SMARCE1 and GOLGA6L9

Number of citations of the paper that reports this interaction (PubMedID 32296183)
50

Data Source:
BioGRID (two hybrid)

		SMARCE1	GOLGA6L9
Description		SWI/SNF related BAF chromatin remodeling complex subunit E1	golgin A6 family like 9
Image			No pdb structure
GO Annotations	Cellular Component	Nuclear Chromosome Kinetochore Chromatin Nucleus Nucleoplasm Nuclear Matrix SWI/SNF Complex RSC-type Complex Protein-containing Complex Brahma Complex NpBAF Complex NBAF Complex BBAF Complex
	Molecular Function	DNA Binding Chromatin Binding Transcription Coactivator Activity RNA Binding Protein Binding N-acetyltransferase Activity Nuclear Receptor Binding Nucleosomal DNA Binding	Protein Binding
	Biological Process	Chromatin Organization Nucleosome Disassembly Chromatin Remodeling Regulation Of Transcription By RNA Polymerase II Nervous System Development Neurogenesis Regulation Of Mitotic Metaphase/anaphase Transition Positive Regulation Of T Cell Differentiation Positive Regulation Of Cell Differentiation Positive Regulation Of Myoblast Differentiation Negative Regulation Of DNA-templated Transcription Positive Regulation Of DNA-templated Transcription Regulation Of G0 To G1 Transition Positive Regulation Of Stem Cell Population Maintenance Regulation Of G1/S Transition Of Mitotic Cell Cycle Positive Regulation Of Double-strand Break Repair Regulation Of Nucleotide-excision Repair
Pathways		RMTs methylate histone arginines RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known Regulation of MITF-M-dependent genes involved in pigmentation Regulation of MITF-M-dependent genes involved in pigmentation Regulation of endogenous retroelements by Piwi-interacting RNAs (piRNAs) Formation of the canonical BAF (cBAF) complex Formation of the polybromo-BAF (pBAF) complex Formation of the embryonic stem cell BAF (esBAF) complex Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF) Formation of neuronal progenitor and neuronal BAF (npBAF and nBAF)
Drugs		Phenethyl Isothiocyanate
Diseases
GWAS		Allergic disease (asthma, hay fever and/or eczema) (age of onset) ( 32603359) Allergic disease (asthma, hay fever and/or eczema) (multivariate analysis) ( 32603359) Allergic disease (asthma, hay fever or eczema) ( 29083406 29785011) Allergic rhinitis ( 31361310) Asthma ( 30929738 31619474 31959851) Asthma (childhood onset) ( 30929738) Asthma or allergic disease (pleiotropy) ( 29785011) Eczema ( 31361310) Triglyceride levels in HIV infection ( 33109212)	Tourette syndrome ( 30818990)
Interacting Genes		94 interacting genes: AMOTL2 AR ARID2 BAZ1B BRAP BRMS1 CCDC136 CCDC172 CCDC183 CCHCR1 CDR2 CEBPA CEP170P1 CEP63 CEP70 CYSRT1 DISC1 EPS8 ERG ESR1 ESR2 EXOC4 EXOC7 FAM217B FSD2 GATA1 GOLGA2 GOLGA6L9 GRIPAP1 HUNK IFT74 IFT88 ING5 ITCH JAKMIP2 KIFC3 KLF1 KRT14 KRT15 KRT16 KRT19 KRT27 KRT31 KRT34 KRT35 KRT37 KRT39 KRT40 KRTAP1-1 KRTAP10-8 KRTAP10-9 KRTAP6-3 MDM2 MED4 MEOX2 MIPOL1 MRFAP1L1 MTUS2 NBPF22P NCOA1 NCOA2 NCOA3 NOTCH2NLA NR0B2 NR3C1 NUP62 OGT OIP5 PGR PSMC6 RALBP1 RARB RCOR1 RELB RINT1 RSPH1 SIN3A SIN3B SMAD1 SMARCA4 SPAG5 SRC STX11 SYCE1 TEX12 TFE3 TFIP11 TIAM1 TNIK TRIM54 TRIP10 TXLNA USHBP1 VPS52	215 interacting genes: AIRIM ANKRD11 ARHGAP9 ASXL1 ATP6V1G1 ATPAF2 ATXN7L2 AVPI1 BAG6 BAHD1 BANP BCL6B BHLHA9 BYSL C1orf35 C22orf15 C3 CABP2 CATIP CAVIN3 CBX8 CCDC116 CCDC120 CCDC146 CCDC185 CCDC187 CCHCR1 CDC37 CDC73 CDK18 CEP72 CEP95 CNNM3 CWF19L2 DAXX DEF6 DENND5A DES DOCK2 DPF2 DUSP26 EAF1 EIF3D ENKD1 FAAP20 FAM107A FAM110A FAM161A FAM161B FBXO28 FEM1A FLYWCH1 FXN GADD45GIP1 GAS2L2 GEM GLIS2 GPANK1 GTF2B HAPLN2 HBZ HDAC4 HDAC7 HGS HOXB5 HOXB9 HOXC8 IL16 INO80B ISCU JMY JRK KANK2 KCTD9 KLHL35 KRT1 KRT75 LAGE3 LENG1 LGALS4 LMO3 LMO4 LYSMD1 M1AP MAB21L2 MBD3 MBD3L2 MFAP1 MOS MRPL11 MYOZ3 NAB2 NDUFAF3 NSMF