RPS3 and NFKB1

Number of citations of the paper that reports this interaction (PMID 18045535)
60

Data Source:
HPRD (in vivo)

		RPS3	NFKB1
Gene Name		ribosomal protein S3	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1
Image
Gene Ontology Annotations	Cellular Component	Nucleus Nucleolus Cytoplasm Mitochondrial Inner Membrane Spindle Cytosol Focal Adhesion Membrane Cytosolic Small Ribosomal Subunit Ribonucleoprotein Complex Ruffle Membrane Extracellular Vesicular Exosome NF-kappaB Complex	Nucleus Nucleoplasm Cytoplasm Mitochondrion Cytosol I-kappaB/NF-kappaB Complex
	Molecular Function	Damaged DNA Binding MRNA Binding Structural Constituent Of Ribosome DNA-(apurinic Or Apyrimidinic Site) Lyase Activity Protein Binding Oxidized Purine Nucleobase Lesion DNA N-glycosylase Activity Enzyme Binding Protein Kinase Binding Poly(A) RNA Binding Protein Kinase A Binding NF-kappaB Binding Iron-sulfur Cluster Binding	Regulatory Region DNA Binding Transcription Regulatory Region Sequence-specific DNA Binding RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding RNA Polymerase II Distal Enhancer Sequence-specific DNA Binding Transcription Factor Activity Involved In Positive Regulation Of Transcription RNA Polymerase II Transcription Regulatory Region Sequence-specific DNA Binding Transcription Factor Activity Involved In Negative Regulation Of Transcription Chromatin Binding Double-stranded DNA Binding Sequence-specific DNA Binding Transcription Factor Activity Protein Binding Transcription Factor Binding Heat Shock Protein Binding Protein Homodimerization Activity Transcription Regulatory Region DNA Binding
	Biological Process	Nuclear-transcribed MRNA Catabolic Process, Nonsense-mediated Decay DNA Catabolic Process, Endonucleolytic Cytoplasmic Translation DNA Repair Transcription, DNA-templated Translation Translational Initiation Translational Elongation Translational Termination Regulation Of Translation SRP-dependent Cotranslational Protein Targeting To Membrane Apoptotic Process Cellular Response To DNA Damage Stimulus Mitotic Nuclear Division Gene Expression Viral Process Viral Life Cycle Viral Transcription Cellular Protein Metabolic Process Negative Regulation Of DNA Repair Positive Regulation Of NF-kappaB Transcription Factor Activity Cell Division Positive Regulation Of DNA N-glycosylase Activity Positive Regulation Of Apoptotic Signaling Pathway	Negative Regulation Of Transcription From RNA Polymerase II Promoter Toll-like Receptor Signaling Pathway MyD88-dependent Toll-like Receptor Signaling Pathway MyD88-independent Toll-like Receptor Signaling Pathway Transcription From RNA Polymerase II Promoter Apoptotic Process Inflammatory Response Response To Oxidative Stress I-kappaB Kinase/NF-kappaB Signaling Positive Regulation Of Macrophage Derived Foam Cell Differentiation Positive Regulation Of Lipid Storage Negative Regulation Of Calcidiol 1-monooxygenase Activity Negative Regulation Of Vitamin D Biosynthetic Process Membrane Protein Intracellular Domain Proteolysis Negative Regulation Of Cellular Protein Metabolic Process Negative Regulation Of Cholesterol Transport Positive Regulation Of Type I Interferon Production Toll-like Receptor 2 Signaling Pathway Toll-like Receptor 3 Signaling Pathway Toll-like Receptor 4 Signaling Pathway Toll-like Receptor 5 Signaling Pathway Toll-like Receptor 9 Signaling Pathway Toll-like Receptor 10 Signaling Pathway TRIF-dependent Toll-like Receptor Signaling Pathway NIK/NF-kappaB Signaling Fc-epsilon Receptor Signaling Pathway Toll-like Receptor TLR1:TLR2 Signaling Pathway Toll-like Receptor TLR6:TLR2 Signaling Pathway Negative Regulation Of Apoptotic Process Negative Regulation Of Interleukin-12 Biosynthetic Process Innate Immune