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CSTF1 and POLR2A
Number of citations of the paper that reports this interaction (PMID
11459828
)
74
Data Source:
HPRD
(in vitro)
CSTF1
POLR2A
Gene Name
cleavage stimulation factor, 3 pre-RNA, subunit 1, 50kDa
polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleus
Nucleoplasm
Cytoplasm
Intracellular Membrane-bounded Organelle
Prp19 Complex
Nucleus
Nucleoplasm
DNA-directed RNA Polymerase II, Core Complex
Nucleolus
Molecular Function
RNA Binding
Protein Binding
Poly(A) RNA Binding
RNA Polymerase II Activity
DNA Binding
DNA-directed RNA Polymerase Activity
RNA-directed RNA Polymerase Activity
Protein Binding
Ubiquitin Protein Ligase Binding
Poly(A) RNA Binding
Metal Ion Binding
Biological Process
MRNA Splicing, Via Spliceosome
Transcription From RNA Polymerase II Promoter
Termination Of RNA Polymerase II Transcription
MRNA Polyadenylation
MRNA Cleavage
RNA Processing
RNA Splicing
Gene Expression
MRNA 3'-end Processing
MRNA Splicing, Via Spliceosome
Transcription, RNA-templated
DNA Repair
Transcription-coupled Nucleotide-excision Repair
Nucleotide-excision Repair
Regulation Of Transcription, DNA-templated
Transcription From RNA Polymerase II Promoter
Transcription Initiation From RNA Polymerase II Promoter
Transcription Elongation From RNA Polymerase II Promoter
7-methylguanosine MRNA Capping
RNA Splicing
Gene Expression
Viral Process
Positive Regulation Of RNA Splicing
PiRNA Metabolic Process
Somatic Stem Cell Maintenance
Positive Regulation Of Viral Transcription
Pathways
mRNA Splicing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription
Processing of Capped Intronless Pre-mRNA
mRNA Splicing - Major Pathway
Cleavage of Growing Transcript in the Termination Region
RNA Polymerase II Transcription Termination
mRNA 3'-end processing
Processing of Intronless Pre-mRNAs
RNA Polymerase II Promoter Escape
mRNA Splicing
Formation of HIV-1 elongation complex containing HIV-1 Tat
PIWI-interacting RNA (piRNA) biogenesis
Nucleotide Excision Repair
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription
Abortive elongation of HIV-1 transcript in the absence of Tat
HIV Infection
Regulatory RNA pathways
Formation of the Early Elongation Complex
Tat-mediated elongation of the HIV-1 transcript
Tat-mediated HIV elongation arrest and recovery
Formation of transcription-coupled NER (TC-NER) repair complex
RNA Pol II CTD phosphorylation and interaction with CE
RNA Polymerase II Pre-transcription Events
Dual incision reaction in TC-NER
Influenza Life Cycle
HIV elongation arrest and recovery
HIV Life Cycle
HIV Transcription Initiation
Influenza Viral RNA Transcription and Replication
RNA Pol II CTD phosphorylation and interaction with CE
Transcriptional regulation of pluripotent stem cells
RNA Polymerase II HIV Promoter Escape
HIV Transcription Elongation
POU5F1 (OCT4), SOX2, NANOG activate genes related to proliferation
Transcriptional regulation by small RNAs
Processing of Capped Intron-Containing Pre-mRNA
mRNA Capping
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
MicroRNA (miRNA) biogenesis
Influenza Infection
Pausing and recovery of Tat-mediated HIV elongation
Late Phase of HIV Life Cycle
Formation of RNA Pol II elongation complex
RNA Polymerase II Transcription Initiation And Promoter Clearance
Pausing and recovery of HIV elongation
Formation of HIV elongation complex in the absence of HIV Tat
Transcription-coupled NER (TC-NER)
Viral Messenger RNA Synthesis
Formation of the HIV-1 Early Elongation Complex
RNA Polymerase II Transcription Initiation
Transcription of the HIV genome
RNA Polymerase II Transcription Elongation
Drugs
Diseases
GWAS
Protein-Protein Interactions
5 interactors:
BARD1
BRCA1
CSTF3
POLR2A
TOLLIP
100 interactors:
ABL1
ACTB
ACTL6A
ATM
BARD1
BRCA1
CASP10
CCNH
CCNK
CCNL2
CCNT1
CDC14A
CDK12
CDK7
CDK8
CDK9
CPSF1
CPSF2
CPSF3
CREBBP
CSH2
CSNK2A1
CSTF1
CSTF2
CTCF
CTD
CTDP1
CTDSP1
CTDSP2
DHX9
ELL
ERCC5
ERCC6
ERG
FCP1
FUS
GRB2
GTF2B
GTF2E1
GTF2H4
HIST1H1C
HNRNPF
HNRNPU
HTATSF1
ITCH
IWS1
KAT2B
KLK2
KMT2D
LEO1
MCM3
MED21
MNAT1
MYC
NEDD4
NELFA
NONO
NR0B2
PCIF1
PHF8
PIN1
POLR2B
POLR2C
POLR2D
POLR2E
POLR2F
POLR2G
POLR2H
POLR2I
POLR2K
POLR2L
PPIG
PPP1CA
PQBP1
PRPF19
RECQL5
SAFB
SETD2
SMN1
SMN2
SMURF1
SND1
SUB1
SUPT5H
TAF10
TBP
TCEA1
TCEB3
TCERG1
TRAK1
TRAM2
U2AF2
UBC
UBE2L3
UPF1
WAC
WWP2
XAB2
XRCC5
ZNF74
Entrez ID
1477
5430
HPRD ID
02653
08916
Ensembl ID
ENSG00000101138
ENSG00000181222
Uniprot IDs
Q05048
P24928
PDB IDs
2GHQ
2GHT
2LTO
3D9K
3D9L
3D9M
3D9N
3D9O
3D9P
Enriched GO Terms of Interacting Partners
?
