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RPA2 and SF1
Number of citations of the paper that reports this interaction (PubMedID
37827155
)
181
Data Source:
BioGRID
(two hybrid, proximity labelling technology)
RPA2
SF1
Description
replication protein A2
splicing factor 1
Image
GO Annotations
Cellular Component
Chromosome, Telomeric Region
Chromatin
Nucleus
Nucleoplasm
DNA Replication Factor A Complex
Nuclear Body
PML Body
Site Of Double-strand Break
Nucleus
Nucleoplasm
Spliceosomal Complex
Ribosome
U2AF Complex
Molecular Function
DNA Binding
Damaged DNA Binding
Single-stranded DNA Binding
Protein Binding
Enzyme Binding
Protein Phosphatase Binding
Ubiquitin Protein Ligase Binding
Telomeric DNA Binding
G-rich Strand Telomeric DNA Binding
Nucleic Acid Binding
Transcription Corepressor Activity
RNA Binding
MRNA Binding
Protein Binding
Zinc Ion Binding
Identical Protein Binding
Metal Ion Binding
Biological Process
DNA Damage Checkpoint Signaling
Telomere Maintenance
Double-strand Break Repair Via Homologous Recombination
DNA Replication
DNA Repair
Base-excision Repair
Nucleotide-excision Repair
Mismatch Repair
DNA Recombination
DNA Damage Response
Regulation Of Double-strand Break Repair Via Homologous Recombination
Mitotic G1 DNA Damage Checkpoint Signaling
Protein Localization To Chromosome
Regulation Of DNA Damage Checkpoint
Spliceosomal Complex Assembly
MRNA 3'-splice Site Recognition
MRNA Splicing, Via Spliceosome
MRNA Processing
RNA Splicing
MRNA Cis Splicing, Via Spliceosome
Negative Regulation Of DNA-templated Transcription
Negative Regulation Of Smooth Muscle Cell Proliferation
Regulation Of Primary Metabolic Process
Pathways
Translesion synthesis by REV1
Recognition of DNA damage by PCNA-containing replication complex
Translesion Synthesis by POLH
Removal of the Flap Intermediate from the C-strand
Activation of ATR in response to replication stress
Regulation of HSF1-mediated heat shock response
HSF1 activation
Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)
Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)
PCNA-Dependent Long Patch Base Excision Repair
Translesion synthesis by POLK
Translesion synthesis by POLI
Termination of translesion DNA synthesis
HDR through Single Strand Annealing (SSA)
HDR through Homologous Recombination (HRR)
Processing of DNA double-strand break ends
Presynaptic phase of homologous DNA pairing and strand exchange
Formation of Incision Complex in GG-NER
Gap-filling DNA repair synthesis and ligation in GG-NER
Dual Incision in GG-NER
Dual incision in TC-NER
Gap-filling DNA repair synthesis and ligation in TC-NER
Fanconi Anemia Pathway
Regulation of TP53 Activity through Phosphorylation
Activation of the pre-replicative complex
Removal of the Flap Intermediate
G2/M DNA damage checkpoint
Meiotic recombination
Impaired BRCA2 binding to RAD51
mRNA Splicing - Major Pathway
Drugs
Artenimol
Diseases
GWAS
HDL cholesterol levels (
32203549
)
Platelet count (
32888494
)
Plateletcrit (
32888494
)
White blood cell count (
32888494
)
Mean reticulocyte volume (
32888494
)
Urate levels (
21768215
)
Interacting Genes
69 interacting genes:
ACP5
AKAP9
APP
ATM
CALCOCO2
CASK
CCNC
CCNO
CDK1
CEBPA
CEP126
CFB
COPS6
CRMP1
DMRTB1
EEF1A1
ERCC1
ERCC4
EXOSC7
GAPDH
GOLM1
HERPUD1
HIRA
HNRNPUL1
HUS1
LNX2
LRIF1
MARK2
MCM2
MCM5
MED31
MEN1
NDEL1
ORC1
ORC2
ORC5
PCM1
PIAS1
PIAS4
PRC1
PRKDC
RAD1
RAD51
RAD52
RAD9A
RBM14
RBM48
RNF20
RNF40
RPA1
RPA3
RPLP1
SDF4
SERTAD3
SF1
SLC17A9
SMARCAL1
STAT3
TLE1
TP53
TUBB2A
UNC119
UNG
UTP14A
WAS
WRN
XPA
YWHAE
ZBTB14
91 interacting genes:
ALG13
APBB1
APOBEC3C
ATXN1
BAG4
BCAS2
BCL2
BUD31
CDC42
CEBPA
CEP55
CPSF7
CTBP1
CTTN
DCN
DDX17
DMRTB1
DUX4L9
EWSR1
EXOSC1
EXOSC8
FAM168A
FUS
GAS7
HNRNPF
HNRNPH1
HNRNPH2
HNRNPK
HNRNPUL1
IDH3A
IL7R
ILF3
ITCH
KHDRBS2
KPNA1
KRT31
KRTAP26-1
LINC00632
MIR106B
MIR155
MIR19B2
MIR34A
MIRLET7G
MKRN3
NCK2
NEIL3
NFKB1
OGT
OSTF1
PDAP1
