UPF1 and DCP2

Number of citations of the paper that reports this interaction (PMID 12417715)
126

Data Source:
HPRD (in vivo)

		UPF1	DCP2
Gene Name		UPF1 regulator of nonsense transcripts homolog (yeast)	decapping mRNA 2
Image			No pdb structure
Gene Ontology Annotations	Cellular Component	Chromatin Cytoplasmic MRNA Processing Body Nucleus Nucleoplasm Cytoplasm Cytosol Exon-exon Junction Complex Supraspliceosomal Complex	Cytoplasmic MRNA Processing Body Nucleoplasm Cytosol RISC Complex Cell Junction Intracellular Membrane-bounded Organelle
	Molecular Function	DNA Binding Chromatin Binding RNA Binding ATP-dependent RNA Helicase Activity Helicase Activity Protein Binding ATP Binding Zinc Ion Binding Poly(A) RNA Binding	RNA Binding Protein Binding Exoribonuclease Activity, Producing 5'-phosphomonoesters Manganese Ion Binding M7G(5')pppN Diphosphatase Activity
	Biological Process	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Nuclear-transcribed MRNA Catabolic Process DNA Replication DNA Repair MRNA Export From Nucleus Regulation Of Translational Termination Dosage Compensation By Inactivation Of X Chromosome Gene Expression Histone MRNA Catabolic Process	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay MRNA Catabolic Process Gene Expression Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Histone MRNA Catabolic Process RNA Phosphodiester Bond Hydrolysis, Exonucleolytic
Pathways		Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) Nonsense-Mediated Decay (NMD) Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)	Regulation of mRNA stability by proteins that bind AU-rich elements KSRP destabilizes mRNA ATF4 activates genes mRNA decay by 5' to 3' exoribonuclease Tristetraprolin (TTP) destabilizes mRNA PERK regulates gene expression Unfolded Protein Response (UPR) Deadenylation-dependent mRNA decay Butyrate Response Factor 1 (BRF1) destabilizes mRNA
Drugs
Diseases
GWAS
Protein-Protein Interactions		31 interactors: ABHD16A ACSS2 ATR CSNK2B DCP1A DCP2 DXO EIF3A EIF3B EIF4A3 EXOSC2 EXOSC4 GNPTG GSPT2 HIRA LSM8 NADSYN1 NDRG1 NDUFB10 PLEKHA5 PLEKHB2 POLR2A RHOXF2 RPRD2 SMG1 SMG5 STAU1 UPF2 UPF3A UPF3B XRN1	10 interactors: AGO1 AGO2 DCP1A DCP1B NAGK POLA2 PSMB1 TRIM21 UPF1 UPF2
Entrez ID		5976	167227
HPRD ID		03254	13125
Ensembl ID		ENSG00000005007	ENSG00000172795
Uniprot IDs		Q92900	Q8IU60
PDB IDs		2GJK 2GK6 2GK7 2IYK 2WJV 2WJY 2XZO 2XZP
Enriched GO Terms of Interacting Partners?		Nuclear-transcribed MRNA Catabolic Process MRNA Catabolic Process RNA Catabolic Process MRNA Metabolic Process Aromatic Compound Catabolic Process Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Cellular Macromolecule Catabolic Process RNA Localization Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Nuclear MRNA Surveillance Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic RNA Surveillance MRNA Transport RNA Transport Gene Expression Catabolic Process Nucleobase-containing Compound Metabolic Process RNA Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Histone MRNA Catabolic Process Cellular Nitrogen Compound Metabolic Process Nuclear Export Nucleocytoplasmic Transport Nuclear Transport Nitrogen Compound Metabolic Process MRNA Export From Nucleus RNA Export From Nucleus Histone MRNA Metabolic Process RNA Phosphodiester Bond Hydrolysis, Exonucleolytic Cellular Metabolic Process Cytoplasmic Transport Posttranscriptional Regulation Of Gene Expression Regulation Of Translation RRNA Metabolic Process Nucleic Acid Phosphodiester Bond Hydrolysis Ribonucleoprotein Complex Biogenesis Ribosome Biogenesis Intracellular MRNA Localization RRNA Catabolic Process Positive Regulation Of Translation MRNA Splicing, Via Spliceosome RNA Splicing, Via Transesterification Reactions Maturation Of 5.8S RRNA NcRNA Metabolic Process RNA 3'-end Processing RNA Phosphodiester Bond Hydrolysis Formation Of Translation Preinitiation Complex RRNA Processing	Nuclear-transcribed MRNA Catabolic Process MRNA Catabolic Process RNA Catabolic Process MRNA Metabolic Process Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay Cellular Macromolecule Catabolic Process Aromatic Compound Catabolic Process Catabolic Process Negative Regulation Of Translation Involved In Gene Silencing By MiRNA MiRNA Metabolic Process Posttranscriptional Regulation Of Gene Expression Exonucleolytic Nuclear-transcribed MRNA Catabolic Process Involved In Deadenylation-dependent Decay Nuclear-transcribed MRNA Catabolic Process, Exonucleolytic Regulation Of Gene Expression, Epigenetic Gene Silencing By MiRNA Gene Expression Cellular Nitrogen Compound Metabolic Process Posttranscriptional Gene Silencing Nucleocytoplasmic Transport Nuclear Transport Regulation Of Translation Nuclear-transcribed MRNA Catabolic Process, Deadenylation-dependent Decay Cellular Metabolic Process Negative Regulation Of Cellular Protein Metabolic Process Nitrogen Compound Metabolic Process Gene Silencing By RNA Negative Regulation Of Protein Metabolic Process MRNA Export From Nucleus RNA Export From Nucleus Negative Regulation Of Translation Nucleobase-containing Compound Metabolic Process Regulation Of Cellular Protein Metabolic Process RNA Metabolic Process Gene Silencing MRNA Cleavage Involved In Gene Silencing By MiRNA Deadenylation-independent Decapping Of Nuclear-transcribed MRNA N-acetylmannosamine Metabolic Process Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Regulation Of Protein Metabolic Process Nuclear Export MRNA Transport SiRNA Loading Onto RISC Involved In RNA Interference Negative Regulation Of Protein Deubiquitination Phosphatidylinositol-mediated Signaling RNA Transport Notch Signaling Pathway Positive Regulation Of Viral Entry Into Host Cell N-acetylneuraminate Catabolic Process RNA Localization
Tagcloud ?		aav9 adeno als amyotrophic cord decay empty exerts forelimb green helps implicate mycupf1 nmd nonsense otherwise paralysis quadriplegic recapitulate reproducible respective spinal tdp titrated transactive twofold upframeshift validate vector	accumulate actively bodies cleared constant decay depots ends engaged eukaryotes fate gradually intensively localizes machinery mammalian membranous mrnas ms2 regular relieved residing starvation stationary storage tagging tails translational visualization
Tagcloud (Difference) ?		aav9 adeno als amyotrophic cord empty exerts forelimb green helps implicate mycupf1 nmd nonsense otherwise paralysis quadriplegic recapitulate reproducible respective spinal tdp titrated transactive twofold upframeshift validate vector	accumulate actively bodies cleared constant depots ends engaged eukaryotes fate gradually intensively localizes machinery mammalian membranous mrnas ms2 regular relieved residing starvation stationary storage tagging tails translational visualization
Tagcloud (Intersection) ?		decay