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SNRPG and LSM3
Number of citations of the paper that reports this interaction (PMID
22365833
)
24
Data Source:
BioGRID
(two hybrid)
SNRPG
LSM3
Gene Name
small nuclear ribonucleoprotein polypeptide G
LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Image
No pdb structure
Gene Ontology Annotations
Cellular Component
Nucleoplasm
Spliceosomal Complex
U7 SnRNP
U1 SnRNP
U4 SnRNP
U12-type Spliceosomal Complex
Cytosol
Small Nuclear Ribonucleoprotein Complex
Methylosome
SMN-Sm Protein Complex
Catalytic Step 2 Spliceosome
Nucleus
Cytosol
Catalytic Step 2 Spliceosome
Molecular Function
Protein Binding
Poly(A) RNA Binding
Protein Binding
Poly(A) RNA Binding
Biological Process
Spliceosomal Complex Assembly
Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
Transcription From RNA Polymerase II Promoter
Termination Of RNA Polymerase II Transcription
Histone MRNA Metabolic Process
RNA Splicing
Gene Expression
MRNA 3'-end Processing
NcRNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
MRNA Splicing, Via Spliceosome
MRNA Processing
Gene Expression
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Pathways
mRNA Splicing
Processing of Capped Intron-Containing Pre-mRNA
RNA Polymerase II Transcription
Metabolism of non-coding RNA
mRNA Splicing - Minor Pathway
mRNA Splicing - Major Pathway
Cleavage of Growing Transcript in the Termination Region
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
snRNP Assembly
Processing of Capped Intronless Pre-mRNA
SLBP independent Processing of Histone Pre-mRNAs
RNA Polymerase II Transcription Termination
mRNA decay by 5' to 3' exoribonuclease
Deadenylation-dependent mRNA decay
Drugs
Diseases
GWAS
Protein-Protein Interactions
19 interactors:
C14orf1
CLNS1A
COPS6
CRMP1
DDIT4L
DDX20
FHL3
GDF9
GEMIN5
GEMIN6
IL7R
KIAA1377
LSM3
SMN2
SNRPD3
SNRPE
SNRPF
TACC1
TLE1
28 interactors:
CEP95
CLNS1A
DLX4
EEF1A1
GDF9
GSTA1
KEAP1
LSM1
LSM10
LSM2
LSM5
LSM6
LSM7
LSM8
SF3B2
SMN1
SNRPD1
SNRPD3
SNRPE
SNRPG
TCL1A
THOC5
UTP14A
WDR77
WDR83
XPC
XRN2
YBX1
Entrez ID
6637
27258
HPRD ID
04646
06283
Ensembl ID
ENSG00000143977
Uniprot IDs
P62308
P62310
PDB IDs
1VU2
1VU3
2Y9A
2Y9B
2Y9C
2Y9D
3CW1
3PGW
3S6N
4F77
Enriched GO Terms of Interacting Partners
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Spliceosomal SnRNP Assembly
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
Ribonucleoprotein Complex Assembly
RNA Splicing
MRNA Processing
Ribonucleoprotein Complex Biogenesis
MRNA Metabolic Process
RNA Processing
NcRNA Metabolic Process
Cellular Macromolecular Complex Assembly
Histone MRNA Metabolic Process
Termination Of RNA Polymerase II Transcription
Cellular Component Assembly
Spliceosomal Complex Assembly
DNA-templated Transcription, Termination
MRNA 3'-end Processing
RNA Metabolic Process
RNA 3'-end Processing
Gene Expression
Nucleobase-containing Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nitrogen Compound Metabolic Process
Interleukin-7-mediated Signaling Pathway
Oocyte Growth
Oogenesis
Regulation Of Progesterone Secretion
Female Gamete Generation
Negative Regulation Of T Cell Mediated Cytotoxicity
Transcription From RNA Polymerase II Promoter
Cell Growth
Pyrimidine Nucleobase Catabolic Process
Cullin Deneddylation
Anatomical Structure Development
MRNA Processing
RNA Splicing
MRNA Metabolic Process
RNA Processing
RNA Splicing, Via Transesterification Reactions
MRNA Splicing, Via Spliceosome
RNA Metabolic Process
Cellular Nitrogen Compound Metabolic Process
Nucleobase-containing Compound Metabolic Process
Gene Expression
Spliceosomal SnRNP Assembly
Nitrogen Compound Metabolic Process
Heterocycle Metabolic Process
Cellular Aromatic Compound Metabolic Process
Histone MRNA Metabolic Process
Ribonucleoprotein Complex Biogenesis
Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay
Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic
Ribonucleoprotein Complex Assembly
NcRNA Metabolic Process
Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
DNA-templated Transcription, Termination
RNA Catabolic Process
Cellular Metabolic Process
Termination Of RNA Polymerase II Transcription
Aromatic Compound Catabolic Process
Nuclear-transcribed MRNA Catabolic Process
Spliceosomal Complex Assembly
MRNA Catabolic Process
MRNA 3'-end Processing
Cellular Macromolecule Catabolic Process
Cellular Macromolecular Complex Assembly
RNA 3'-end Processing
Metabolic Process
Transcription From RNA Polymerase II Promoter
Cellular Process
Catabolic Process
Maturation Of SSU-rRNA
Transcription, DNA-templated
RNA Biosynthetic Process
Ribosomal Small Subunit Biogenesis
Oocyte Growth
Nucleotide-excision Repair, DNA Damage Recognition
Cellular Component Assembly
Regulation Of Stem Cell Division
Negative Regulation Of DNA Damage Checkpoint
Secretory Columnal Luminar Epithelial Cell Differentiation Involved In Prostate Glandular Acinus Development
Regulation Of Progesterone Secretion
Proteasomal Ubiquitin-independent Protein Catabolic Process
CRD-mediated MRNA Stabilization
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