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SFPQ and MIR29B1
Number of citations of the paper that reports this interaction (PubMedID
28431233
)
0
Data Source:
BioGRID
(unspecified method)
SFPQ
MIR29B1
Description
splicing factor proline and glutamine rich
microRNA 29b-1
Image
No pdb structure
GO Annotations
Cellular Component
Chromatin
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Nuclear Matrix
Nuclear Speck
Dendrite
Paraspeckles
RNA Polymerase II Transcription Regulator Complex
Extracellular Space
Nucleus
Cytoplasm
Mitochondrion
RISC Complex
Extracellular Exosome
Extracellular Vesicle
Molecular Function
Transcription Cis-regulatory Region Binding
Nucleic Acid Binding
DNA Binding
Chromatin Binding
RNA Binding
Protein Binding
Protein Homodimerization Activity
Histone Deacetylase Binding
MRNA 3'-UTR Binding
LncRNA Binding
MRNA Base-pairing Post-transcriptional Repressor Activity
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Alternative MRNA Splicing, Via Spliceosome
Double-strand Break Repair Via Homologous Recombination
Activation Of Innate Immune Response
Immune System Process
DNA Repair
DNA Recombination
Chromatin Remodeling
Regulation Of DNA-templated Transcription
MRNA Processing
DNA Damage Response
RNA Splicing
Regulation Of Circadian Rhythm
Negative Regulation Of Circadian Rhythm
Innate Immune Response
Positive Regulation Of Sister Chromatid Cohesion
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Rhythmic Process
Chromosome Organization
Regulation Of Cell Cycle
Dendritic Transport Of Messenger Ribonucleoprotein Complex
Positive Regulation Of Oxidative Stress-induced Intrinsic Apoptotic Signaling Pathway
Negative Regulation Of Cytokine-mediated Signaling Pathway
Negative Regulation Of Cell Population Proliferation
Positive Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Extracellular Matrix Disassembly
Negative Regulation Of Epithelial To Mesenchymal Transition
Positive Regulation Of Triglyceride Biosynthetic Process
Positive Regulation Of Cell Migration
Negative Regulation Of Cell Migration
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Collagen Biosynthetic Process
Negative Regulation Of Type III Interferon Production
Negative Regulation Of Rac Protein Signal Transduction
MiRNA-mediated Post-transcriptional Gene Silencing
MiRNA-mediated Gene Silencing By Inhibition Of Translation
MiRNA-mediated Gene Silencing By MRNA Destabilization
Epigenetic Regulation Of Gene Expression
Positive Regulation Of Apoptotic Process
Positive Regulation Of Fat Cell Differentiation
Positive Regulation Of Osteoblast Differentiation
Negative Regulation Of Epithelial Cell Proliferation
Negative Regulation Of Protein Secretion
Negative Regulation Of Phosphatidylinositol 3-kinase/protein Kinase B Signal Transduction
Regulation Of Membrane Repolarization
Regulation Of Blood Vessel Remodeling
Negative Regulation Of Circulating Fibrinogen Levels
Negative Regulation Of Canonical Wnt Signaling Pathway
Positive Regulation Of Canonical Wnt Signaling Pathway
Cellular Response To Virus
Negative Regulation Of Interleukin-32 Production
Negative Regulation Of Extracellular Matrix Assembly
Negative Regulation Of Non-canonical NF-kappaB Signal Transduction
Negative Regulation Of Potassium Ion Transmembrane Transport
Positive Regulation Of Mitochondrial Membrane Permeability Involved In Apoptotic Process
Negative Regulation Of Oxidative Stress-induced Intrinsic Apoptotic Signaling Pathway
Negative Regulation Of Amyloid-beta Formation
Negative Regulation Of Mesenchymal Stem Cell Proliferation
Negative Regulation Of Amyloid Precursor Protein Catabolic Process
Negative Regulation Of Cellular Response To Transforming Growth Factor Beta Stimulus
Regulation Of Aorta Morphogenesis
Negative Regulation Of Collagen Fibril Organization
Negative Regulation Of Matrix Metallopeptidase Secretion
Regulation Of Epithelium Regeneration
Negative Regulation Of Intestinal Epithelial Cell Development
Negative Regulation Of G1/S Transition Of Mitotic Cell Cycle
Pathways
PTK6 Regulates Proteins Involved in RNA Processing
Suppression of apoptosis
Drugs
Copper
Artenimol
Diseases
GWAS
Allergic disease (asthma, hay fever or eczema) (
29083406
)
Endometrial cancer (
21499250
)
Hip circumference (
28552196
)
Pancreatic cancer (
25086665
)
Waist-to-hip ratio adjusted for BMI (age >50) (
26426971
)
Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) (
26426971
)
Interacting Genes
120 interacting genes:
APBB1
