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RARA and NRIP1
Number of citations of the paper that reports this interaction (PubMedID
10082574
)
66
Data Source:
BioGRID
(two hybrid, pull down)
HPRD
(in vitro, two hybrid)
RARA
NRIP1
Description
retinoic acid receptor alpha
nuclear receptor interacting protein 1
Image
GO Annotations
Cellular Component
Chromatin
Nucleus
Nucleoplasm
Transcription Regulator Complex
Nucleolus
Cytoplasm
Cytosol
Plasma Membrane
Actin Cytoskeleton
Dendrite
Protein-containing Complex
Perinuclear Region Of Cytoplasm
RNA Polymerase II Transcription Regulator Complex
Histone Deacetylase Complex
Chromatin
Fibrillar Center
Nucleus
Nucleoplasm
Nucleolus
Cytosol
Nuclear Speck
Molecular Function
MRNA Regulatory Element Binding Translation Repressor Activity
Transcription Cis-regulatory Region Binding
RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
DNA-binding Transcription Factor Activity, RNA Polymerase II-specific
DNA-binding Transcription Repressor Activity
Transcription Coactivator Binding
Retinoic Acid Binding
DNA Binding
Chromatin Binding
DNA-binding Transcription Factor Activity
Nuclear Receptor Activity
Signaling Receptor Binding
Protein Binding
Zinc Ion Binding
Enzyme Binding
Protein Domain Specific Binding
Chromatin DNA Binding
Histone Deacetylase Binding
Protein Kinase B Binding
Sequence-specific DNA Binding
Retinoic Acid-responsive Element Binding
Metal Ion Binding
MRNA 5'-UTR Binding
Protein Kinase A Binding
Alpha-actinin Binding
Heterocyclic Compound Binding
Sequence-specific Double-stranded DNA Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Transcription Coregulator Activity
Transcription Coactivator Activity
Transcription Corepressor Activity
Signaling Receptor Binding
Protein Binding
Nuclear Receptor Binding
Nuclear Estrogen Receptor Binding
Nuclear Glucocorticoid Receptor Binding
Histone Deacetylase Binding
Nuclear Retinoic Acid Receptor Binding
Nuclear Retinoid X Receptor Binding
Biological Process
Negative Regulation Of Transcription By RNA Polymerase II
Ureteric Bud Development
Neural Tube Closure
Liver Development
Glandular Epithelial Cell Development
Outflow Tract Septum Morphogenesis
Growth Plate Cartilage Development
Regulation Of DNA-templated Transcription
Protein Phosphorylation
Germ Cell Development
Spermatogenesis
Female Pregnancy
Positive Regulation Of Cell Population Proliferation
Negative Regulation Of Cell Population Proliferation
Male Gonad Development
Positive Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Translation
Hippocampus Development
Cell Differentiation
Prostate Gland Development
Regulation Of Granulocyte Differentiation
Negative Regulation Of Granulocyte Differentiation
Embryonic Camera-type Eye Development
Regulation Of Myelination
Response To Estradiol
Response To Retinoic Acid
Negative Regulation Of Type II Interferon Production
Negative Regulation Of Tumor Necrosis Factor Production
Positive Regulation Of Interleukin-13 Production
Positive Regulation Of Interleukin-4 Production
Positive Regulation Of Interleukin-5 Production
Response To Vitamin A
Response To Cytokine
Multicellular Organism Growth
MRNA Transcription By RNA Polymerase II
Regulation Of Apoptotic Process
Negative Regulation Of Apoptotic Process
Apoptotic Cell Clearance
Response To Ethanol
Negative Regulation Of Cell Differentiation
Positive Regulation Of T-helper 2 Cell Differentiation
Positive Regulation Of Neuron Differentiation
Positive Regulation Of Cell Cycle
Negative Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of Transcription By RNA Polymerase II
Regulation Of Synaptic Plasticity
Retinoic Acid Receptor Signaling Pathway
Positive Regulation Of Binding
Ventricular Cardiac Muscle Cell Differentiation
Sertoli Cell Fate Commitment
Limb Development
Face Development
Bone Development
Trachea Cartilage Development
Chondroblast Differentiation
Negative Regulation Of Cartilage Development
Cellular Response To Lipopolysaccharide
Cellular Response To Retinoic Acid
Cellular Response To Estrogen Stimulus