Protein K6-linked Ubiquitination
DNA Repair
Positive Regulation Of Histone H4-K20 Methylation
Positive Regulation Of Histone H4-K16 Acetylation
Transcription, RNA-templated
Negative Regulation Of MRNA 3'-end Processing
Positive Regulation Of Histone H3-K9 Acetylation
Cellular Response To DNA Damage Stimulus
Protein Polyubiquitination
Positive Regulation Of Histone H4 Acetylation
Negative Regulation Of Histone H3-K4 Methylation
DNA Metabolic Process
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Cellular Response To Indole-3-methanol
Negative Regulation Of Centriole Replication
Positive Regulation Of Protein Metabolic Process
Negative Regulation Of Protein Export From Nucleus
Dosage Compensation By Inactivation Of X Chromosome
Negative Regulation Of Histone H3-K9 Methylation
Positive Regulation Of Histone H3-K9 Methylation
Dosage Compensation
Regulation Of Histone H3-K9 Acetylation
Protein Localization To Endosome
Positive Regulation Of Metabolic Process
Response To Stress
RNA Splicing
Cellular Response To Stress
Regulation Of Centriole Replication
Positive Regulation Of Histone H3-K4 Methylation
Regulation Of Histone H4 Acetylation
Negative Regulation Of Fatty Acid Biosynthetic Process
DNA Damage Response, Signal Transduction By P53 Class Mediator Resulting In Transcription Of P21 Class Mediator
DNA Damage Response, Signal Transduction Resulting In Transcription
Positive Regulation Of Protein Sumoylation
MRNA Processing
Negative Regulation Of Histone Methylation
Negative Regulation Of Centrosome Duplication
Negative Regulation Of Cell Cycle
Regulation Of DNA Methylation
Negative Regulation Of Histone Acetylation
Regulation Of MRNA 3'-end Processing
Positive Regulation Of Histone Acetylation
MRNA Cleavage
Negative Regulation Of Peptidyl-lysine Acetylation
Regulation Of Histone H3-K4 Methylation
Regulation Of Protein Sumoylation
Negative Regulation Of Protein Acetylation
Positive Regulation Of Peptidyl-lysine Acetylation
Postreplication Repair
Transcription Elongation From RNA Polymerase II Promoter
DNA-templated Transcription, Elongation
RNA Metabolic Process
Positive Regulation Of Viral Transcription
Gene Expression
Nucleobase-containing Compound Metabolic Process
Transcription, DNA-templated
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
RNA Biosynthetic Process
Transcription From RNA Polymerase II Promoter
Cellular Nitrogen Compound Metabolic Process
Regulation Of Viral Transcription
Positive Regulation Of Viral Process
Nitrogen Compound Metabolic Process
Macromolecule Biosynthetic Process
Viral Process
MRNA Processing
Cellular Macromolecule Biosynthetic Process
RNA Processing
MRNA Metabolic Process
Transcription Initiation From RNA Polymerase II Promoter
Regulation Of Gene Expression
Transcription-coupled Nucleotide-excision Repair
Regulation Of RNA Metabolic Process
DNA-templated Transcription, Initiation
RNA Splicing
Biosynthetic Process
Regulation Of Viral Process
Regulation Of Nitrogen Compound Metabolic Process
MRNA Splicing, Via Spliceosome
Cellular Metabolic Process
RNA Splicing, Via Transesterification Reactions
7-methylguanosine MRNA Capping
Regulation Of RNA Biosynthetic Process
7-methylguanosine RNA Capping
Cellular Response To DNA Damage Stimulus
DNA Repair
Nucleotide-excision Repair
Regulation Of Metabolic Process
Positive Regulation Of Gene Expression
DNA-templated Transcription, Termination
DNA Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Cellular Response To Stress
Transcription From RNA Polymerase I Promoter
Positive Regulation Of Cellular Biosynthetic Process
Metabolic Process
Transcription Elongation From RNA Polymerase I Promoter
Transcription Initiation From RNA Polymerase I Promoter
Tagcloud
?
actb
appropriately
benchmark
chosen
confounding
gapdh
hormonal
hprt1
hyperglycemia
hyperglycemic
lean
myocardium
normalization
normalized
obesity
ppia
predisposition
reference
reproducibility
rpl13a
scrutiny
sdha
select
stably
tbp
tfrc
underline
ywhag
zucker
Tagcloud (Difference)
?
actb
appropriately
benchmark
chosen
confounding
gapdh
hormonal
hprt1
hyperglycemia
hyperglycemic
lean
myocardium
normalization
normalized
obesity
ppia
predisposition
reference
reproducibility
rpl13a
scrutiny
sdha
select
stably
tbp
tfrc
underline
ywhag
zucker
Tagcloud (Intersection)
?