
22803
5236
HPRD ID
10309
01389
Ensembl ID
ENSG00000088930
ENSG00000079739
Uniprot IDs
B4DZC3
Q9H0D6
B4DDQ8
B7Z6C2
P36871
PDB IDs
5EPC
5F9C
5HSH
5JN5
5TR2
5VBI
5VEC
5VG7
5VIN
6SNO
6SNP
6SNQ
6UIQ
6UO6
7S0W
7S77
Enriched GO Terms of Interacting Partners
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Macromolecule Metabolic Process
Protein Metabolic Process
Macromolecule Catabolic Process
Nuclear MRNA Surveillance
Catabolic Process
Positive Regulation Of Protein Metabolic Process
Nuclear-transcribed MRNA Catabolic Process
Regulation Of Protein Metabolic Process
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Macromolecule Biosynthetic Process
Memory
Symbiont-mediated Disruption Of Host Cell PML Body
MRNA Catabolic Process
Negative Regulation Of Gene Expression
Negative Regulation Of Biosynthetic Process
Nucleobase-containing Compound Catabolic Process
Translation
Positive Regulation Of Translational Elongation
Regulation Of Protein Catabolic Process
Positive Regulation Of Translation
Positive Regulation Of Metabolic Process
Positive Regulation Of Catabolic Process
Response To Blue Light
Regulation Of Translation
Nuclear RNA Surveillance
Exonucleolytic Trimming To Generate Mature 3'-end Of 5.8S RRNA From Tricistronic RRNA Transcript (SSU-rRNA, 5.8S RRNA, LSU-rRNA)
TRNA Surveillance
TRAMP-dependent TRNA Surveillance Pathway
Nuclear Polyadenylation-dependent RRNA Catabolic Process
RNA Surveillance
Kinase Binding
RNA Catabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Monoubiquitinated Protein Deubiquitination
Negative Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process
RRNA 3'-end Processing
Nucleolar Exosome (RNase Complex)
Cytosol
Regulation Of Translational Elongation
TRNA Decay
Regulation Of Glycolytic Process
Regulation Of Macromolecule Metabolic Process
Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process
Negative Regulation Of Metabolic Process
Regulation Of Proteolysis
Double-strand Break Repair Via Nonhomologous End Joining
Nucleic Acid Metabolic Process
Nucleoplasm
Rhythmic Process
Shelterin Complex
Nuclear Telomere Cap Complex
Telomere Capping
Telomeric DNA Binding
Negative Regulation Of Telomere Maintenance
G-rich Strand Telomeric DNA Binding
Positive Regulation Of Telomere Maintenance
Negative Regulation Of Telomere Maintenance Via Telomerase
Telomere Maintenance Via Telomerase
Negative Regulation Of Chromosome Organization
RNA-templated DNA Biosynthetic Process
Chorion Development
Telomere Maintenance Via Telomere Lengthening
Telomere Maintenance
Negative Regulation Of DNA Biosynthetic Process
Negative Regulation Of Telomere Maintenance Via Telomere Lengthening
Positive Regulation Of Chromosome Organization
Regulation Of Telomere Maintenance
Telomere Assembly
Telomere Organization
Regulation Of Telomere Maintenance Via Telomerase
Negative Regulation Of DNA Metabolic Process
Positive Regulation Of DNA Metabolic Process
Regulation Of Telomere Maintenance Via Telomere Lengthening
Telomeric D-loop Disassembly
Chromosome, Telomeric Region
Negative Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Non-canonical NF-kappaB Signal Transduction
Telomeric Loop Disassembly
Protein Localization To Chromosome, Telomeric Region
RAGE Receptor Binding
Negative Regulation Of Macromolecule Biosynthetic Process
S100 Protein Binding
Negative Regulation Of Metabolic Process
Negative Regulation Of Biosynthetic Process
Nucleoplasm
Negative Regulation Of Cellular Component Organization
Regulation Of DNA Biosynthetic Process
DNA Biosynthetic Process
DNA Metabolic Process
Regulation Of Chromosome Organization
Regulation Of TORC1 Signaling
Regulation Of Non-canonical NF-kappaB Signal Transduction
Regulation Of DNA Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Nucleus
Unfolded Protein Binding
Regulation Of Cellular Response To Stress
Identical Protein Binding
Chromosome Organization
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