FYCO1 and RAF1

Number of citations of the paper that reports this interaction (PubMedID 16364241)
0

Data Source:
BioGRID (two hybrid)

		FYCO1	RAF1
Description		FYVE and coiled-coil domain autophagy adaptor 1	Raf-1 proto-oncogene, serine/threonine kinase
Image
GO Annotations	Cellular Component	Lysosome Endosome Late Endosome Autophagosome Golgi Apparatus Membrane Cytoplasmic Vesicle	Nucleus Cytoplasm Mitochondrion Mitochondrial Outer Membrane Golgi Apparatus Cytosol Plasma Membrane Membrane Pseudopodium
	Molecular Function	Protein Binding Zinc Ion Binding Metal Ion Binding	Nucleotide Binding Protein Kinase Activity Protein Serine/threonine Kinase Activity MAP Kinase Kinase Kinase Activity Protein Binding ATP Binding Zinc Ion Binding Adenylate Cyclase Activator Activity Kinase Activity Transferase Activity Enzyme Binding Small GTPase Binding Identical Protein Binding Metal Ion Binding Protein Serine Kinase Activity
	Biological Process	Plus-end-directed Vesicle Transport Along Microtubule Positive Regulation Of Autophagosome Maturation	MAPK Cascade Intracellular Glucose Homeostasis Protein Phosphorylation Apoptotic Process Signal Transduction Negative Regulation Of Cell Population Proliferation Insulin Receptor Signaling Pathway Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors Schwann Cell Development Cell Differentiation Thyroid Gland Development Negative Regulation Of Protein-containing Complex Assembly Positive Regulation Of Peptidyl-serine Phosphorylation Somatic Stem Cell Population Maintenance Regulation Of Rho Protein Signal Transduction Insulin Secretion Involved In Cellular Response To Glucose Stimulus Response To Muscle Stretch ERBB2-ERBB3 Signaling Pathway Wound Healing Myelination Regulation Of Apoptotic Process Negative Regulation Of Apoptotic Process Positive Regulation Of MAPK Cascade Type B Pancreatic Cell Proliferation Intermediate Filament Cytoskeleton Organization Regulation Of Cell Differentiation Positive Regulation Of Transcription By RNA Polymerase II Insulin-like Growth Factor Receptor Signaling Pathway Neurotrophin TRK Receptor Signaling Pathway Thymus Development Face Development Type II Interferon-mediated Signaling Pathway Death-inducing Signaling Complex Assembly Negative Regulation Of Extrinsic Apoptotic Signaling Pathway Via Death Domain Receptors
Pathways			Stimuli-sensing channels Rap1 signalling GP1b-IX-V activation signalling CD209 (DC-SIGN) signaling RAF activation MAP2K and MAPK activation Negative feedback regulation of MAPK pathway Negative regulation of MAPK pathway Signaling by moderate kinase activity BRAF mutants Signaling by high-kinase activity BRAF mutants Signaling by BRAF and RAF1 fusions Paradoxical activation of RAF signaling by kinase inactive BRAF Signaling downstream of RAS mutants Signaling by RAF1 mutants SHOC2 M1731 mutant abolishes MRAS complex function Gain-of-function MRAS complexes activate RAF signaling IFNG signaling activates MAPKs
Drugs			Sorafenib LErafAON XL281 iCo-007 Cholecystokinin Regorafenib Dabrafenib Fostamatinib
Diseases
GWAS		Bone mineral content ( 31790847) Severe COVID-19 infection with respiratory failure (analysis I) ( 32558485) Severe COVID-19 infection with respiratory failure (analysis II) ( 32558485)	A body shape index ( 34021172) Asthma ( 32296059) Cardiac hypertrophy ( 21348951) Carotid intima media thickness x smoking interaction ( 32117412) Cholesterol, total ( 20686565 24097068) Electrocardiogram morphology (amplitude at temporal datapoints) ( 32916098) HDL cholesterol levels ( 32203549) Hip index ( 34021172) Total cholesterol levels ( 28334899) Waist circumference adjusted for body mass index ( 34021172) Waist-hip index ( 34021172) Waist-to-hip ratio adjusted for BMI ( 26426971 34021172) Waist-to-hip ratio adjusted for BMI (age <50) ( 26426971) Waist-to-hip ratio adjusted for BMI (age >50) ( 26426971) Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) ( 26426971)
Interacting Genes		4 interacting genes: APP KDM1A PRMT6 RAF1	161 interacting genes: ABCB5 ADCY6 AGTR1 AKT1 AR ARNT ARRB2 BAD BAG1 BCL2 BCL2L1 BCL6 BECN1 BIRC2 BIRC3 BRAF CASZ1 CBLC CCND2 CCT3 CD44 CDC25A CDC37 CDK4 CDK6 CDKN2A CDKN2B CDKN2C CFLAR CNKSR1 COPS3 COPS7A CPS1 DCAF8 DMPK EFEMP1 ERBB2 ERBIN FGFR4 FYCO1 FYN GLIS2 GNB2 GNG4 GRB10 GRM1 HECTD3 HERC1 HGF HRAS HSP90AA1 HSP90AB1 HSPA4 HSPA8 IL2RB INSR INTS10 ITCH JAK1 JAK2 KEAP1 KRAS KRT18 KRT8 KSR1 KSR2 LATS2 LCK LRPAP1 MAP2K1 MAP2K2 MAP2K3 MAP2K5 MAP2K6 MAP3K1 MAP3K5 MAPK1 MAPK3 MAPK7 MAPK8 MAPK8IP3 MBP MET MRAS MRC2 MYBPC1 MYC NEDD4 NF1 NF2 NPLOC4 NR3C1 NRAS NUDT14 OIP5 PACSIN3 PAK1 PAK2 PAK3 PBK PDGFRA PDGFRB PDLIM2 PEBP1 PEBP4 PEX5L PHB1 PHKA2 PIN1 PKM PPP1CC PPP2CB PRKAA1 PRKACA PRKAR1A PRKCA PRKCD PRKCE PRKCZ PRKG1 PRPF6 RANBP9 RAP1A RAP2A RASD2 RASSF1 RB1 RBBP8 RBL2 RFXANK RHEB RRAS RRAS2 RSU1 SFN SHOC2 SPRY2 SPRY4 SRC STK26 STK3 STUB1 TBXA2R TEAD2 TERT TIMM50 TMEM70 TRIM22 TSC22D3 UBE2D2 USP7 VAV1 VDAC1 WEE2-AS1 XIAP YWHAB YWHAE YWHAG YWHAH YWHAZ YY1
