SARNP and DDX39B

Number of citations of the paper that reports this interaction (PMID 14667819)
24

Data Source:
HPRD (in vivo, in vitro, two hybrid)

		SARNP	DDX39B
Gene Name		SAP domain containing ribonucleoprotein	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
Image
Gene Ontology Annotations	Cellular Component	Transcription Export Complex Nucleus Nucleoplasm Nuclear Speck Intracellular Membrane-bounded Organelle	Transcription Export Complex Nucleus Nucleoplasm Spliceosomal Complex U4 SnRNP U6 SnRNP Cytoplasm Nuclear Speck
	Molecular Function	DNA Binding Poly(A) RNA Binding	ATP-dependent RNA Helicase Activity Protein Binding ATP Binding RNA-dependent ATPase Activity U6 SnRNA Binding U4 SnRNA Binding ATP-dependent Protein Binding Poly(A) RNA Binding
	Biological Process	Transcription, DNA-templated Regulation Of Transcription, DNA-templated MRNA Export From Nucleus Regulation Of Translation	Spliceosomal Complex Assembly MRNA Splicing, Via Spliceosome MRNA Export From Nucleus RNA Splicing RNA Secondary Structure Unwinding Positive Regulation Of DNA-templated Transcription, Elongation Viral MRNA Export From Host Cell Nucleus Negative Regulation Of DNA Damage Checkpoint
Pathways
Drugs
Diseases
GWAS
Protein-Protein Interactions		4 interactors: CSNK2B DDX39A DDX39B VHL	24 interactors: ALYREF BARD1 DDX39A DNM2 EXOSC9 FANCA HIPK2 HNRNPLL IL7R NCBP2 PIAS2 RBM39 RPS15A SARNP SREK1 STRN4 TDG THOC3 THOC5 THOC6 THOC7 TUBB3 YWHAG ZHX1
Entrez ID		84324	7919
HPRD ID		16716	00805
Ensembl ID		ENSG00000205323	ENSG00000198563
Uniprot IDs		P82979	Q13838
PDB IDs		2DO1	1T5I 1T6N 1XTI 1XTJ 1XTK
Enriched GO Terms of Interacting Partners?		MRNA Export From Nucleus RNA Export From Nucleus Nuclear Export MRNA Transport RNA Transport RNA Localization RNA Secondary Structure Unwinding MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Negative Regulation Of DNA Damage Checkpoint Negative Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Nucleocytoplasmic Transport Nuclear Transport Viral MRNA Export From Host Cell Nucleus Positive Regulation Of Activin Receptor Signaling Pathway RNA Splicing Adiponectin-activated Signaling Pathway Endothelial Tube Morphogenesis MRNA Processing Regulation Of DNA Damage Checkpoint MRNA Metabolic Process Negative Regulation Of Blood Vessel Endothelial Cell Migration RNA Processing Regulation Of Activin Receptor Signaling Pathway Cellular Macromolecular Complex Assembly Regulation Of Transcription From RNA Polymerase II Promoter In Response To Hypoxia Intracellular Transport Of Virus Negative Regulation Of Cell Proliferation Positive Regulation Of Cellular Metabolic Process Positive Regulation Of DNA-templated Transcription, Elongation Cytoplasmic Transport Negative Regulation Of Endothelial Cell Migration Regulation Of Cell Cycle Checkpoint Positive Regulation Of Pathway-restricted SMAD Protein Phosphorylation Regulation Of Blood Vessel Endothelial Cell Migration Negative Regulation Of Epithelial Cell Migration Regulation Of Transcription From RNA Polymerase II Promoter In Response To Stress Regulation Of DNA-templated Transcription, Elongation Regulation Of Pathway-restricted SMAD Protein Phosphorylation Regulation Of DNA-templated Transcription In Response To Stress Spliceosomal Complex Assembly Positive Regulation Of Metabolic Process Cell Morphogenesis	MRNA Export From Nucleus RNA Export From Nucleus Viral MRNA Export From Host Cell Nucleus MRNA Metabolic Process Nuclear Export MRNA Transport RNA Transport RNA Localization MRNA Processing RNA Splicing Intracellular Transport Of Virus RNA Processing Nucleocytoplasmic Transport Nuclear Transport RNA Metabolic Process Nucleobase-containing Compound Metabolic Process Gene Expression Nitrogen Compound Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Cytoplasmic Transport Viral Life Cycle Viral Process Intracellular Transport Establishment Of Localization In Cell Cellular Metabolic Process Cellular Localization Regulation Of RNA Export From Nucleus Positive Regulation Of Gene Expression Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process RNA Biosynthetic Process Positive Regulation Of DNA-templated Transcription, Elongation Nuclear-transcribed MRNA Catabolic Process Regulation Of RNA Metabolic Process MRNA Catabolic Process Termination Of RNA Polymerase II Transcription RNA Catabolic Process Regulation Of Intracellular Transport Aromatic Compound Catabolic Process Regulation Of Nucleocytoplasmic Transport Transcription, DNA-templated Cellular Response To DNA Damage Stimulus Transport Regulation Of DNA-templated Transcription, Elongation MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Metabolic Process SnRNA Export From Nucleus
Tagcloud ?			22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Difference) ?			22c 348c acc agc agt amazon asymptomatic bat1 brazilian categorized cc complicated ga gg ggt haplotypes helicase il6 malaria mild ncoi nlaiii plasmodium polymorphisms postulation restriction snps uninfected vivax
Tagcloud (Intersection) ?