LINC01554 and OXCT1

Number of citations of the paper that reports this interaction (PubMedID 30809309)
42

Data Source:
BioGRID (unspecified method)

		LINC01554	OXCT1
Description		long intergenic non-protein coding RNA 1554	3-oxoacid CoA-transferase 1
Image		No pdb structure
GO Annotations	Cellular Component		Mitochondrion Mitochondrial Matrix
	Molecular Function		Succinyl-CoA:3-oxo-acid CoA-transferase Activity CoA-transferase Activity Transferase Activity Identical Protein Binding
	Biological Process		Lipid Metabolic Process Heart Development Response To Nutrient Response To Xenobiotic Stimulus Response To Hormone Response To Activity Positive Regulation Of Insulin Secretion Involved In Cellular Response To Glucose Stimulus Ketone Catabolic Process Response To Starvation Response To Ethanol Ketone Body Catabolic Process Adipose Tissue Development Ketone Body Metabolic Process
Pathways			Utilization of Ketone Bodies Mitochondrial protein degradation
Drugs			Ethylmercurithiosalicylic acid
Diseases
GWAS		LDL cholesterol levels in HIV infection ( 33109212)	Ketonuria ( 30476138) Ketonuria (mild) ( 30476138) Ketonuria (moderate to severe) ( 30476138)
Interacting Genes		141 interacting genes: AARS1 ACADVL ACIN1 ACTB ACTG1 ACTN1 ACTN3 ACTR3 ALDOA ANXA2 ANXA5 ANXA6 APEX1 ARHGAP1 ASS1 ATAD3A ATIC ATP5F1A BZW2 CANX CCT2 CCT3 CCT4 CCT6A CCT7 CKAP4 CS CTPS1 DDX3X DDX46 DHX9 DNAH2 DNAJA1 DST DYNC1H1 EDARADD EEF1G EEF2 EIF3A EIF3E EIF4A2 EIF4B ENO1 ENO3 EPRS1 ERO1A G3BP1 G6PD GANAB GAPDH GARS1 GDI2 GPI GTF2I HIVEP2 HMCN1 HNRNPF HSP90AA1 HSP90B1 HSPA1L HSPA5 HSPA8 HSPA9 HSPD1 HYOU1 IDH1 IPO4 IPO7 IPO9 ITPR2 KARS1 KPNA1 KPNB1 KRT18 KRT7 KRT8 KRT8P3 LRPPRC MCM7 MSN MYO18A NAP1L1 NAP1L4 NCBP1 NCL NPM1 OLA1 OXCT1 PABPC1 PCBP2 PDIA3 PDIA6 PFAS PGD PGK1 PGM1 PHGDH PKM PLOD2 PMPCA POR PPP2R1A PSMC1 PSMD2 PSMD7 PTBP1 RDX RPL6 RPSA RTCB RTN4 SARS1 SEPTIN7 SEPTIN9 SERPINH1 SFPQ SQSTM1 TARS1 TGFBI THOP1 TKT TTF2 TUBA1A TUBA8 TUBB TUBB2A TUBB3 TUBB4A TUBB4B TUBB6 TUFM TXNRD1 TYMP UBA1 VCL VCP VIM VPS35 WARS1 XPO1 XRCC5	3 interacting genes: LINC01554 OGT PSEN1
Entrez ID		202299	5019
HPRD ID		16896	02001
Ensembl ID		ENSG00000236882	ENSG00000083720
Uniprot IDs			A0A024R040 E9PDW2 P55809
PDB IDs			3DLX
Enriched GO Terms of Interacting Partners?		Extracellular Exosome RNA Binding Nucleotide Binding Cytosol Cytoplasm Unfolded Protein Binding ATP-dependent Protein Folding Chaperone ATP Hydrolysis Activity ATP Binding Focal Adhesion Protein Folding Secretory Granule Lumen Cadherin Binding Ficolin-1-rich Granule Lumen Protein Folding Chaperone Structural Constituent Of Cytoskeleton Nucleotide Metabolic Process Nicotinamide Nucleotide Metabolic Process Microtubule Ubiquitin Protein Ligase Binding Nucleobase-containing Compound Metabolic Process Ligase Activity Melanosome Purine Nucleotide Metabolic Process Nucleoside Phosphate Metabolic Process Protein Refolding Nucleobase-containing Small Molecule Metabolic Process Glycolytic Process Positive Regulation Of Telomerase RNA Localization To Cajal Body Ribose Phosphate Metabolic Process ADP Catabolic Process Positive Regulation Of Protein Localization To Cajal Body Chaperonin-containing T-complex ATP Metabolic Process Purine Ribonucleoside Diphosphate Catabolic Process Ribonucleoprotein Complex Ribonucleoside Diphosphate Catabolic Process ADP Metabolic Process Nucleotide Catabolic Process Nucleoside Diphosphate Catabolic Process TRNA Aminoacylation For Protein Translation Aminoacyl-tRNA Ligase Activity Ribonucleotide Metabolic Process Microtubule Cytoskeleton Protein Folding In Endoplasmic Reticulum Regulation Of Telomerase RNA Localization To Cajal Body Positive Regulation Of Telomere Maintenance Via Telomerase Nucleobase-containing Compound Catabolic Process Translation TRNA Aminoacylation	Regulation Of ATP Metabolic Process Negative Regulation Of Proteolysis Involved In Protein Catabolic Process Regulation Of Carbohydrate Catabolic Process Regulation Of Glycolytic Process Regulation Of Purine Nucleotide Metabolic Process Negative Regulation Of Ubiquitin-dependent Protein Catabolic Process Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Protein Glycosylation Negative Regulation Of Proteolysis Negative Regulation Of Core Promoter Binding Macromolecule Glycosylation Regulation Of Generation Of Precursor Metabolites And Energy Protein N-acetylglucosaminyltransferase Complex Negative Regulation Of Non-canonical Inflammasome Complex Assembly Glycosylation Smooth Endoplasmic Reticulum Calcium Ion Homeostasis Regulation Of Ubiquitin-dependent Protein Catabolic Process Cajal-Retzius Cell Differentiation Protein Processing Positive Regulation Of Proteolysis Regulation Of Proteasomal Protein Catabolic Process Protein Catabolic Process At Postsynapse Negative Regulation Of Transcription Regulatory Region DNA Binding Protein O-acetylglucosaminyltransferase Activity Positive Regulation Of L-glutamate Import Across Plasma Membrane Synaptic Vesicle Targeting Astrocyte Activation Involved In Immune Response Sequestering Of Calcium Ion Regulation Of Synapse Organization Protein Maturation Positive Regulation Of Amyloid Fibril Formation Autophagy Aspartic Endopeptidase Activity, Intramembrane Cleaving Growth Factor Receptor Binding Positive Regulation Of Transcription From RNA Polymerase II Promoter By Glucose Non-canonical Inflammasome Complex Assembly Positive Regulation Of Transcription By Glucose Regulation Of Transcription From RNA Polymerase II Promoter By Glucose Regulation Of Small Molecule Metabolic Process Gamma-secretase Complex Carbon Catabolite Regulation Of Transcription Regulation Of L-glutamate Import Across Plasma Membrane Regulation Of Proteolysis Choline Transport Ciliary Rootlet Regulation Of Protein Catabolic Process Negative Regulation Of Catabolic Process Notch Receptor Processing Regulation Of Transcription By Glucose Amyloid-beta Formation
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