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SNRPB2 and HOMEZ
Number of citations of the paper that reports this interaction (PubMedID
25416956
)
56
Data Source:
BioGRID
(two hybrid, two hybrid)
SNRPB2
HOMEZ
Description
small nuclear ribonucleoprotein polypeptide B2
homeobox and leucine zipper encoding
Image
GO Annotations
Cellular Component
Fibrillar Center
Nucleus
Nucleoplasm
Spliceosomal Complex
U2-type Spliceosomal Complex
U1 SnRNP
U2 SnRNP
Nuclear Speck
Cytoplasmic Ribonucleoprotein Granule
U2-type Precatalytic Spliceosome
U2-type Catalytic Step 2 Spliceosome
Catalytic Step 2 Spliceosome
Spliceosomal SnRNP Complex
Ribonucleoprotein Complex
Chromatin
Nucleus
Nucleoplasm
Nucleolus
Cytosol
Molecular Function
Nucleic Acid Binding
RNA Binding
Protein Binding
U1 SnRNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA Binding
Protein Binding
Biological Process
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
U2-type Prespliceosome Assembly
Regulation Of Transcription By RNA Polymerase II
Pathways
mRNA Splicing - Major Pathway
Drugs
Diseases
GWAS
Food allergy (maternal genetic effects) (
29489655
)
Metabolite levels (
23823483
)
Response to haloperidol in schizophrenia (
29503163
)
Height (
31562340
)
High light scatter reticulocyte count (
32888494
)
High light scatter reticulocyte percentage of red cells (
32888494
)
Hip circumference adjusted for BMI (
34021172
)
Mean platelet volume (
32888494
)
Pulse pressure (
27841878
)
Reticulocyte count (
32888494
)
Serum alkaline phosphatase levels (
33547301
)
Systolic blood pressure (
27841878
)
Interacting Genes
26 interacting genes:
ALAS1
CALM1
CEBPA
CMTM6
DHX9
ERBB3
FOXP1
GABPB1
GABPB2
GOLGA2
HMBOX1
HNRNPUL1
HOMEZ
HTATSF1
MCM6
MTUS2
NAP1L5
PICK1
PNMA1
PTEN
SMN2
SNRPA1
SUGP1
TRIM23
TRIM27
ZBTB14
114 interacting genes:
ACTR10
AEN
ANKRD11
ANKRD2
ARHGAP9
ASB6
AXIN1
BIVM
BYSL
C2orf42
CBX8
CCDC13
CCDC187
CCHCR1
CCNK
CDC7
CENPS
CENPS-CORT
CFAP206
CTNNA3
DEF6
DGCR6
DHX16
DNTTIP1
DRC4
EBF1
EIF4E2
ELOA
ENKD1
FAM90A1
FARS2
GFAP
GPANK1
GRB2
HOXC8
HSF2BP
IL16
INO80B
JAKMIP2
KIFC3
KPNA2
LENG1
LGALS4
LMO1
LMO3
LNX1
LRRC7
LSM4
MAD2L1BP
MAFG
MAPK1
MED18
MORF4L2
MOS
MRPL11
NCK1
NCK2
NEIL2
NEK6
NXF1
OSGIN1
PARVG
PHF1
PHF19
PIBF1
PIN1
PLEKHA7
POLDIP3
PRKAA1
PRKAA2
PRPF18
PSMA1
RASL10A
RBM39
RNF8
RPGR
RPL9
RPP25
RPS25
SCNM1
SDCBP
SEC23A
SH3RF2
SMARCB1
SMARCD1
SMYD1
SNRPB2
SUMO2
SUMO3
TARS2
TBC1D30
TCEA2
TCEANC
TEAD4
TLE5
TRAF4
TSGA10IP
TXK
USF1
VEZF1
VPS9D1
ZBTB25
ZBTB7A
ZMYND19
ZNF165
ZNF250
ZNF280C
ZNF35
ZNF417
ZNF580
ZNF629
ZNF688
ZNF76
ZSCAN5B
Entrez ID
6629
57594
HPRD ID
04628
12167
Ensembl ID
ENSG00000125870
ENSG00000290292
Uniprot IDs
P08579
Q8IX15
PDB IDs
1A9N
5MQF
5O9Z
5XJC
5YZG
5Z56
5Z57
5Z58
6AH0
6AHD
6FF7
6ICZ
6ID0
6ID1
6QDV
6QX9
6Y53
6Y5Q
7A5P
7ABG
7ABI
7EVO
7VPX
7W59
7W5A
7W5B
8C6J
8CH6
8H6E
8H6J
8H6K
8H6L
8HK1
8I0P
8I0R
8I0S
8I0T
8I0U
8I0V
8I0W
8QO9
8QXD
8QZS
8R08
8R09
8R0A
8R0B
8RM5
9FMD
2ECC
2YS9
Enriched GO Terms of Interacting Partners
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Identical Protein Binding
Nucleoplasm
Nucleus
RNA Splicing
RNA Splicing, Via Transesterification Reactions
Single-stranded 3'-5' DNA Helicase Activity
