USP16 and UBD

Number of citations of the paper that reports this interaction (PMID 21090589)
3

Data Source:
BioGRID (unspecified method)

		USP16	UBD
Gene Name		ubiquitin specific peptidase 16	ubiquitin D
Image			No pdb structure
Gene Ontology Annotations	Cellular Component	Nucleus Cytoplasm	Nucleus Cytoplasm Aggresome
	Molecular Function	Transcription Coactivator Activity Cysteine-type Endopeptidase Activity Ubiquitin-specific Protease Activity Zinc Ion Binding Histone Binding Ubiquitin Binding	Protein Binding Proteasome Binding
	Biological Process	Transcription, DNA-templated Regulation Of Transcription From RNA Polymerase II Promoter Cellular Response To DNA Damage Stimulus Cell Cycle Mitotic Nuclear Division Histone Deubiquitination Monoubiquitinated Histone H2A Deubiquitination Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Translational Elongation Positive Regulation Of Transcription From RNA Polymerase II Promoter Protein Homotetramerization Cell Division Regulation Of Proteasomal Protein Catabolic Process Histone H2A K63-linked Deubiquitination	Proteolysis Ubiquitin-dependent Protein Catabolic Process Response To Organonitrogen Compound Protein Ubiquitination Protein Modification By Small Protein Conjugation Response To Interferon-gamma Response To Tumor Necrosis Factor Myeloid Dendritic Cell Differentiation Positive Regulation Of Apoptotic Process Positive Regulation Of I-kappaB Kinase/NF-kappaB Signaling Aggresome Assembly
Pathways
Drugs
Diseases
GWAS			Crohn's disease ( 22412388)
Protein-Protein Interactions		12 interactors: CALM1 CDK1 EXOSC10 FBXO11 HIST1H2AB HIST1H2BB HIST2H2AA3 HIST2H2AC HIST4H4 PTOV1 UBC UBD	9 interactors: LRRFIP2 MAD2L1 NUB1 SRPK1 SRPK2 TGFBR1 UBA6 UBE2Z USP16
Entrez ID		10600	10537
HPRD ID		06881	09354
Ensembl ID		ENSG00000156256	ENSG00000213886
Uniprot IDs		Q9Y5T5	O15205
PDB IDs		2I50
Enriched GO Terms of Interacting Partners?		Cellular Macromolecule Catabolic Process Epidermal Growth Factor Receptor Signaling Pathway Fibroblast Growth Factor Receptor Signaling Pathway ERBB Signaling Pathway Ubiquitin-dependent Protein Catabolic Process Modification-dependent Protein Catabolic Process DNA Packaging Cellular Response To Fibroblast Growth Factor Stimulus Response To Fibroblast Growth Factor Catabolic Process Proteolysis Involved In Cellular Protein Catabolic Process Cellular Protein Catabolic Process Neurotrophin TRK Receptor Signaling Pathway Neurotrophin Signaling Pathway Fc-epsilon Receptor Signaling Pathway Protein Catabolic Process Response To Amine Fc Receptor Signaling Pathway Positive Regulation Of Protein Serine/threonine Kinase Activity DNA Conformation Change Toll-like Receptor 5 Signaling Pathway Toll-like Receptor 10 Signaling Pathway Toll-like Receptor TLR6:TLR2 Signaling Pathway Toll-like Receptor TLR1:TLR2 Signaling Pathway Positive Regulation Of Ubiquitin-protein Ligase Activity Involved In Regulation Of Mitotic Cell Cycle Transition Toll-like Receptor 2 Signaling Pathway Toll-like Receptor 9 Signaling Pathway Glycogen Metabolic Process TRIF-dependent Toll-like Receptor Signaling Pathway Regulation Of Ubiquitin-protein Ligase Activity Involved In Mitotic Cell Cycle MyD88-independent Toll-like Receptor Signaling Pathway Innate Immune Response Toll-like Receptor 3 Signaling Pathway Pronuclear Fusion Nuclear Retention Of Unspliced Pre-mRNA At The Site Of Transcription MyD88-dependent Toll-like Receptor Signaling Pathway Anaphase-promoting Complex-dependent Proteasomal Ubiquitin-dependent Protein Catabolic Process Positive Regulation Of Ubiquitin-protein Transferase Activity