CDC42 and H2BC13

Number of citations of the paper that reports this interaction (PubMedID 31478661)
0

Data Source:
BioGRID (pull down)

		CDC42	H2BC13
Description		cell division cycle 42	H2B clustered histone 13
Image			No pdb structure
GO Annotations	Cellular Component	Golgi Membrane Storage Vacuole Cytoplasm Endoplasmic Reticulum Membrane Centrosome Spindle Cytosol Cytoskeleton Plasma Membrane Cell-cell Junction Focal Adhesion Membrane Golgi Transport Complex Filopodium Dendrite Midbody Cell Leading Edge Leading Edge Membrane Protein-containing Complex Cytoplasmic Ribonucleoprotein Granule Cell Projection Neuron Projection Neuronal Cell Body Apical Part Of Cell Phagocytic Vesicle Spindle Midzone Extracellular Exosome Cell Periphery Mitotic Spindle Postsynapse Glutamatergic Synapse	Nucleosome Nucleus Nucleoplasm Chromosome Cytosol Extracellular Exosome
	Molecular Function	Nucleotide Binding GTPase Activity G Protein Activity Protein Binding GTP Binding Hydrolase Activity Protein Kinase Binding GTP-dependent Protein Binding Thioesterase Binding GBD Domain Binding Apolipoprotein A-I Receptor Binding Identical Protein Binding Ubiquitin Protein Ligase Activity	DNA Binding Protein Binding Structural Constituent Of Chromatin Protein Heterodimerization Activity
	Biological Process	Heart Process Cardiac Conduction System Development Cardiac Neural Crest Cell Migration Involved In Outflow Tract Morphogenesis Endocytosis Phagocytosis, Engulfment Actin Filament Organization Golgi Organization Regulation Of Mitotic Nuclear Division Nuclear Migration Establishment Or Maintenance Of Cell Polarity Signal Transduction Integrin-mediated Signaling Pathway Small GTPase-mediated Signal Transduction Nervous System Development Intracellular Protein Localization Anatomical Structure Morphogenesis Regulation Of Lamellipodium Assembly Positive Regulation Of Lamellipodium Assembly Substantia Nigra Development Establishment Of Cell Polarity Actin Cytoskeleton Organization Cell Differentiation Macrophage Differentiation Positive Regulation Of Cell Growth Positive Regulation Of Cell Migration Positive Regulation Of Pseudopodium Assembly Negative Regulation Of Protein-containing Complex Assembly Positive Regulation Of Cytokinesis Regulation Of Actin Cytoskeleton Organization Cell Junction Assembly Adherens Junction Organization Embryonic Heart Tube Development Establishment Or Maintenance Of Apical/basal Cell Polarity Dendritic Cell Migration Neuropilin Signaling Pathway Positive Regulation Of MAPK Cascade Host-mediated Perturbation Of Viral Process Establishment Of Epithelial Cell Apical/basal Polarity Filopodium Assembly Positive Regulation Of Pinocytosis Neuron Fate Determination Positive Regulation Of Cellular Component Organization Regulation Of Filopodium Assembly Positive Regulation Of Filopodium Assembly Regulation Of Stress Fiber Assembly Positive Regulation Of Stress Fiber Assembly Nucleus Localization Establishment Of Localization In Cell Establishment Of Golgi Localization Positive Regulation Of Phosphatidylinositol 3-kinase/protein Kinase B Signal Transduction Regulation Of Attachment Of Spindle Microtubules To Kinetochore Heart Contraction Wnt Signaling Pathway, Planar Cell Polarity Pathway Positive Regulation Of Epithelial Cell Proliferation Involved In Lung Morphogenesis Dendritic Spine Morphogenesis Cellular Response To Type II Interferon Organelle Transport Along Microtubule Endothelin Receptor Signaling Pathway Involved In Heart Process Regulation Of Postsynapse Organization Positive Regulation Of Substrate Adhesion-dependent Cell Spreading	Nucleosome Assembly