RISC Complex Binding
MRNA Metabolic Process
CRD-mediated MRNA Stability Complex
MRNA Processing
Spliceosomal Complex Assembly
Importin-alpha Family Protein Binding
CRD-mediated MRNA Stabilization
Negative Regulation Of Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
RNA Stem-loop Binding
Cytoplasmic Ribonucleoprotein Granule
Protein-RNA Complex Assembly
MRNA Splicing, Via Spliceosome
Meiotic Spindle Assembly
Positive Regulation Of Cytoplasmic Translation
DNA-templated Transcription Termination
Regulation Of Viral Transcription
Regulation Of Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay
Meiotic Spindle Organization
Macromolecule Metabolic Process
Transcription Cis-regulatory Region Binding
Nucleic Acid Metabolic Process
Alternative MRNA Splicing, Via Spliceosome
PML Body
U2-type Prespliceosome Assembly
U2 SnRNP
U2-type Spliceosomal Complex
RNA Metabolic Process
Positive Regulation Of Macromolecule Biosynthetic Process
Dendritic Spine Organization
Response To Stress
Protein Binding
Positive Regulation Of Biosynthetic Process
RNA Polymerase I Transcription Regulatory Region Sequence-specific DNA Binding
3'-5' DNA/RNA Helicase Activity
Regulation Of Cytoplasmic Translation
DNA-templated Viral Transcription
Regulatory Region RNA Binding
Negative Regulation Of Synaptic Vesicle Clustering
Negative Regulation Of Organ Growth
Regulation Of Actin Nucleation
Telomere-telomerase Complex Assembly
DNA Helicase Activity
RNA Processing
Nucleic Acid Binding
Nucleus
Nucleoplasm
Protein Binding
Regulation Of DNA-templated Transcription
Regulation Of RNA Biosynthetic Process
Regulation Of RNA Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Regulation Of Primary Metabolic Process
Ciliary Basal Body
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
Histone H2BS36 Kinase Activity
[hydroxymethylglutaryl-CoA Reductase (NADPH)] Kinase Activity
Regulation Of Metabolic Process
Nucleic Acid Metabolic Process
Zinc Ion Binding
Nuclear Speck
Zonula Adherens Maintenance
Regulation Of Translation Initiation In Response To Endoplasmic Reticulum Stress
Protein Localization To Lipid Droplet
Microtubule Cytoskeleton
Positive Regulation Of DNA Repair
Centrosome
Cytoskeletal Anchor Activity
Positive Regulation Of Translation In Response To Endoplasmic Reticulum Stress
DNA Binding
Cellular Response To Stress
Adherens Junction Maintenance
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Tubulin Deacetylation
Negative Regulation Of Hepatocyte Apoptotic Process
AMP-activated Protein Kinase Activity
Positive Regulation Of DNA Metabolic Process
Protein K6-linked Ubiquitination
Regulation Of DNA-templated Transcription Elongation
DNA Damage Response
Regulation Of Translational Initiation
Regulation Of Sister Chromatid Segregation
Microtubule Cytoskeleton Organization
Positive Regulation Of Translation In Response To Stress
Histone H3K36me3 Reader Activity
Regulation Of Tubulin Deacetylation
Lipid Droplet Disassembly
Macromolecule Metabolic Process
Nucleobase-containing Compound Metabolic Process
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Tagcloud (Intersection)
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