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GAR1 and SMN2
Number of citations of the paper that reports this interaction (PubMedID
11509230
)
0
Data Source:
HPRD
(in vitro, in vivo)
GAR1
SMN2
Description
GAR1 ribonucleoprotein
survival of motor neuron 2, centromeric
Image
GO Annotations
Cellular Component
Chromosome, Telomeric Region
Fibrillar Center
Nucleus
Nucleoplasm
Telomerase Holoenzyme Complex
Nucleolus
Cajal Body
Box H/ACA SnoRNP Complex
Box H/ACA ScaRNP Complex
Box H/ACA Telomerase RNP Complex
Ribonucleoprotein Complex
Nucleus
Nucleoplasm
Cytoplasm
Cytosol
Cajal Body
Nuclear Body
Z Disc
Axon
SMN Complex
SMN-Sm Protein Complex
Cytoplasmic Ribonucleoprotein Granule
Cell Projection
Neuron Projection
Perikaryon
Gemini Of Cajal Bodies
Molecular Function
RNA Binding
Protein Binding
Box H/ACA SnoRNA Binding
Telomerase RNA Binding
RNA Binding
Protein Binding
Identical Protein Binding
Biological Process
SnoRNA Guided RRNA Pseudouridine Synthesis
Pseudouridine Synthesis
RRNA Processing
Telomere Maintenance Via Telomerase
Ribosome Biogenesis
Spliceosomal Complex Assembly
RNA Splicing, Via Transesterification Reactions
Spliceosomal SnRNP Assembly
DNA-templated Transcription Termination
MRNA Processing
Nervous System Development
RNA Splicing
Pathways
Telomere Extension By Telomerase
rRNA modification in the nucleus and cytosol
snRNP Assembly
SARS-CoV-2 modulates host translation machinery
Drugs
Nusinersen
Diseases
Spinal muscular atrophy (SMA), including: SMA type I (SMA1) / Werdning-Hoffman disease; SMA type II (SMA2); SMA type III (SMA3) / Kugeleberg-Welander disease; SMA type IV (SMA4); X-linked SMA 2 (SMAX2); X-linked distal SMA 3 (DSMAX); Distal SMA autosomal recessive type 4 (DSMA4); Congenital distal spinal muscular atrophy (SMAL); SMA proximal adult autosomal dominant (SMAPAD)
GWAS
Interacting Genes
7 interacting genes:
DSCR9
FOXP1
NEAT1
PCBP2
SMN1
SMN2
UBC
37 interacting genes:
BLOC1S6
BYSL
CHTOP
DDX20
DHX9
EHHADH
FAM9B
FBL
FNDC11
GAR1
GEMIN2
HNRNPUL1
IQUB
KRTAP19-6
KRTAP19-7
KRTAP21-2
KRTAP6-1
KRTAP6-2
MAGED1
MBD2
POLR1C
POLR2A
PPIG
SMN1
SNRPB
SNRPB2
SNRPD1
SNRPD2
SNRPD3
SNRPE
SNRPF
SNRPG
SNU13
SPANXN2
TIAL1
USP9X
VPS28
Entrez ID
54433
6607
HPRD ID
07569
09036
Ensembl ID
ENSG00000109534
ENSG00000205571
Uniprot IDs
Q9NY12
B4DP61
E7EQZ4
Q16637
PDB IDs
7BGB
7TRC
7V9A
8OUE
8OUF
1G5V
1MHN
2LEH
4A4E
4A4G
4GLI
4QQ6
5XJL
5XJQ
5XJR
5XJS
5XJT
5XJU
7W2P
7W30
Enriched GO Terms of Interacting Partners
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SMN Complex
Gemini Of Cajal Bodies
SMN-Sm Protein Complex
DNA-templated Transcription Termination
MRNA Metabolic Process
Spliceosomal SnRNP Assembly
Spliceosomal Complex Assembly
RNA Binding
Cajal Body
RNA Splicing
U6 2'-O-snRNA Methylation
Cytoplasmic Ribonucleoprotein Granule
MRNA Processing
Positive Regulation Of Interleukin-21 Production
Box C/D Sno(s)RNA 3'-end Processing
MiRNA Inhibitor Activity Via Base-pairing
RNA Metabolic Process
Perikaryon
Z Disc
Positive Regulation Of Hydrogen Peroxide-mediated Programmed Cell Death
Positive Regulation Of SnRNA Transcription By RNA Polymerase II
7SK SnRNP
RISC Complex Binding
Positive Regulation Of Synoviocyte Proliferation
LncRNA-mediated Post-transcriptional Gene Silencing
Nucleoplasm
Promoter-enhancer Loop Anchoring Activity
Regulation Of Macrophage Colony-stimulating Factor Production
SnRNA Modification
Positive Regulation Of MiRNA Catabolic Process
Viral RNA Genome Replication
Osteoclast Development
Regulation Of Endothelial Tube Morphogenesis
Protein-RNA Complex Assembly
Positive Regulation Of B Cell Receptor Signaling Pathway
RNA Splicing, Via Transesterification Reactions
Monocyte Activation
Endothelial Cell Activation
7SK SnRNA Binding
Positive Regulation Of Protein Localization To Cajal Body
Paraspeckles
Regulation Of MRNA Export From Nucleus
IRES-dependent Viral Translational Initiation
T Follicular Helper Cell Differentiation
Regulation Of Defense Response
RNA Processing
Nucleobase-containing Compound Biosynthetic Process
Negative Regulation Of Cell Growth Involved In Cardiac Muscle Cell Development
U6 SnRNA Binding
Negative Regulation Of B Cell Apoptotic Process
SMN-Sm Protein Complex
Spliceosomal SnRNP Assembly
7-methylguanosine Cap Hypermethylation
Spliceosomal Complex Assembly
U1 SnRNP
U4 SnRNP
Methylosome
Protein-RNA Complex Assembly
U2-type Prespliceosome Assembly
RNA Splicing, Via Transesterification Reactions
RNA Splicing
U2 SnRNP
U2-type Precatalytic Spliceosome
U2-type Spliceosomal Complex
U2-type Catalytic Step 2 Spliceosome
Small Nuclear Ribonucleoprotein Complex
U5 SnRNP
U4/U6 X U5 Tri-snRNP Complex
RNA Processing
U12-type Spliceosomal Complex
MRNA Processing
PICln-Sm Protein Complex
MRNA Splicing, Via Spliceosome
Ribonucleoprotein Complex
MRNA Metabolic Process
U7 SnRNP
Precatalytic Spliceosome
Spliceosomal Complex
RNA Methylation
RNA Metabolic Process
Catalytic Step 2 Spliceosome
RNA Binding
RNA Modification
Macromolecule Methylation
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Metabolic Process
Methylation
Nucleoplasm
Telomerase Holoenzyme Complex
Protein-containing Complex Assembly
Spliceosomal Tri-snRNP Complex
Cellular Component Assembly
Protein-containing Complex Organization
Cytosol
SMN Complex
Gemini Of Cajal Bodies
DNA-templated Transcription Termination
Telomerase RNA Binding
Intermediate Filament
Histone Pre-mRNA DCP Binding
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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