SUB1 and POLR2B

Number of citations of the paper that reports this interaction (PubMedID 10024883)
0

Data Source:
BioGRID (pull down)

		SUB1	POLR2B
Description		SUB1 regulator of transcription	RNA polymerase II subunit B
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GO Annotations	Cellular Component	Nucleus Nucleoplasm Transcription Regulator Complex Nucleolus Extracellular Exosome	DNA-directed RNA Polymerase Complex Chromosome, Telomeric Region Nucleus Nucleoplasm RNA Polymerase II, Core Complex Membrane
	Molecular Function	RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding DNA Binding Single-stranded DNA Binding Transcription Coactivator Activity RNA Binding Protein Binding Identical Protein Binding	DNA Binding Chromatin Binding RNA Binding DNA-directed RNA Polymerase Activity RNA-directed RNA Polymerase Activity Protein Binding Zinc Ion Binding Transferase Activity Nucleotidyltransferase Activity Hydrolase Activity Ribonucleoside Binding 5'-3' RNA Polymerase Activity Metal Ion Binding
	Biological Process	RNA Polymerase II Promoter Clearance Regulation Of DNA-templated Transcription Regulation Of Transcription By RNA Polymerase II Negative Regulation Of DNA Metabolic Process Positive Regulation Of Transcription Initiation By RNA Polymerase II	RNA-templated Transcription DNA-templated Transcription Transcription By RNA Polymerase II
Pathways			Formation of RNA Pol II elongation complex Formation of the Early Elongation Complex Formation of HIV elongation complex in the absence of HIV Tat Formation of the HIV-1 Early Elongation Complex RNA Pol II CTD phosphorylation and interaction with CE during HIV infection HIV Transcription Initiation RNA Polymerase II HIV Promoter Escape Transcription of the HIV genome Formation of HIV-1 elongation complex containing HIV-1 Tat Formation of HIV-1 elongation complex containing HIV-1 Tat Pausing and recovery of Tat-mediated HIV elongation Abortive elongation of HIV-1 transcript in the absence of Tat Tat-mediated HIV elongation arrest and recovery Tat-mediated elongation of the HIV-1 transcript HIV elongation arrest and recovery Pausing and recovery of HIV elongation Viral Messenger RNA Synthesis MicroRNA (miRNA) biogenesis Transcriptional regulation by small RNAs PIWI-interacting RNA (piRNA) biogenesis Activation of anterior HOX genes in hindbrain development during early embryogenesis RNA Polymerase II Pre-transcription Events Formation of TC-NER Pre-Incision Complex Transcription-Coupled Nucleotide Excision Repair (TC-NER) Dual incision in TC-NER Gap-filling DNA repair synthesis and ligation in TC-NER TP53 Regulates Transcription of DNA Repair Genes FGFR2 alternative splicing RNA polymerase II transcribes snRNA genes RNA polymerase II transcribes snRNA genes mRNA Capping mRNA Splicing - Major Pathway mRNA Splicing - Minor Pathway Processing of Capped Intron-Containing Pre-mRNA RNA Polymerase II Promoter Escape RNA Polymerase II Transcription Pre-Initiation And Promoter Opening RNA Polymerase II Transcription Initiation RNA Polymerase II Transcription Elongation RNA Polymerase II Transcription Initiation And Promoter Clearance RNA Pol II CTD phosphorylation and interaction with CE Signaling by FGFR2 IIIa TM Estrogen-dependent gene expression Inhibition of DNA recombination at telomere
Drugs
Diseases
GWAS		Metabolite levels ( 23823483) PR interval ( 32439900)	Age-related macular degeneration ( 21909106) Bitter alcoholic beverage consumption ( 31046077) Congenital heart disease (maternal effect) ( 28468790) Coronary artery disease ( 29212778) Height ( 20881960 25429064) Metabolite levels ( 23823483) White blood cell count ( 29403010)
Interacting Genes		24 interacting genes: ADAP1 APP CBX5 CEBPA CSNK2A1 CSTF2 EP300 GTF2A1L HNF4A HSF1 OTUD5 PCNA POLR2A POLR2B POU2AF1 PSIP1 RCOR1 REST RNF10 SDCBP SP1 TAF1 TBP TP53	19 interacting genes: BTF3 CALM1 CCNH CDK7 CTDP1 IKBKG ITCH LZTR1 MEN1 OTUD5 POLR2C POLR2D POLR2H POLR2L PTEN RPAP1 SNAR-B2 SUB1 ZSCAN1
Entrez ID		10923	5431
HPRD ID		02737	15943
Ensembl ID		ENSG00000113387	ENSG00000047315
Uniprot IDs		P53999 Q6IBA2	B4DH29 B4DHJ3 C9J2Y9 P30876