Response Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Transcription From RNA Polymerase II Promoter Response To Copper Ion Neurotrophin TRK Receptor Signaling Pathway Negative Regulation Of Inflammatory Response T Cell Receptor Signaling Pathway Positive Regulation Of NF-kappaB Transcription Factor Activity Cellular Response To Lipopolysaccharide Cellular Response To Mechanical Stimulus Cellular Response To Nicotine Cellular Response To Interleukin-1 Cellular Response To Interleukin-6 Cellular Response To Peptide Hormone Stimulus Positive Regulation Of Canonical Wnt Signaling Pathway Positive Regulation Of Hyaluronan Biosynthetic Process Positive Regulation Of MiRNA Metabolic Process
Pathways		Nonsense-Mediated Decay (NMD) Translation initiation complex formation Translation SRP-dependent cotranslational protein targeting to membrane Eukaryotic Translation Termination Peptide chain elongation Influenza Infection Viral mRNA Translation L13a-mediated translational silencing of Ceruloplasmin expression Influenza Life Cycle Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) Ribosomal scanning and start codon recognition Formation of the ternary complex, and subsequently, the 43S complex Influenza Viral RNA Transcription and Replication GTP hydrolysis and joining of the 60S ribosomal subunit Eukaryotic Translation Initiation Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S Formation of a pool of free 40S subunits Eukaryotic Translation Elongation Cap-dependent Translation Initiation Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)	Signaling by the B Cell Receptor (BCR) NF-kB is activated and signals survival Downstream TCR signaling Toll Like Receptor 7/8 (TLR7/8) Cascade Cellular Senescence RIP-mediated NFkB activation via ZBP1 Toll Like Receptor TLR6:TLR2 Cascade DEx/H-box helicases activate type I IFN and inflammatory cytokines production Activated TLR4 signalling Toll Like Receptor TLR1:TLR2 Cascade Downstream signaling events of B Cell Receptor (BCR) FCERI mediated NF-kB activation MyD88 cascade initiated on plasma membrane Toll Like Receptor 5 (TLR5) Cascade ZBP1(DAI) mediated induction of type I IFNs p75NTR signals via NF-kB Transcriptional regulation of white adipocyte differentiation MyD88 dependent cascade initiated on endosome TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation MyD88:Mal cascade initiated on plasma membrane Toll Like Receptor 9 (TLR9) Cascade Innate Immune System Regulated proteolysis of p75NTR Signalling by NGF TRIF-mediated TLR3/TLR4 signaling Cytosolic sensors of pathogen-associated DNA Senescence-Associated Secretory Phenotype (SASP) Cytokine Signaling in Immune system p75 NTR receptor-mediated signalling MyD88-independent cascade Toll Like Receptor 2 (TLR2) Cascade RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways Signaling by Interleukins TCR signaling Toll-Like Receptors Cascades Toll Like Receptor 10 (TLR10) Cascade Interleukin-1 processing Toll Like Receptor 3 (TLR3) Cascade Toll Like Receptor 4 (TLR4) Cascade Activation of NF-kappaB in B cells Fc epsilon receptor (FCERI) signaling TRAF6 mediated NF-kB activation Interleukin-1 signaling Adaptive Immune System TAK1 activates NFkB by phosphorylation and activation of IKKs complex
Drugs			Thalidomide Pranlukast Triflusal
Diseases
GWAS			Multiple sclerosis ( 21833088) Primary biliary cirrhosis ( 23000144 21399635) Schizophrenia (treatment refractory) ( 22479419) Ulcerative colitis ( 23128233)
