LINC00624 and HRNR

Number of citations of the paper that reports this interaction (PubMedID 36252997)
50

Data Source:
BioGRID (unspecified method)

		LINC00624	HRNR
Description		long intergenic non-protein coding RNA 624	hornerin
Image		No pdb structure	No pdb structure
GO Annotations	Cellular Component		Cornified Envelope Extracellular Region Nucleus Cytoplasm Extracellular Matrix Azurophil Granule Lumen Keratohyalin Granule Perinuclear Region Of Cytoplasm Extracellular Exosome
	Molecular Function		Calcium Ion Binding Metal Ion Binding Transition Metal Ion Binding
	Biological Process		Keratinization Cell Envelope Organization Establishment Of Skin Barrier
Pathways			Neutrophil degranulation
Drugs			Zinc Zinc acetate
Diseases
GWAS		Body mass index and systolic blood pressure (bivariate analysis) ( 33539483) End-stage kidney disease ( 31178898) Heel bone mineral density x serum urate levels interaction ( 34046847) Height ( 31562340) Systolic blood pressure and diastolic blood pressure (bivariate analysis) ( 33539483) Waist circumference adjusted for body mass index ( 28552196)	Allergic disease (asthma, hay fever and/or eczema) (age of onset) ( 32603359) Allergic disease (asthma, hay fever and/or eczema) (multivariate analysis) ( 32603359) Allergic disease (asthma, hay fever or eczema) ( 29083406 29785011) Asthma ( 30929738 31619474 31959851) Asthma (age of onset) ( 31036433) Asthma (childhood onset) ( 30929738 31036433) Asthma onset (childhood vs adult) ( 30929738) Asthma or allergic disease (pleiotropy) ( 29785011) Itch intensity from mosquito bite ( 28199695) Male-pattern baldness ( 28196072)
Interacting Genes		38 interacting genes: ACTA1 ACTC1 ADAR ALB CCT2 CCT4 CPNE3 DDX42 DDX5 EIF2AK2 FUBP3 G6PD H2BC18 HDAC6 HNRNPL HNRNPM HNRNPU HRNR ILF3 MCCC1 MCCC2 NONO PARP1 PTBP1 PTBP2 PTBP3 SERBP1 SFPQ SND1 SRRT STAU1 STAU2 TRIM28 TUBA1B TUBA1C UBAP2L YBX3 ZNF354C	5 interacting genes: HSP90AA1 LINC00624 RNF26 UBC USP7
Entrez ID		100289211	388697
HPRD ID			17114
Ensembl ID		ENSG00000278811	ENSG00000197915
Uniprot IDs			Q86YZ3
PDB IDs
Enriched GO Terms of Interacting Partners?		RNA Binding RNA Localization Nucleic Acid Binding Double-stranded RNA Binding MRNA Processing MRNA Binding Negative Regulation Of Macromolecule Biosynthetic Process MRNA Metabolic Process Negative Regulation Of Biosynthetic Process Regulation Of Viral Genome Replication Negative Regulation Of Metabolic Process Dendritic Transport Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of Gene Expression RNA Splicing Regulation Of Viral Life Cycle RNA Processing Cytoskeleton-dependent Intracellular Transport Alternative MRNA Splicing, Via Spliceosome Regulation Of Viral Process RNA Metabolic Process Cell Body Nucleus Axo-dendritic Transport Paraspeckles Regulation Of Macromolecule Biosynthetic Process Intracellular MRNA Localization Extracellular Exosome Regulation Of RNA Splicing Methylcrotonoyl-CoA Carboxylase Complex Methylcrotonoyl-CoA Carboxylase Activity Regulation Of Telomere Maintenance Via Telomere Lengthening Pre-mRNA Binding Cytoplasm Nucleobase-containing Compound Metabolic Process Nucleic Acid Metabolic Process Dendritic Transport Of Messenger Ribonucleoprotein Complex Anterograde Dendritic Transport Of Messenger Ribonucleoprotein Complex Regulation Of Alternative MRNA Splicing, Via Spliceosome Regulation Of Macromolecule Metabolic Process Regulation Of Gene Expression Regulation Of Metabolic Process Cellular Response To Chemical Stress Negative Regulation Of RNA Splicing Negative Regulation Of RNA Metabolic Process Regulatory NcRNA-mediated Gene Silencing Transport Along Microtubule Binding Of Sperm To Zona Pellucida Mesenchyme Migration ScaRNA Localization To Cajal Body	Regulation Of Defense Response To Virus CTP Binding DATP Binding Regulation Of Type I Interferon Production Neurofibrillary Tangle Assembly UTP Binding Regulation Of Telomere Maintenance Sulfonylurea Receptor Binding Protein Ubiquitination Protein Modification By Small Protein Conjugation Rho GDP-dissociation Inhibitor Binding Symbiont-mediated Disruption Of Host Cell PML Body Post-translational Protein Modification Chaperone-mediated Autophagy Macromolecule Catabolic Process Sperm Mitochondrial Sheath Nitric-oxide Synthase Regulator Activity Protein Stabilization Regulation Of Intracellular Transport Dendritic Growth Cone Sperm Plasma Membrane TPR Domain Binding Regulation Of Chromosome Organization Telomerase Holoenzyme Complex Assembly Regulation Of Establishment Of Protein Localization To Chromosome Regulation Of Establishment Of Protein Localization To Telomere Regulation Of Retrograde Transport, Endosome To Golgi Protein Localization To Perinuclear Region Of Cytoplasm Positive Regulation Of Cardiac Muscle Contraction Inclusion Body Assembly Monoubiquitinated Protein Deubiquitination Ubiquitin Protein Ligase Binding Proteolysis DNA Alkylation Repair Positive Regulation Of Cell Size Protein Unfolding Transcription-coupled Nucleotide-excision Repair Protein Metabolic Process Cardiac Muscle Cell Apoptotic Process Positive Regulation Of Striated Muscle Contraction Striated Muscle Cell Apoptotic Process Regulation Of Telomere Capping Regulation Of Protein Catabolic Process Regulation Of Protein Stability Protein Tag Activity Negative Regulation Of Gene Expression Via Chromosomal CpG Island Methylation Enzyme-substrate Adaptor Activity Negative Regulation Of Defense Response To Virus Endocytic Vesicle Lumen Response To Salt Stress
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?