Positive Regulation Of Ligase Activity Immune Response-regulating Cell Surface Receptor Signaling Pathway Toll-like Receptor 4 Signaling Pathway Polysaccharide Metabolic Process Positive Regulation Of Protein Ubiquitination Involved In Ubiquitin-dependent Protein Catabolic Process Regulation Of Ubiquitin-protein Transferase Activity Regulation Of Protein Ubiquitination Involved In Ubiquitin-dependent Protein Catabolic Process Mitotic DNA Damage Checkpoint Vascular Endothelial Growth Factor Receptor Signaling Pathway Mitotic DNA Integrity Checkpoint Toll-like Receptor Signaling Pathway Immune Response-regulating Signaling Pathway	Cellular Protein Metabolic Process Ubiquitin-dependent Protein Catabolic Process Cellular Protein Modification Process Modification-dependent Protein Catabolic Process Positive Regulation Of Viral Genome Replication Proteolysis Involved In Cellular Protein Catabolic Process Cellular Protein Catabolic Process Regulation Of Proteasomal Protein Catabolic Process Protein Catabolic Process Protein Metabolic Process Negative Regulation Of Viral Genome Replication Cellular Macromolecule Catabolic Process Regulation Of MRNA Splicing, Via Spliceosome Regulation Of Viral Genome Replication Positive Regulation Of Viral Process Regulation Of Protein Catabolic Process Negative Regulation Of Viral Process Nuclear Speck Organization Regulation Of MRNA Processing Regulation Of RNA Splicing Nucleus Organization Protein Ubiquitination Histone H2A K63-linked Deubiquitination Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Protein Modification By Small Protein Conjugation Monoubiquitinated Histone H2A Deubiquitination Negative Regulation Of APC-Cdc20 Complex Activity Regulation Of Viral Process Regulation Of Proteolysis Proteolysis Positive Regulation Of Mitotic Cell Cycle Spindle Assembly Checkpoint Positive Regulation Of Spindle Checkpoint Regulation Of Protein Ubiquitination Innate Immune Response Catabolic Process Parathyroid Gland Development Positive Regulation Of Translational Elongation Monoubiquitinated Protein Deubiquitination Chromosome Segregation Sperm Chromatin Condensation Positive Regulation Of Cell Cycle Checkpoint Proteasome-mediated Ubiquitin-dependent Protein Catabolic Process Proteasomal Protein Catabolic Process Regulation Of Cellular Protein Metabolic Process Regulation Of Cell Cycle Endothelial Cell Activation Response To Stress Positive Regulation Of Cell Cycle Pathway-restricted SMAD Protein Phosphorylation Chromosome Organization
Tagcloud ?		critically defective deubiquitinase deubiquitinates deubiquitination enter example h2a h2b hela hox identifies laevis ligase mitosis mitotic modifications notably nucleosomal owing posterior predominately prefers prerequisite segregation slow ubiquitination ubp xenopus	abolish chains conjugating cue cue1p differentially endoplasmic erad facilitates far growing hence imply integrates k48 ligase ligases mono pivotal polyubiquitin recognize stabilizing turnover ubc7p ubds ubiquitin ubiquitylation unexpected
Tagcloud (Difference) ?		critically defective deubiquitinase deubiquitinates deubiquitination enter example h2a h2b hela hox identifies laevis mitosis mitotic modifications notably nucleosomal owing posterior predominately prefers prerequisite segregation slow ubiquitination ubp xenopus	abolish chains conjugating cue cue1p differentially endoplasmic erad facilitates far growing hence imply integrates k48 ligases mono pivotal polyubiquitin recognize stabilizing turnover ubc7p ubds ubiquitin ubiquitylation unexpected
Tagcloud (Intersection) ?		ligase