LINC00624 and CPNE3

Number of citations of the paper that reports this interaction (PubMedID 36252997)
50

Data Source:
BioGRID (unspecified method)

		LINC00624	CPNE3
Description		long intergenic non-protein coding RNA 624	copine 3
Image		No pdb structure	No pdb structure
GO Annotations	Cellular Component		Nucleus Nucleoplasm Nucleolus Cytoplasm Mitochondrion Cytosol Plasma Membrane Focal Adhesion Membrane Cell Junction Azurophil Granule Membrane Extracellular Exosome Anchoring Junction
	Molecular Function		RNA Binding Protein Serine/threonine Kinase Activity Protein Binding Calcium-dependent Phospholipid Binding Receptor Tyrosine Kinase Binding Metal Ion Binding Calcium-dependent Protein Binding
	Biological Process		Positive Regulation Of Cell Migration ERBB2 Signaling Pathway Cellular Response To Calcium Ion Cellular Response To Growth Factor Stimulus
Pathways			Glycerophospholipid biosynthesis Neutrophil degranulation
Drugs
Diseases
GWAS		Body mass index and systolic blood pressure (bivariate analysis) ( 33539483) End-stage kidney disease ( 31178898) Heel bone mineral density x serum urate levels interaction ( 34046847) Height ( 31562340) Systolic blood pressure and diastolic blood pressure (bivariate analysis) ( 33539483) Waist circumference adjusted for body mass index ( 28552196)	Intelligence (MTAG) ( 29326435)
Interacting Genes		38 interacting genes: ACTA1 ACTC1 ADAR ALB CCT2 CCT4 CPNE3 DDX42 DDX5 EIF2AK2 FUBP3 G6PD H2BC18 HDAC6 HNRNPL HNRNPM HNRNPU HRNR ILF3 MCCC1 MCCC2 NONO PARP1 PTBP1 PTBP2 PTBP3 SERBP1 SFPQ SND1 SRRT STAU1 STAU2 TRIM28 TUBA1B TUBA1C UBAP2L YBX3 ZNF354C	8 interacting genes: LINC00624 POT1 QARS1 RHOU SNCA TERF1 TERF2IP TINF2
Entrez ID		100289211	8895
HPRD ID			05016
Ensembl ID		ENSG00000278811	ENSG00000085719
Uniprot IDs			O75131
PDB IDs
Enriched GO Terms of Interacting Partners?		RNA Binding RNA Localization Nucleic Acid Binding Double-stranded RNA Binding MRNA Processing MRNA Binding Negative Regulation Of Macromolecule Biosynthetic Process MRNA Metabolic Process Negative Regulation Of Biosynthetic Process Regulation Of Viral Genome Replication Negative Regulation Of Metabolic Process Dendritic Transport Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of Gene Expression RNA Splicing Regulation Of Viral Life Cycle RNA Processing Cytoskeleton-dependent Intracellular Transport Alternative MRNA Splicing, Via Spliceosome Regulation Of Viral Process RNA Metabolic Process Cell Body Nucleus Axo-dendritic Transport Paraspeckles Regulation Of Macromolecule Biosynthetic Process Intracellular MRNA Localization Extracellular Exosome Regulation Of RNA Splicing Methylcrotonoyl-CoA Carboxylase Complex Methylcrotonoyl-CoA Carboxylase Activity Regulation Of Telomere Maintenance Via Telomere Lengthening Pre-mRNA Binding Cytoplasm Nucleobase-containing Compound Metabolic Process Nucleic Acid Metabolic Process Dendritic Transport Of Messenger Ribonucleoprotein Complex Anterograde Dendritic Transport Of Messenger Ribonucleoprotein Complex Regulation Of Alternative MRNA Splicing, Via Spliceosome Regulation Of Macromolecule Metabolic Process Regulation Of Gene Expression Regulation Of Metabolic Process Cellular Response To Chemical Stress Negative Regulation Of RNA Splicing Negative Regulation Of RNA Metabolic Process Regulatory NcRNA-mediated Gene Silencing Transport Along Microtubule Binding Of Sperm To Zona Pellucida Mesenchyme Migration ScaRNA Localization To Cajal Body	Shelterin Complex Nuclear Telomere Cap Complex Telomere Capping Telomeric DNA Binding Negative Regulation Of Telomere Maintenance G-rich Strand Telomeric DNA Binding Positive Regulation Of Telomere Maintenance Negative Regulation Of Chromosome Organization Telomere Maintenance Negative Regulation Of Telomere Maintenance Via Telomerase Positive Regulation Of Chromosome Organization Telomere Maintenance Via Telomerase Regulation Of Telomere Maintenance RNA-templated DNA Biosynthetic Process Telomere Organization Negative Regulation Of DNA Metabolic Process Telomere Maintenance Via Telomere Lengthening Negative Regulation Of DNA Biosynthetic Process Negative Regulation Of Telomere Maintenance Via Telomere Lengthening Chromosome, Telomeric Region Regulation Of Telomere Maintenance Via Telomerase Positive Regulation Of Organelle Organization Telomere Assembly Regulation Of Telomere Maintenance Via Telomere Lengthening Positive Regulation Of Cellular Component Organization Regulation Of Chromosome Organization Positive Regulation Of DNA Metabolic Process Negative Regulation Of Cellular Component Organization Regulation Of DNA Biosynthetic Process Telomeric D-loop Disassembly DNA Biosynthetic Process Chromosome Organization Telomeric Loop Disassembly Protein Localization To Chromosome, Telomeric Region Negative Regulation Of Nucleobase-containing Compound Metabolic Process Regulation Of DNA Metabolic Process Regulation Of Organelle Organization Chromosome Protein Kinase Inhibitor Activity Regulation Of Cellular Component Organization DNA Metabolic Process Organelle Organization Negative Regulation Of Macromolecule Metabolic Process Negative Regulation Of Metabolic Process Response To Desipramine Negative Regulation Of Norepinephrine Uptake Phospholipase D Inhibitor Activity Positive Regulation Of SNARE Complex Assembly Negative Regulation Of Dopamine Uptake Involved In Synaptic Transmission Negative Regulation Of Establishment Of Protein Localization To Telomere
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