Nuclear Protein Quality Control By The Ubiquitin-proteasome System
Regulation Of Hematopoietic Progenitor Cell Differentiation
Negative Regulation Of MiRNA Transcription
Negative Regulation Of Transcription By RNA Polymerase II
Ovarian Follicle Rupture
Regulation Of Transcription By RNA Polymerase II
Circadian Rhythm
Lipid Storage
Ovulation
Circadian Regulation Of Gene Expression
Positive Regulation Of Transcription By RNA Polymerase II
Rhythmic Process
Cellular Response To Estradiol Stimulus
Pathways
Nuclear Receptor transcription pathway
SUMOylation of intracellular receptors
Signaling by Retinoic Acid
Activation of anterior HOX genes in hindbrain development during early embryogenesis
Transcriptional regulation of granulopoiesis
Transcriptional regulation of granulopoiesis
TGFBR3 expression
SUMOylation of transcription cofactors
Estrogen-dependent gene expression
NR1H2 & NR1H3 regulate gene expression linked to lipogenesis
NR1H2 & NR1H3 regulate gene expression linked to gluconeogenesis
Heme signaling
Expression of BMAL (ARNTL), CLOCK, and NPAS2
RORA,B,C and NR1D1 (REV-ERBA) regulate gene expression
Drugs
Adapalene
Acitretin
Alitretinoin
Tretinoin
Tazarotene
Etretinate
Isotretinoin
Tamibarotene
LGD-1550
Trifarotene
4-HYDROXY-N'-(4-ISOPROPYLBENZYL)BENZOHYDRAZIDE
Diseases
Isolated orofacial clefts, including: Cleft lip with or without cleft palate; Cleft palate
Acute myeloid leukemia (AML)
GWAS
Asthma (
31619474
)
Alcohol dependence (
26365420
)
Birth weight (
27680694
31043758
)
Blood urea nitrogen levels (
31152163
)
Breast cancer (
23535729
29059683
)
Chronic kidney disease (
31152163
)
Cognitive performance (
19734545
)
Crohn's disease (
25489960
)
Depression in smokers (
30219690
)
Eosinophil count (
32888494
)
Eosinophil percentage of white cells (
32888494
)
Estimated glomerular filtration rate (
31152163
31451708
30604766
31015462
)
Estimated glomerular filtration rate in non-diabetics (
31451708
)
Gastroesophageal reflux disease (
31527586
)
HDL cholesterol levels (
32203549
)
Hematocrit (
32888494
)
Hemoglobin (
32888494
)
Lymphocyte count (
32888494
)
Medication use (agents acting on the renin-angiotensin system) (
31015401
)
Medication use (diuretics) (
31015401
)
Monocyte count (
32888494
)
Monocyte percentage of white cells (
32888494
)
Mosaic loss of chromosome Y (Y chromosome dosage) (
31624269
)
Platelet count (
32888494
)
Platelet distribution width (
27863252
32888494
)
Plateletcrit (
32888494
)
Pulse pressure (
27841878
)
Red blood cell count (
32888494
)
Refractive error (
32231278
)
Spherical equivalent or myopia (age of diagnosis) (
29808027
)
Systolic blood pressure (
27841878
)
White blood cell count (
32888494
)
Interacting Genes
96 interacting genes:
ACTN4
AKT1
ALOX15B
ALX1
ARID1A
ARID5A
BAG1
BBS4
BMAL1
BTG1
CCND3
CCNDBP1
CDK7
CEBPA
CLOCK
CNOT1
COPS2
E2F1
ESR1
FGFR1
FN1
FOXO1
GADD45G
GATA2
HDAC1
HDAC3
HDAC4
HMGA1
HR
IRX4
ITGB1BP2
KAT2B
KDM5A
KLF5
LRIF1
MAPK6
MCRS1
MDM2
MECR
MED1
MED25
MED6
MMS19
NCOA1
NCOA2
NCOA3
NCOA6
NCOR1
NCOR2
NKX2-1
NPAS2
NR0B2
NR1H2
NR1H3
NR2C1
NR2E3
NR3C1
NRBF2
NRIP1
NRIP2
NSD1
PARP1
PHF8
PIN1
PLEKHF2
PML
PNRC2
POU2F1
PRAME
PRDX6
PRKCA
PSMC5
RXRA
RXRB
RXRG
S100A3
SIRT1
SMARCD3
SNW1
SP1
SPEN
SRC
SRF
STAT5B
TADA3
TEKT4
THRB
TNIP1
TOP2B
TRIM24
TRIP4
UBE3A
UBQLN1
UBR5
USP7
ZBTB16
124 interacting genes:
ACBD3
ACTN2
AGR2
AHR
AKAP6
ANKRD24
APP
AR
ARPC3
BAIAP2
BRCA1
CCDC85B
CDK8
CEP70
CIB1
CLPB
COG4
CREBZF
CRNKL1
CTBP1
CTBP2
DNMT1
DNMT3A
DNMT3B
DST
DYNC2I1
E2F1
ERC2
ESR1
ESR2
ESRRA
ESRRB
ESRRG
EXOC7
FEZ1
FMNL2
GPRASP3
GPSM2
HDAC1
HDAC2
HDAC3
HDAC5
HDAC9
HECTD1
HNF4A
HSPA5
HUWE1
IMMT
IPO5
IQGAP1
JAKMIP3
JUN
KALRN
KANK2
KAT2B
KDM5B
KIF3A
KIF5A
KLHL7
KPNA3
KPNA4
LDOC1
LRRCC1
MACF1
MAP3K7
MAPK8IP3
MLLT3
MTMR10
NCKAP5
NR0B1
NR1H2
NR1H3
NR2C1
NR3C1
NR5A1
NR5A2
NSUN2
OAZ1
ODF2
PIAS1
PIAS3
PKNOX1
PKNOX2
PLAAT3
PLK2
PPARA
PPARD
PPARG
PRMT1
PSMD1
RABEP1
RARA
RARB
RORB
RXRA
RXRB
RXRG
SCG2
SCG3
SESTD1
SF3B1
SHTN1
SNX1
SPTB
SPTBN1
TERF1
TEX11
THRA
THRB
TMEM131
TNFRSF14
TRAF2
TRIM8
TRIM9
TRIP12
TTLL5
TULP3
TXLNG