Pathways		GPVI-mediated activation cascade EGFR downregulation Regulation of actin dynamics for phagocytic cup formation Regulation of actin dynamics for phagocytic cup formation CD28 dependent Vav1 pathway EPHB-mediated forward signaling EPHB-mediated forward signaling DCC mediated attractive signaling Inactivation of CDC42 and RAC1 VEGFA-VEGFR2 Pathway Myogenesis Myogenesis RHO GTPases activate KTN1 RHO GTPases activate IQGAPs RHO GTPases activate PAKs RHO GTPases Activate WASPs and WAVEs RHO GTPases Activate WASPs and WAVEs RHO GTPases Activate Formins RHO GTPases Activate Formins MAPK6/MAPK4 signaling Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation G beta:gamma signalling through CDC42 CDC42 GTPase cycle RAC1 GTPase cycle RAC2 GTPase cycle RHOQ GTPase cycle RHOG GTPase cycle RHOJ GTPase cycle RHOU GTPase cycle RAC3 GTPase cycle RHOV GTPase cycle FCGR3A-mediated phagocytosis FCGR3A-mediated phagocytosis Factors involved in megakaryocyte development and platelet production	Recognition and association of DNA glycosylase with site containing an affected pyrimidine Cleavage of the damaged pyrimidine Recognition and association of DNA glycosylase with site containing an affected purine Recognition and association of DNA glycosylase with site containing an affected purine Cleavage of the damaged purine Cleavage of the damaged purine Meiotic synapsis Packaging Of Telomere Ends Pre-NOTCH Transcription and Translation Formation of the beta-catenin:TCF transactivating complex Formation of the beta-catenin:TCF transactivating complex PRC2 methylates histones and DNA Condensation of Prophase Chromosomes Oxidative Stress Induced Senescence Senescence-Associated Secretory Phenotype (SASP) DNA Damage/Telomere Stress Induced Senescence HDACs deacetylate histones HATs acetylate histones HATs acetylate histones SIRT1 negatively regulates rRNA expression ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression NoRC negatively regulates rRNA expression NoRC negatively regulates rRNA expression B-WICH complex positively regulates rRNA expression DNA methylation Transcriptional regulation by small RNAs Activation of anterior HOX genes in hindbrain development during early embryogenesis Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 Ub-specific processing proteases Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks Nonhomologous End-Joining (NHEJ) Processing of DNA double-strand break ends Deposition of new CENPA-containing nucleosomes at the centromere Assembly of the ORC complex at the origin of replication G2/M DNA damage checkpoint RNA Polymerase I Promoter Opening RNA Polymerase I Promoter Escape E3 ubiquitin ligases ubiquitinate target proteins RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function RUNX1 regulates transcription of genes involved in differentiation of HSCs Estrogen-dependent gene expression Meiotic recombination HCMV Early Events HCMV Late Events Transcriptional regulation of granulopoiesis Inhibition of DNA recombination at telomere Defective pyroptosis Negative Regulation of CDH1 Gene Transcription Amyloid fiber formation Chromatin modifications during the maternal to zygotic transition (MZT) Replacement of protamines by nucleosomes in the male pronucleus MLL4 and MLL3 complexes regulate expression of PPARG target genes in adipogenesis and hepatic steatosis MLL4 and MLL3 complexes regulate expression of PPARG target genes in adipogenesis and hepatic steatosis Regulation of endogenous retroelements by KRAB-ZFP proteins Regulation of endogenous retroelements by KRAB-ZFP proteins Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) Regulation of PD-L1(CD274) transcription