PLSCR1
PRKG1
PRPF39
PRPF40A
PRRC2B
PSMA3
PUF60
PUS7
RBFOX2
RBM10
RBM17
RBM4
RBM7
RBMX
RBPMS
RPA2
RSPH1
SEC23A
SF3B1
SF3B4
SFPQ
SNRPA
TAF15
TCERG1
TFIP11
TNPO2
TRIM23
TRIM69
TTN
TXNL4B
U2AF2
UBL5
USO1
VEGFB
WBP4
WDR77
WDR83
WWP2
YTHDF1
YTHDF3
ZNF461
Entrez ID
6118
7536
HPRD ID
01566
03306
Ensembl ID
ENSG00000117748
ENSG00000168066
Uniprot IDs
B4DUL2
P15927
A0A7P0T9U7
A0A9L9PXE4
B4DX42
H7C561
Q15637
PDB IDs
1DPU
1L1O
1QUQ
1Z1D
2PI2
2PQA
2Z6K
3KDF
4MQV
4OU0
8RK2
9MJ5
1K1G
1O0P
1OPI
2M09
2M0G
4FXW
4FXX
7VH9
7VPX
8PXX
Enriched GO Terms of Interacting Partners
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DNA Metabolic Process
DNA Repair
Chromosome, Telomeric Region
Double-strand Break Repair
Nucleic Acid Metabolic Process
Nucleobase-containing Compound Metabolic Process
Nucleoplasm
DNA Damage Response
Double-strand Break Repair Via Homologous Recombination
Recombinational Repair
DNA Recombination
Macromolecule Metabolic Process
Response To Radiation
Nucleus
Telomere Maintenance
Response To Ionizing Radiation
Cellular Response To Stress
Cellular Response To Radiation
Nucleotide-excision Repair
Telomere Organization
DNA Replication Origin Binding
Site Of Double-strand Break
DNA Replication
Regulation Of DNA Metabolic Process
Damaged DNA Binding
Chromosome Organization
Single-stranded DNA Binding
Mitotic DNA Integrity Checkpoint Signaling
Nuclear Origin Of Replication Recognition Complex
Cellular Response To Ionizing Radiation
Regulation Of Cell Cycle
Response To Light Stimulus
Nucleotide-excision Repair Factor 1 Complex
Response To Gamma Radiation
DNA Replication Initiation
Response To Stress
Regulation Of Primary Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
UV Protection
Negative Regulation Of Cell Cycle
DNA Damage Checkpoint Signaling
DNA Replication Factor A Complex
Regulation Of Cellular Response To Stress
Response To UV
PML Body
Replicative Senescence
Mitotic DNA Damage Checkpoint Signaling
Base-excision Repair
Checkpoint Clamp Complex
Regulation Of Macromolecule Metabolic Process
RNA Splicing
MRNA Processing
MRNA Splicing, Via Spliceosome
RNA Splicing, Via Transesterification Reactions
RNA Processing
MRNA Metabolic Process
RNA Binding
RNA Metabolic Process
Nucleic Acid Binding
Regulation Of RNA Splicing
Nucleic Acid Metabolic Process
Spliceosomal Complex
Regulation Of MRNA Metabolic Process
Regulation Of MRNA Splicing, Via Spliceosome
Regulation Of MRNA Processing
Nucleobase-containing Compound Metabolic Process
Nucleoplasm
Nucleus
Macromolecule Metabolic Process
Regulation Of Alternative MRNA Splicing, Via Spliceosome
Alternative MRNA Splicing, Via Spliceosome
Regulation Of Metabolic Process
Regulation Of Macromolecule Metabolic Process
Catalytic Step 2 Spliceosome
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Metabolic Process
Negative Regulation Of Gene Expression
MRNA Binding
Regulation Of Primary Metabolic Process
Negative Regulation Of Macromolecule Metabolic Process
Regulation Of Nucleobase-containing Compound Metabolic Process
Negative Regulation Of Biosynthetic Process
Nuclear Speck
Negative Regulation Of Macromolecule Biosynthetic Process
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of MRNA Metabolic Process
U2-type Prespliceosome
Identical Protein Binding
Regulatory NcRNA-mediated Gene Silencing
Positive Regulation Of Macromolecule Biosynthetic Process
Positive Regulation Of Macromolecule Metabolic Process
Regulation Of RNA Metabolic Process
Positive Regulation Of RNA Metabolic Process
Ribonucleoprotein Complex
Negative Regulation Of MRNA Splicing, Via Spliceosome
MRNA 3'-UTR Binding
Positive Regulation Of Nucleobase-containing Compound Metabolic Process
Positive Regulation Of Biosynthetic Process
Negative Regulation Of RNA Splicing
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Tagcloud (Intersection)
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