TXNDC11
UBE2I
VDR
YWHAH
ZNF365
ZNF821
Entrez ID
5914
8204
HPRD ID
06769
03927
Ensembl ID
ENSG00000131759
ENSG00000180530
Uniprot IDs
A8K840
A8MUP8
F1D8N9
P10276
Q6I9R7
A8K171
P48552
PDB IDs
1DKF
1DSZ
3A9E
3KMR
3KMZ
4DQM
5K13
6XWG
7AOS
7APO
7QAA
7WQQ
9GFE
9GFI
2GPO
2GPP
4S14
4S15
5NTI
5NTN
5NTW
5NU1
6FZU
6G05
6G07
9CWN
Enriched GO Terms of Interacting Partners
?
Regulation Of RNA Biosynthetic Process
Regulation Of RNA Metabolic Process
Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of RNA Biosynthetic Process
Positive Regulation Of DNA-templated Transcription
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Macromolecule Biosynthetic Process
Nucleus
Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Biosynthetic Process
Regulation Of Gene Expression
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
Negative Regulation Of RNA Metabolic Process
Positive Regulation Of Macromolecule Metabolic Process
Nucleoplasm
Positive Regulation Of Metabolic Process
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Primary Metabolic Process
Regulation Of Macromolecule Metabolic Process
Positive Regulation Of Transcription By RNA Polymerase II
Chromatin
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Metabolic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Transcription By RNA Polymerase II
Negative Regulation Of Macromolecule Metabolic Process
Nuclear Retinoic Acid Receptor Binding
Nuclear Receptor Binding
Nuclear Receptor-mediated Signaling Pathway
Negative Regulation Of Metabolic Process
Hormone-mediated Signaling Pathway
Intracellular Receptor Signaling Pathway
Response To Hormone
Nuclear Retinoid X Receptor Binding
Rhythmic Process
Transcription Regulator Complex
Steroid Hormone Receptor Signaling Pathway
Nuclear Receptor-mediated Steroid Hormone Signaling Pathway
Transcription Coactivator Activity
Retinoic Acid Receptor Signaling Pathway
Sequence-specific DNA Binding
Regulation Of Developmental Process
Chromatin Binding
Nuclear Estrogen Receptor Binding
RNA Polymerase II Cis-regulatory Region Sequence-specific DNA Binding
Chromatin DNA Binding
Nuclear Receptor Activity
Intracellular Receptor Signaling Pathway
Nuclear Receptor-mediated Signaling Pathway
Hormone-mediated Signaling Pathway
Nuclear Steroid Receptor Activity
Steroid Hormone Receptor Signaling Pathway
Nuclear Receptor-mediated Steroid Hormone Signaling Pathway
Negative Regulation Of Nucleobase-containing Compound Metabolic Process
Chromatin
Negative Regulation Of RNA Metabolic Process
Sequence-specific DNA Binding
Retinoic Acid Receptor Signaling Pathway
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of RNA Biosynthetic Process
RNA Polymerase II Transcription Regulator Complex
DNA-binding Transcription Factor Activity
Intracellular Signal Transduction
Negative Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of DNA-templated Transcription
Positive Regulation Of DNA-templated Transcription
Positive Regulation Of RNA Biosynthetic Process
Regulation Of RNA Biosynthetic Process
Positive Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Macromolecule Biosynthetic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of RNA Metabolic Process
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Regulation Of Transcription By RNA Polymerase II
Positive Regulation Of Biosynthetic Process
Positive Regulation Of Metabolic Process
Nucleoplasm
Estrogen Response Element Binding
Transcription Coregulator Binding
Sequence-specific Double-stranded DNA Binding
Enzyme Binding
Regulation Of Primary Metabolic Process
Regulation Of Developmental Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Macromolecule Biosynthetic Process
Regulation Of Macromolecule Biosynthetic Process
Regulation Of Gene Expression
Cytoplasm
Nucleus
Negative Regulation Of Biosynthetic Process
DNA Binding
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Regulation Of Metabolic Process
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Tagcloud (Intersection)
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