Drugs		Aminophosphonic acid-guanylate ester Guanosine-5'-Diphosphate
Diseases
GWAS		Colorectal cancer ( 25990418) Daytime sleep phenotypes ( 27126917) Extremely high intelligence ( 29520040) Gestational age at birth (maternal effect) ( 28877031) Gynecologic disease ( 31488892) Gynecologic disease (multivariate analysis) ( 31488892) Hip circumference adjusted for BMI ( 34021172) Immune response to smallpox vaccine (IL-6) ( 22610502) Liver enzyme levels (alkaline phosphatase) ( 33972514) Metabolite levels ( 23823483) Uterine fibroids ( 30194396 31249589 31488892 31649266) Uterine fibroids (MTAG) ( 31488892)
Interacting Genes		383 interacting genes: A2M AARS1 ACADM ACO1 ACO2 ACOT7 ACTR3 ADRM1 AGAP1 AGAP2 AHSG AKR1B1 ALDH18A1 ANAPC13 ANXA11 ANXA2 AP3D1 APEX1 APOH ARAP1 ARAP2 ARG1 ARHGAP1 ARHGAP10 ARHGAP11B ARHGAP17 ARHGAP20 ARHGAP22 ARHGAP26 ARHGAP27 ARHGAP31 ARHGAP32 ARHGAP35 ARHGAP39 ARHGAP40 ARHGAP44 ARHGDIA ARHGDIB ARHGDIG ARHGEF10 ARHGEF11 ARHGEF15 ARHGEF25 ARHGEF26 ARHGEF4 ARHGEF6 ARHGEF7 ARHGEF9 ARRB1 ARRB2 ATP5F1C ATP5IF1 ATP5MF ATP5PD ATP6V1A BAIAP2 BCAP31 BCCIP BCL2L13 BCR BIRC2 BLMH BNIP2 BRD10 BTF3 BZW2 CALML5 CAPNS1 CAPZB CARHSP1 CASP14 CASP3 CASP7 CBLL1 CBX3 CCN1 CDC42BPA CDC42BPB CDC42BPG CDC42EP1 CDC42EP2 CDC42EP3 CDC42EP4 CDC42EP5 CDC42SE1 CDC5L CDH1 CDKN2A CEBPA CFHR4 CGN CMPK1 CNBP CNOT1 COL1A1 COMT COPA COPE COPG1 CPN1 CRIP2 CSE1L CSN2 CSPG4 CTNNA1 DEF6 DEK DHFR DIAPH1 DIAPH2 DIAPH3 DNMBP DOCK7 DOCK8 DOCK9 DPYSL2 DSG1 DSP ECHS1 EDC4 EDF1 EEF1E1 EEF1G EHD2 EHD4 EIF2AK2 EIF3D EIF3F EIF5 EIF5B EPHA2 EPRS1 ERCC3 ERG28 ERICH6 ERRFI1 ETFA FAM13B FGD1 FGD2 FGD3 FGD4 FKBP10 FKBP1A FKBP3 FLNA FLNC FMN2 FMNL2 FNBP1 FNBP1L FNDC3B FTH1 G6PD GALNT2 GART GDI1 GIT2 GLS GMIP GNB1 GRB2 GRWD1 GSR GSTM5 H1-10 H1-5 H2BC13 HADH HADHB HDAC7 HDLBP HERC2 HLA-G HMGN1 HNRNPAB HNRNPUL2 HSD17B10 HYOU1 IARS1 IGF2BP1 IPO5 IQGAP1 IQGAP2 ITSN1 JPT2 KARS1 KAT5 KHDRBS1 KPNA2 KTN1 KYNU LARS1 LCK LGALS1 LGALS7 LONP1 LRIF1 LRP2 LYZ MAP2K3 MAP3K10 MAP3K11 MAP3K19 MAP3K4 MAP4 MAPRE1 MARCKSL1 MARK4 MASTL MATR3 MCF2L MCM3AP MCM6 MCM7 MDH1 MDK METAP2 MRM1 MRPL49 MSH2 MT-CO1 MTDH MUC12 MYO1C MYO6 MYO9A NAA15 NASP NCAPD2 NCF2 NEK6 NIBAN2 NOP2 NPLOC4 NQO1 NUDT21 NUP155 OCRL OLA1 OPHN1 P3H1 PABPC4 PAK1 PAK2 PAK3 PAK4 PAK5 PAK6 PALLD PARD3 PARD6A PARD6B PARD6G PAXX PCM1 PCNP PDCD5 PDE6C PDE6D PGD PGGT1B PHAX PHB2 PHPT1 PICALM PIK3R1 PLD1 PLEKHG1 PLEKHG2 PLEKHG3 PLEKHG4 PLEKHG4B PMS1 PPP2R1A PRDX3 PREX2 PRKCA PRKCG PRKCI PRKCZ PSAT1 PSIP1 PSMB1 PSMC5 PSMC6 PSMD11 PSMD12 PSMD3 PSME3 PXDN RAC2 RAP1GDS1 RARS1 RASGRF2 RBM8A RHOJ RIOK3 RO60 RPL22 RPL23 RPS15 RPS21 RPS6KB1 RRM1 S100A9 SDHA SEPTIN2 SERPINB1 SERPINB2 SERPINB3 SF1 SF3A2 SH3BGRL3 SH3D19 SLC16A3 SMC2 SNCA SNRNP70 SPATA13 SRGAP1 SRM SRP72 SRSF1 SSB SSX2IP ST13 STARD8 STAT1 STAU1 STMN2 SYNE1 TBC1D3F TBCA TCEAL3 TIAM1 TMED10 TMED9 TMOD3 TMX1 TNFRSF10B TNK2 TOR1AIP1 TP53 TPD52L2 TPM1 TRAF2 TRIM28 TRIM45 TRIM60 TRIO TRIP10 TRRAP TSFM TTC12 TUBB3 TXNL1 TYMS U2AF2 UBC UBE2L3 UBR1 UGDH UNC119 USP6 VARS1 VASP VAV1 VRK2 WAS WASF1 WASF2 WASL WIPF1 XIAP XPO1 YARS1 YWHAH ZNF175 ZNF234 ZNF415 ZNF420 ZNF622	5 interacting genes: AP2M1 CDC42 H2AB2 H2AB3 VHL
Entrez ID		998	8340
HPRD ID		00309	11898
Ensembl ID		ENSG00000070831	ENSG00000185130
Uniprot IDs		P60953	Q99880
