SREK1IP1 and GTF2H4

Number of citations of the paper that reports this interaction (PubMedID 32296183)
50

Data Source:
BioGRID (two hybrid)

		SREK1IP1	GTF2H4
Description		SREK1 interacting protein 1	general transcription factor IIH subunit 4
Image		No pdb structure
GO Annotations	Cellular Component		Core TFIIH Complex Portion Of Holo TFIIH Complex Transcription Factor TFIIH Core Complex Nucleus Nucleoplasm Transcription Factor TFIID Complex Transcription Factor TFIIH Holo Complex Nuclear Speck
	Molecular Function	Nucleic Acid Binding Protein Binding Zinc Ion Binding Metal Ion Binding	ATPase Activator Activity Double-stranded DNA Binding Protein Binding RNA Polymerase II General Transcription Initiation Factor Activity
	Biological Process	MRNA Processing RNA Splicing	DNA Repair Nucleotide-excision Repair Transcription By RNA Polymerase II DNA Damage Response
Pathways			Formation of RNA Pol II elongation complex Formation of the Early Elongation Complex Formation of HIV elongation complex in the absence of HIV Tat Formation of the HIV-1 Early Elongation Complex RNA Pol II CTD phosphorylation and interaction with CE during HIV infection HIV Transcription Initiation RNA Polymerase II HIV Promoter Escape Transcription of the HIV genome Formation of HIV-1 elongation complex containing HIV-1 Tat Tat-mediated elongation of the HIV-1 transcript NoRC negatively regulates rRNA expression Formation of Incision Complex in GG-NER Dual Incision in GG-NER RNA Polymerase II Pre-transcription Events Formation of TC-NER Pre-Incision Complex Transcription-Coupled Nucleotide Excision Repair (TC-NER) Dual incision in TC-NER Gap-filling DNA repair synthesis and ligation in TC-NER TP53 Regulates Transcription of DNA Repair Genes mRNA Capping RNA Polymerase I Transcription Initiation RNA Polymerase I Promoter Escape RNA Polymerase II Promoter Escape RNA Polymerase II Transcription Pre-Initiation And Promoter Opening RNA Polymerase I Transcription Termination RNA Polymerase II Transcription Initiation RNA Polymerase II Transcription Elongation RNA Polymerase II Transcription Initiation And Promoter Clearance RNA Pol II CTD phosphorylation and interaction with CE
Drugs
Diseases
GWAS		General cognitive ability ( 29844566)	Autism spectrum disorder or schizophrenia ( 28540026) Conotruncal heart defects (maternal effects) ( 28468790) Malaria ( 31844061) Sarcoidosis (Lofgren's syndrome vs non-Lofgren's syndrome) ( 26651848) Schizophrenia ( 28991256) Ulcerative colitis ( 20848476)
Interacting Genes		29 interacting genes: AGPAT3 CCNL1 CT45A1 DDIT4L ELOA2 FGF10 GTF2H4 H2BC15 HPRT1 HSD17B14 LYAR MACROH2A1 NKAPD1 NKAPL NME1 PPCDC PRPF40A PRR13 RBM39 RNF151 RP9 RP9P RPL9 SDCBP SDCBP2 SPMIP2 STAC3 THAP1 UBC	13 interacting genes: EAF1 EIF1AD ERCC3 ERCC5 GTF2B GTF2E1 GTF2F1 POLR2A SREK1IP1 TBP TP53 UBC XBP1P1
Entrez ID		285672	2968
HPRD ID		08210	03456
Ensembl ID		ENSG00000153006	ENSG00000213780
Uniprot IDs		Q8N9Q2	A0A1U9X7S4 Q92759
PDB IDs			5IVW 5IY6 5IY7 5IY8 5IY9 5OF4 6NMI 6O9L 6O9M 6RO4 7AD8 7EGB 7EGC 7ENA 7ENC 7LBM 7NVR 7NVV 7NVW 7NVX 7NVY 7NVZ 7NW0 8BVW 8BYQ 8EBS 8EBT 8EBU 8EBV 8EBW 8EBX 8EBY 8GXQ 8GXS 8WAK 8WAL 8WAN 8WAO 8WAP 8WAQ 8WAR 8WAS
Enriched GO Terms of Interacting Partners?			Transcription Factor TFIID Complex Transcription Initiation At RNA Polymerase II Promoter Promoter-specific Chromatin Binding DNA-templated Transcription Initiation DNA-templated Transcription RNA Polymerase II General Transcription Initiation Factor Activity Transcription Elongation By RNA Polymerase II Transcription By RNA Polymerase II DNA-templated Transcription Elongation Nucleobase-containing Compound Biosynthetic Process Nucleoplasm RNA Metabolic Process Nucleic Acid Metabolic Process Nucleobase-containing Compound Metabolic Process Macromolecule Biosynthetic Process Nucleotide-excision Repair RNA Polymerase II General Transcription Initiation Factor Binding MRNA Transcription Macromolecule Metabolic Process Transcription-coupled Nucleotide-excision Repair Transcription Preinitiation Complex Response To UV-C Nucleus Ubiquitin Protein Ligase Binding Core Promoter Sequence-specific DNA Binding RNA Polymerase II Core Promoter Sequence-specific DNA Binding Nuclear Body Response To UV RNA Polymerase II Complex Binding 14-3-3 Protein Binding Protein-DNA Complex Assembly RNA Polymerase II-specific DNA-binding Transcription Factor Binding Molecular Condensate Scaffold Activity Nucleotide-excision Repair Factor 3 Complex Transcriptional Start Site Selection At RNA Polymerase II Promoter RNA Polymerase II Preinitiation Complex Assembly MRNA Transcription By RNA Polymerase II Negative Regulation Of Helicase Activity Negative Regulation Of G1 To G0 Transition DNA Binding Transcription Preinitiation Complex Assembly Neuron Intrinsic Apoptotic Signaling Pathway In Response To Oxidative Stress P53 Binding Cellular Response To Diamide Damaged DNA Binding RNA Polymerase II Core Complex Assembly Transcription Factor TFIIE Complex TFIIF-class Transcription Factor Complex Binding Transcription Factor TFIIF Complex MRNA Metabolic Process
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?