PDB IDs		1PCF 2C62 2PHE 4USG 6YCS 7E4W	5IY6 5IY7 5IY8 5IY9 5IYA 5IYB 5IYC 5IYD 6DRD 6O9L 6XRE 7LBM 9EHZ 9EI1 9EI3 9EI4
Enriched GO Terms of Interacting Partners?		Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process Chromatin Binding Regulation Of Transcription By RNA Polymerase II Regulation Of RNA Metabolic Process Nucleus Regulation Of Nucleobase-containing Compound Metabolic Process DNA Binding RNA Polymerase II-specific DNA-binding Transcription Factor Binding Regulation Of Gene Expression Regulation Of Macromolecule Biosynthetic Process Transcription Cis-regulatory Region Binding Positive Regulation Of Metabolic Process Positive Regulation Of Transcription By RNA Polymerase II DNA-templated Transcription Positive Regulation Of Macromolecule Metabolic Process Regulation Of Macromolecule Metabolic Process Positive Regulation Of RNA Biosynthetic Process Positive Regulation Of Nucleobase-containing Compound Metabolic Process Positive Regulation Of DNA-templated Transcription Regulation Of Primary Metabolic Process Positive Regulation Of RNA Metabolic Process Positive Regulation Of Macromolecule Biosynthetic Process Transcription Repressor Complex Negative Regulation Of Nucleobase-containing Compound Metabolic Process Positive Regulation Of Biosynthetic Process Negative Regulation Of Biosynthetic Process Regulation Of Metabolic Process Negative Regulation Of DNA-templated Transcription Negative Regulation Of RNA Biosynthetic Process RNA Metabolic Process Transcription By RNA Polymerase II Negative Regulation Of RNA Metabolic Process Nucleobase-containing Compound Biosynthetic Process Nucleoplasm Negative Regulation Of Macromolecule Biosynthetic Process STAT Family Protein Binding Negative Regulation Of Transcription By RNA Polymerase II Negative Regulation Of Metabolic Process Nucleic Acid Metabolic Process Chromatin Organization Rhythmic Process Euchromatin MRNA Transcription Negative Regulation Of Macromolecule Metabolic Process Cellular Response To Xenobiotic Stimulus RNA Polymerase II Core Promoter Sequence-specific DNA Binding Positive Regulation Of DNA-templated Transcription Initiation Cellular Response To Radiation DNA-binding Transcription Factor Binding	DNA-directed RNA Polymerase Complex RNA Polymerase II, Core Complex Nucleobase-containing Compound Biosynthetic Process Nucleus DNA-templated Transcription Transcription By RNA Polymerase II Transcription Factor TFIIK Complex DNA-directed RNA Polymerase Activity CAK-ERCC2 Complex RNA Metabolic Process Macromolecule Biosynthetic Process Nucleic Acid Metabolic Process Transcription Initiation At RNA Polymerase II Promoter Nucleoplasm RNA Polymerase II Promoter Clearance Macromolecule Metabolic Process Transcription Factor TFIIH Core Complex DNA-templated Transcription Initiation Transcription Factor TFIIH Holo Complex RNA Polymerase I Complex Nucleobase-containing Compound Metabolic Process RNA Polymerase III Complex Spindle Pole Regulation Of G1/S Transition Of Mitotic Cell Cycle Negative Regulation Of JNK Cascade Negative Regulation Of Organ Growth Protein-containing Complex Regulation Of Cell Cycle G1/S Phase Transition Cyclin-dependent Protein Kinase Holoenzyme Complex Transcription Elongation By RNA Polymerase II RNA Polymerase II CTD Heptapeptide Repeat S5 Kinase Activity Negative Regulation Of Intracellular Signal Transduction Negative Regulation Of Synaptic Vesicle Clustering Negative Regulation Of Type I Interferon Production Male Germ Cell Nucleus DNA-templated Transcription Elongation Negative Regulation Of Protein Localization To Endoplasmic Reticulum Negative Regulation Of High Voltage-gated Calcium Channel Activity Negative Regulation Of Ryanodine-sensitive Calcium-release Channel Activity Protein Stabilization CD4-positive, Alpha-beta T Cell Activation RNA Polymerase Complex Phosphatidylinositol-3,4-bisphosphate 3-phosphatase Activity Negative Regulation Of Keratinocyte Migration Inositol-1,3,4,5-tetrakisphosphate 3-phosphatase Activity Inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase Activity TFIIF-class Transcription Factor Complex Binding Negative Regulation Of Osteoblast Differentiation
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