AR
CD2BP2
CEBPA
CEP55
CPSF7
CSNK2A1
CTTN
DDX17
DMRTB1
ERG
ESR1
EXOSC5
EXOSC8
FHL2
FMR1
FUS
FXR1
FXR2
GAS7
H3-4
JPT1
KRT31
LAMTOR5
LINC00624
LINC01554
MIR1-1
MIR1-2
MIR106A
MIR106B
MIR107
MIR10B
MIR122
MIR128-1
MIR128-2
MIR138-1
MIR138-2
MIR140
MIR141
MIR143
MIR145
MIR155
MIR15A
MIR15B
MIR16-1
MIR16-2
MIR17
MIR18A
MIR18B
MIR199A1
MIR199A2
MIR19A
MIR19B1
MIR19B2
MIR200A
MIR200B
MIR200C
MIR205
MIR206
MIR20A
MIR20B
MIR21
MIR214
MIR221
MIR222
MIR25
MIR29A
MIR29B1
MIR29B2
MIR29C
MIR31
MIR34A
MIR34B
MIR34C
MIR363
MIR429
MIR451A
MIR7-1
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR9-3
MIR92A1
MIR92A2
MIR93
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
NONO
OGT
PIN1
PPARG
PRPF40A
PSPC1
PTBP1
RAC1
SF1
SF3B4
SIN3A
SMAD5
SNRPA
SREK1
TCERG1
TFIP11
TOP1
UBC
UBE2I
VIM
WBP4
ZMYM2
72 interacting genes:
APOBEC3B
C1QBP
DARS1
DDX1
DDX21
DDX3X
DHX36
EIF2AK2
EPRS1
FAM98A
FUS
G3BP2
HARS2
HNRNPA0
HNRNPA1
HNRNPA2B1
HNRNPA3
HNRNPF
HNRNPH1
HNRNPH2
HNRNPH3
HNRNPK
HNRNPL
HNRNPM
HNRNPR
IGF2BP1
IGF2BP2
IGF2BP3
KARS1
KNOP1
LARP7
LIN28A
LIN28B
LRPPRC
MARS1
MATR3
MSI1
MSI2
MYEF2
NOL6
NONO
PDCD11
PLOD1
PRMT1
PTBP1
PTBP3
PUF60
PURA
RBFOX2
RBM14
RBM4
RBM47
RBMS2
RTCB
SF3B1
SF3B3
SFPQ
SPOUT1
STRBP
SUGP2
SYNCRIP
TAF15
TRA2A
TRA2B
TRIM25
TRIM71
UPF1
UTP20
YBX1
YBX3
ZFR
ZNF346
Entrez ID
6421
407024
HPRD ID
07284
Ensembl ID
ENSG00000116560
ENSG00000283797
Uniprot IDs
A0A384N5Z8
P23246
Q86VG2
PDB IDs
4WII
4WIJ
4WIK
5WPA
6NCQ
6OWJ
6WMZ
7LRQ
7LRU
7PU5
7SP0
7UJ1
7UK1
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
MRNA 3'-UTR Binding
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
MiRNA-mediated Gene Silencing By Inhibition Of Translation
MiRNA-mediated Gene Silencing By MRNA Destabilization
Regulation Of Gene Expression
Extracellular Vesicle
Negative Regulation Of Translation
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Metabolic Process
MRNA Destabilization
RNA Destabilization
Positive Regulation Of MRNA Catabolic Process
Negative Regulation Of Cell Motility
Regulation Of Metabolic Process
Negative Regulation Of Cell Migration
Negative Regulation Of Locomotion
Regulation Of MRNA Stability
Positive Regulation Of MRNA Metabolic Process
Regulation Of RNA Stability
Negative Regulation Of Angiogenesis
Negative Regulation Of Cytokine Production
Negative Regulation Of Vasculature Development
Regulation Of Translation
Negative Regulation Of Vascular Endothelial Growth Factor Production
Regulation Of Angiogenesis
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Regulation Of MRNA Metabolic Process
Regulation Of Vasculature Development
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Negative Regulation Of Signal Transduction
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Protein Metabolic Process
Negative Regulation Of Multicellular Organismal Process
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of Endothelial Cell Migration
Negative Regulation Of Signaling
Negative Regulation Of Cell Communication
Negative Regulation Of Developmental Process
RNA Binding
Nucleic Acid Binding
RNA Processing
RNA Splicing
RNA Metabolic Process
Nucleic Acid Metabolic Process
MRNA Processing
MRNA Binding
MRNA Metabolic Process
Regulation Of MRNA Metabolic Process
Nucleobase-containing Compound Metabolic Process
Regulation Of RNA Splicing
Post-transcriptional Regulation Of Gene Expression
Nucleus
Ribonucleoprotein Complex
Macromolecule Metabolic Process
MRNA Splicing, Via Spliceosome
Negative Regulation Of MRNA Metabolic Process
Regulation Of MRNA Processing
RNA Splicing, Via Transesterification Reactions
Regulation Of Translation
Regulation Of MRNA Splicing, Via Spliceosome
MRNA 3'-UTR Binding
MiRNA Binding
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Cytoplasmic Stress Granule
Negative Regulation Of RNA Catabolic Process
Spliceosomal Complex
Negative Regulation Of MRNA Catabolic Process
Negative Regulation Of Translation
RNA Stabilization
Regulation Of Macromolecule Metabolic Process
Catalytic Step 2 Spliceosome
Regulation Of Primary Metabolic Process
Nucleoplasm
MRNA Stabilization
Regulation Of RNA Stability
Positive Regulation Of Gene Expression
Regulation Of MRNA Stability
Positive Regulation Of Macromolecule Biosynthetic Process
Regulation Of Metabolic Process
Positive Regulation Of Biosynthetic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Cytoplasmic Translation
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Metabolic Process
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