CHD4 and IKZF4

Number of citations of the paper that reports this interaction (PMID 12015313)
17

Data Source:
HPRD (in vivo)

		CHD4	IKZF4
Gene Name		chromodomain helicase DNA binding protein 4	IKAROS family zinc finger 4 (Eos)
Image
Gene Ontology Annotations	Cellular Component	Nuclear Chromatin Nucleus Nucleoplasm Cytoplasm Centrosome Membrane NuRD Complex Protein Complex	Nucleus
	Molecular Function	RNA Polymerase II Core Promoter Proximal Region Sequence-specific DNA Binding RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding RNA Polymerase II Repressing Transcription Factor Binding DNA Binding ATP-dependent DNA Helicase Activity Protein Binding ATP Binding Microtubule Binding Zinc Ion Binding Nucleosomal DNA Binding	Sequence-specific DNA Binding Transcription Factor Activity Protein Homodimerization Activity BHLH Transcription Factor Binding Sequence-specific DNA Binding Metal Ion Binding Protein Heterodimerization Activity
	Biological Process	Chromatin Organization Transcription, DNA-templated Regulation Of Transcription From RNA Polymerase II Promoter DNA Duplex Unwinding ATP-dependent Chromatin Remodeling Spindle Assembly	Transcription, DNA-templated Negative Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription From RNA Polymerase II Promoter
Pathways		Chromatin modifying enzymes Chromatin organization HDACs deacetylate histones RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription RNA Polymerase I Transcription RNA Polymerase I Transcription Initiation RNA Polymerase I Promoter Clearance
Drugs
Diseases
GWAS		Myopia (pathological) ( 23049088)	Alopecia areata ( 20596022) Asthma ( 21804548) Type 1 diabetes ( 18198356) Type 1 diabetes autoantibodies ( 21829393) Vitiligo ( 22561518)
Protein-Protein Interactions		17 interactors: ATM ATR CSNK2A1 EP300 HDAC1 HIST1H3A HIST3H3 IKZF4 MBD3L2 RBBP7 RNF8 RORC SMARCA4 SUMO1 TRIM27 TWIST1 XRN1	12 interactors: CHD4 FHL2 FOXP3 HDAC2 IKZF1 IKZF2 IKZF3 IKZF5 NFKBIA NRG1 SIN3A SIN3B
Entrez ID		1108	64375
HPRD ID		04472	05874
Ensembl ID		ENSG00000111642	ENSG00000123411
Uniprot IDs		B3KY63 F5GWX5 Q05CG6 Q14839	G5E9S4 Q9H2S9
PDB IDs		1MM2 1MM3 2EE1 2L5U 2L75	2MA7
Enriched GO Terms of Interacting Partners?		Nucleobase-containing Compound Metabolic Process Heterocycle Metabolic Process Negative Regulation Of Cellular Metabolic Process Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Negative Regulation Of Biosynthetic Process Nitrogen Compound Metabolic Process Negative Regulation Of Transcription, DNA-templated Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Gene Expression, Epigenetic Negative Regulation Of Gene Expression Cellular Response To Heat ATP-dependent Chromatin Remodeling Chromosome Organization Regulation Of Viral Transcription DNA Metabolic Process Chromatin Organization Regulation Of Gene Expression, Epigenetic Regulation Of Androgen Receptor Signaling Pathway Negative Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process Organelle Organization Regulation Of Binding RNA Metabolic Process Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of DNA Damage Response, Signal Transduction By P53 Class Mediator Response To Heat Regulation Of Cellular Response To Heat Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Gene Expression Rhythmic Process Cellular Metabolic Process Interaction With Symbiont Regulation Of Response To DNA Damage Stimulus Chromatin Modification Regulation Of RNA Metabolic Process Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Nucleosome Organization Regulation Of Viral Process Regulation Of Signal Transduction By P53 Class Mediator Histone Modification Transcription, DNA-templated Chromatin Remodeling Regulation Of Metabolic Process RNA Biosynthetic Process Response To Temperature Stimulus	Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process Transcription, DNA-templated RNA Biosynthetic Process Regulation Of Gene Expression Regulation Of Nitrogen Compound Metabolic Process RNA Metabolic Process Chromatin Modification Gene Expression Negative Regulation Of Transcription, DNA-templated Negative Regulation Of Nucleic Acid-templated Transcription Cellular Macromolecule Biosynthetic Process Negative Regulation Of RNA Biosynthetic Process Macromolecule Biosynthetic Process Chromatin Organization Negative Regulation Of Transcription From RNA Polymerase II Promoter Negative Regulation Of Gene Expression Positive Regulation Of Transcription, DNA-templated Regulation Of Metabolic Process Negative Regulation Of Biosynthetic Process Cardiac Muscle Tissue Development Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Histone Deacetylation Nucleobase-containing Compound Metabolic Process Protein Deacetylation Positive Regulation Of Cellular Biosynthetic Process Chromosome Organization Positive Regulation Of Transcription From RNA Polymerase II Promoter Heterocycle Metabolic Process Cellular Aromatic Compound Metabolic Process Biosynthetic Process Positive Regulation Of Cellular Metabolic Process Cellular Nitrogen Compound Metabolic Process Striated Muscle Tissue Development Muscle Tissue Development Regulation Of Immune System Process Cardiac Muscle Cell Differentiation Nitrogen Compound Metabolic Process Negative Regulation Of Cellular Metabolic Process Negative Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Cardiocyte Differentiation Regulation Of Apoptotic Process Regulation Of Cell Death Negative Regulation Of Histone Acetylation Negative Regulation Of Apoptotic Process Positive Regulation Of Metabolic Process
Tagcloud ?		1gamma aromatic caging calixarene calixarenes characterizing chromodomain disrupt finger fingers h3k9me0 h3k9me3 helicase heterochromatin homeodomain hosts hp1gamma macrocyclic nucleosome nurd phd phd2 powerful readers remodelling supramolecular tails trimethylated unmodified
Tagcloud (Difference) ?		1gamma aromatic caging calixarene calixarenes characterizing chromodomain disrupt finger fingers h3k9me0 h3k9me3 helicase heterochromatin homeodomain hosts hp1gamma macrocyclic nucleosome nurd phd phd2 powerful readers remodelling supramolecular tails trimethylated unmodified
Tagcloud (Intersection) ?