Entrez ID		79443	5894
HPRD ID		06215	01265
Ensembl ID		ENSG00000163820	ENSG00000132155
Uniprot IDs		Q9BQS8	A0A0S2Z4L5 A0A0S2Z559 B4E0X2 L7RRS6 P04049
PDB IDs		5CX3 5D94 7BQI	1C1Y 1FAQ 1FAR 1GUA 1RFA 3CU8 3IQJ 3IQU 3IQV 3KUC 3KUD 3NKX 3O8I 3OMV 4FJ3 4G0N 4G3X 4IEA 4IHL 6NTC 6NTD 6PTS 6PTW 6VJJ 6XGU 6XGV 6XHA 6XHB 6XI7 7JHP 7Z37 7Z38 8A68 8A6F 8A6H 8ATR 8ATS 8AV0 8CHF 8CPD 8EPW 8GAE 8GFT 8JOF 8JOG 8S42 8T74 8T75 8U1L 9AXA 9AXC 9AY7 9AYA
Enriched GO Terms of Interacting Partners?		Acetylcholine Receptor Activator Activity Amyloid-beta Complex Regulation Of Cellular Component Organization PTB Domain Binding Growth Cone Lamellipodium Collateral Sprouting In Absence Of Injury Regulation Of Protein Import Enzyme Binding Regulation Of Response To Calcium Ion Amylin Binding Endosome To Plasma Membrane Transport Vesicle Neuron Maturation Positive Regulation Of Toll Signaling Pathway Positive Regulation Of Endothelin Production Growth Cone Filopodium Cellular Response To CAMP Lipoprotein Particle Chromatin Binding Phospholipase D-activating G Protein-coupled Receptor Signaling Pathway Regulation Of Apoptotic Signaling Pathway Positive Regulation Of Protein Import Microglia Development Glial Cell Development Positive Regulation Of G Protein-coupled Receptor Internalization Response To CAMP Protein Localization To Extracellular Region Establishment Of Protein Localization To Extracellular Region Protein Secretion Death-inducing Signaling Complex Assembly Telomeric Repeat-containing RNA Binding Regulation Of Signal Transduction By P53 Class Mediator FAD-dependent H3K4me/H3K4me3 Demethylase Activity Negative Regulation Of Transcription Initiation-coupled Chromatin Remodeling Histone H3R2 Methyltransferase Activity Histone H2AR3 Methyltransferase Activity Histone Arginine N-methyltransferase Activity Regulation Of Extrinsic Apoptotic Signaling Pathway Response To Purine-containing Compound Chromatin Remodeling Response To Norepinephrine Regulation Of Endoplasmic Reticulum Stress-induced Neuron Intrinsic Apoptotic Signaling Pathway Intermediate-density Lipoprotein Particle Regulation Of Cell Differentiation Axon Midline Choice Point Recognition Positive Regulation Of Amyloid Fibril Formation Cell Maturation Regulation Of Protein Metabolic Process Cellular Response To Norepinephrine Stimulus Growth Factor Receptor Binding Main Axon	Intracellular Signal Transduction Intracellular Signaling Cassette Regulation Of Intracellular Signal Transduction Signal Transduction Regulation Of MAPK Cascade MAPK Cascade Regulation Of Signal Transduction Regulation Of Signaling Regulation Of Cell Communication Protein Kinase Activity Cytosol Kinase Activity Nucleotide Binding Positive Regulation Of Signal Transduction Positive Regulation Of Intracellular Signal Transduction Positive Regulation Of Cell Communication Positive Regulation Of Signaling Protein Serine Kinase Activity Negative Regulation Of Programmed Cell Death Negative Regulation Of Apoptotic Process Regulation Of Programmed Cell Death Regulation Of Apoptotic Process ATP Binding Protein Serine/threonine Kinase Activity Regulation Of Protein Metabolic Process Protein Phosphorylation Protein Kinase Binding Regulation Of Protein Modification Process Cell Surface Receptor Signaling Pathway Negative Regulation Of Signal Transduction Regulation Of Cellular Component Organization Cell Surface Receptor Protein Tyrosine Kinase Signaling Pathway Phosphorylation Positive Regulation Of MAPK Cascade Negative Regulation Of Signaling Negative Regulation Of Cell Communication Protein Modification Process Regulation Of Metabolic Process Protein Tyrosine Kinase Activity Negative Regulation Of Intracellular Signal Transduction Transferase Activity Regulation Of Multicellular Organismal Process Cellular Response To Stress Regulation Of Developmental Process Cytoplasm Enzyme-linked Receptor Protein Signaling Pathway Positive Regulation Of Metabolic Process Positive Regulation Of Protein Metabolic Process Regulation Of Protein Localization Regulation Of Primary Metabolic Process
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