NTAQ1 NXF1 NXT2 ORC1 PATZ1 PCDHB14 PHF1 PIN1 PKN1 PNMA5 POLL POLR1C POU6F2 PPP1R18 PRKAB2 PRPF18 PRPF31 PWWP2B RANBP3L RASSF10 RIN1 RLN1 RNF39 RNPS1 RTP5 SCAND1 SCNM1 SH2D4A SHC3 SLIRP SLX9 SMARCD1 SMARCE1 SNAI1 SSX5 STAMBPL1 STK25 SUOX SUV39H1 SUV39H2 TACO1 TBC1D30 TCEANC TEAD4 THAP7 TJAP1 TLE5 TLX3 TMSB4X TPRX1 TRAF3IP3 TRAF4 TRIM14 TSEN54 TSFM TSGA10IP TSPYL4 TTC23 TXN2 TYK2 UBASH3A UBL4B UBTFL1 USHBP1 USP2 VEZF1 WDR25 ZBTB16 ZBTB24 ZFHX3 ZFP1 ZGPAT ZKSCAN3 ZMAT2 ZNF124 ZNF155 ZNF165 ZNF17 ZNF20 ZNF205 ZNF230 ZNF250 ZNF264 ZNF32 ZNF329 ZNF35 ZNF410 ZNF414 ZNF417 ZNF438 ZNF444 ZNF446 ZNF479 ZNF48 ZNF490 ZNF497 ZNF524 ZNF552 ZNF557 ZNF574 ZNF578 ZNF580 ZNF581 ZNF587 ZNF599 ZNF624 ZNF628 ZNF629 ZNF648 ZNF669 ZNF696 ZNF764 ZNF785 ZNF792 ZNF80 ZNF835 ZNF837 ZNF844 ZNHIT1 ZSCAN23 ZSCAN26
Entrez ID		6605	440295
HPRD ID		04382
Ensembl ID		ENSG00000073584	ENSG00000197978
Uniprot IDs		Q969G3	A6NEM1
PDB IDs		6LTH 6LTJ 7CYU 7VDV 7Y8R
Enriched GO Terms of Interacting Partners?		Keratin Filament Intermediate Filament Structural Constituent Of Skin Epidermis Intermediate Filament Organization Intermediate Filament Cytoskeleton Organization Intermediate Filament-based Process Nuclear Receptor-mediated Signaling Pathway Morphogenesis Of An Epithelium Cytoskeleton Tissue Morphogenesis Estrogen Response Element Binding Chromatin Structural Molecule Activity Protein Binding Intracellular Receptor Signaling Pathway Cytoskeleton Organization Organelle Organization Hormone-mediated Signaling Pathway Steroid Hormone Receptor Signaling Pathway Nuclear Receptor-mediated Steroid Hormone Signaling Pathway Chromatin Binding Steroid Binding Nuclear Receptor Activity Supramolecular Fiber Organization Positive Regulation Of Transcription By RNA Polymerase II Regulation Of Transcription By RNA Polymerase II Epithelial Cell Differentiation Positive Regulation Of RNA Biosynthetic Process Positive Regulation Of DNA-templated Transcription Intracellular Signal Transduction Anatomical Structure Morphogenesis Cellular Developmental Process Positive Regulation Of Nucleobase-containing Compound Metabolic Process Nuclear Steroid Receptor Activity Sin3-type Complex Estrogen Receptor Signaling Pathway Positive Regulation Of Stem Cell Population Maintenance Cytosol Positive Regulation Of RNA Metabolic Process Epidermis Development Cell Differentiation DNA-binding Transcription Factor Activity Protein-containing Complex Cellular Response To Hormone Stimulus Negative Regulation Of Transcription By RNA Polymerase II Nucleoplasm Developmental Process Transcription Repressor Complex Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process	Regulation Of Transcription By RNA Polymerase II Regulation Of DNA-templated Transcription Regulation Of RNA Biosynthetic Process Zinc Ion Binding Regulation Of RNA Metabolic Process Nucleus DNA Binding Protein Binding Regulation Of Nucleobase-containing Compound Metabolic Process Regulation Of Gene Expression Regulation Of Macromolecule Biosynthetic Process DNA-binding Transcription Factor Activity, RNA Polymerase II-specific Regulation Of Primary Metabolic Process RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding Regulation Of Macromolecule Metabolic Process Metal Ion Binding Regulation Of Metabolic Process RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding DNA-binding Transcription Factor Activity Negative Regulation Of DNA-templated Transcription Negative Regulation Of RNA Metabolic Process Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Transcription By RNA Polymerase II Chromatin Organization Negative Regulation Of Nucleobase-containing Compound Metabolic Process Sequence-specific Double-stranded DNA Binding Nucleoplasm Nuclear Speck
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