PDB IDs		1A4R 1AJE 1AM4 1AN0 1CEE 1CF4 1DOA 1E0A 1EES 1GRN 1GZS 1KI1 1KZ7 1KZG 1NF3 2ASE 2DFK 2KB0 2NGR 2ODB 2QRZ 2WM9 2WMN 2WMO 3GCG 3QBV 3VHL 4DID 4ITR 4JS0 4YC7 4YDH 5CJP 5FI1 5HZK 5UPK 5UPL 6AJ4 6AJL 6SIU 6SUP 6TKY 6TKZ 7S0Y 8I5F
Enriched GO Terms of Interacting Partners?		Cytosol Cytoplasm Regulation Of Small GTPase Mediated Signal Transduction GTPase Activator Activity Regulation Of Intracellular Signal Transduction Small GTPase Binding Guanyl-nucleotide Exchange Factor Activity Actin Filament-based Process Small GTPase-mediated Signal Transduction Actin Cytoskeleton Organization Intracellular Signaling Cassette Lamellipodium Intracellular Signal Transduction Regulation Of Signal Transduction Cytoskeleton Organization RNA Binding Regulation Of Signaling Regulation Of Cell Communication Rho Protein Signal Transduction Extracellular Exosome Organelle Organization Cadherin Binding Cell-cell Junction Regulation Of Actin Cytoskeleton Organization Cell Projection Organization Cell Cortex PAR Polarity Complex Biological_process Regulation Of Actin Filament-based Process Ruffle Actin Filament Organization Regulation Of Cytoskeleton Organization Regulation Of Cell Shape Regulation Of Cellular Component Organization Protein Serine Kinase Activity Supramolecular Fiber Organization Anchoring Junction Regulation Of Protein Metabolic Process Actin Cytoskeleton Cellular Component Assembly Regulation Of Programmed Cell Death Regulation Of Actin Filament Organization Actin Binding Cytoskeleton Positive Regulation Of Cellular Component Organization Regulation Of Supramolecular Fiber Organization Regulation Of Cell Morphogenesis Actin Filament Protein Serine/threonine Kinase Activity Regulation Of Rho Protein Signal Transduction	Amyloid Fibril Formation Endothelin Receptor Signaling Pathway Involved In Heart Process GBD Domain Binding Storage Vacuole Cellular Component Assembly Supramolecular Fiber Organization Protein-containing Complex Organization Protein-containing Complex Assembly Positive Regulation Of Interleukin-6-mediated Signaling Pathway Ripoptosome Assembly Death Domain Binding Ripoptosome Assembly Involved In Necroptotic Process Nucleosome Heterochromatin Formation Nucleosome Assembly Euchromatin Nucleosome Organization Structural Constituent Of Chromatin Positive Regulation Of Endocytosis Apolipoprotein A-I Receptor Binding Neuropilin Signaling Pathway Signal Sequence Binding Negative Regulation Of Gene Expression, Epigenetic Extrinsic Component Of Presynaptic Endocytic Zone Membrane Positive Regulation Of MiRNA Processing Peptidyl-serine Autophosphorylation Protein-DNA Complex Assembly Positive Regulation Of Pinocytosis G Protein-coupled Receptor Signaling Pathway Involved In Heart Process Cardiac Neural Crest Cell Migration Involved In Outflow Tract Morphogenesis Establishment Of Golgi Localization Postsynapse Positive Regulation Of Epithelial Cell Proliferation Involved In Lung Morphogenesis Positive Regulation Of Synaptic Vesicle Endocytosis Positive Regulation Of Synaptic Vesicle Recycling Postsynaptic Neurotransmitter Receptor Internalization Transcription Elongation Factor Activity Ripoptosome Death-inducing Signaling Complex Positive Regulation Of Necroptotic Process Regulation Of Epithelial Cell Proliferation Involved In Lung Morphogenesis JUN Kinase Kinase Kinase Activity Necroptotic Signaling Pathway Leading Edge Membrane Thioesterase Binding Neuron Fate Determination Golgi Transport Complex Positive Regulation Of Programmed Necrotic Cell Death Epigenetic Regulation Of Gene Expression Endothelin Receptor Signaling Pathway
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