Protein-Protein Interactions		14 interactors: ATP6V0D2 CCT2 CSNK2A1 FOLH1 HSP90AA1 IL7R MDM2 NDRG1 NFKB1 RELA RPL9 SUMO1 TP53 YWHAQ	102 interactors: ABCC2 AR ATF3 BCL3 BRCA1 BTRC CDK9 CEBPB CFLAR CHUK COPB2 COPS5 CTNNB1 E2F1 ECSIT ELF1 ELF3 EP300 ESR1 ETS1 FBXW11 FOS G3BP2 GLUL GSK3B HDAC1 HIF1AN HMGA1 HMGA2 HMGB1 HSPA4 IKBKB IKBKG IL2RA IRF1 IRF2 IRF8 IRF9 ITGB3BP KAT5 KLF5 KPNA3 LYL1 MAP3K8 MEN1 MPP6 MTPN NCOA1 NCOA6 NCOR2 NFKB2 NFKBIA NFKBIB NFKBIE NFKBIZ NFRKB NKRF NOTCH1 NR3C1 NR4A1 PARP1 PCBD1 PDCD11 PELP1 PLD3 PML PPARG PPP4C PRKACA PSMD10 REL RELA RELB RGS14 RIPK1 RPS3 RSF1 RXRA SERPINA3 SF1 SIN3A SP1 SPAG9 SPI1 SPPL2A SRF STAT3 STAT6 TAB2 TNFSF11 TNIP1 TNIP2 TP53BP1 TRIP4 TSC22D3 TXN UBE2D3 UBE2K UNC5CL YWHAQ YY1 ZBTB9
Entrez ID		6188	4790
HPRD ID		10941	01238
Ensembl ID		ENSG00000149273	ENSG00000109320
Uniprot IDs		P23396	P19838
PDB IDs		1WH9 3J3A	1MDI 1MDJ 1MDK 1NFI 1SVC 2DBF 2O61 3GUT
Enriched GO Terms of Interacting Partners?		Cellular Response To Alkaloid Immune Response Positive Regulation Of MiRNA Metabolic Process Membrane Organization Regulation Of Immune Response Enzyme Linked Receptor Protein Signaling Pathway Protein Localization To Organelle Immune System Process Cellular Response To Nicotine Signal Transduction DNA Damage Response, Signal Transduction By P53 Class Mediator Cell Surface Receptor Signaling Pathway Fc Receptor Signaling Pathway Regulation Of MiRNA Metabolic Process Negative Regulation Of Transcription, DNA-templated Response To Abiotic Stimulus Signal Transduction In Response To DNA Damage Regulation Of Interleukin-12 Biosynthetic Process Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Signaling Cellular Response To Hypoxia Cellular Response To Peptide Hormone Stimulus Response To Organic Substance Cellular Response To Decreased Oxygen Levels Chaperone-mediated Protein Complex Assembly Transmembrane Receptor Protein Tyrosine Kinase Signaling Pathway Cell Communication Cellular Response To Peptide Cellular Response To Oxygen Levels Signal Transduction By P53 Class Mediator Cellular Response To Organic Substance Protein Localization Membrane Protein Intracellular Domain Proteolysis Immune Response-regulating Cell Surface Receptor Signaling Pathway Regulation Of Immune System Process Negative Regulation Of Gene Expression Response To UV Regulation Of Protein Catabolic Process Negative Regulation Of Biosynthetic Process Cellular Protein Localization Innate Immune Response Regulation Of Proteasomal Ubiquitin-dependent Protein Catabolic Process Negative Regulation Of Mitotic Cell Cycle Phase Transition Response To Alkaloid Negative Regulation Of Cellular Metabolic Process Positive Regulation Of Protein Insertion Into Mitochondrial Membrane Involved In Apoptotic Signaling Pathway Response To Oxidative Stress Protein Targeting Regulation Of Apoptotic Process	Positive Regulation Of Transcription, DNA-templated Positive Regulation Of Macromolecule Biosynthetic Process Positive Regulation Of Gene Expression Positive Regulation Of Transcription From RNA Polymerase II Promoter Positive Regulation Of Cellular Biosynthetic Process Regulation Of Transcription From RNA Polymerase II Promoter Regulation Of Transcription, DNA-templated Regulation Of Nucleic Acid-templated Transcription Positive Regulation Of Cellular Metabolic Process Regulation Of RNA Biosynthetic Process Regulation Of RNA Metabolic Process Regulation Of Nitrogen Compound Metabolic Process Positive Regulation Of Metabolic Process Regulation Of Gene Expression Transcription, DNA-templated RNA Biosynthetic Process Transcription From RNA Polymerase II Promoter Response To Stress Gene Expression Negative Regulation Of Biosynthetic Process Regulation Of Metabolic Process RNA Metabolic Process Negative Regulation Of Nucleic Acid-templated Transcription Negative Regulation Of RNA Biosynthetic Process Negative Regulation Of Transcription, DNA-templated Response To Organic Substance Cellular Macromolecule Biosynthetic Process Macromolecule Biosynthetic Process Negative Regulation Of Gene Expression Negative Regulation Of Cellular Metabolic Process Cellular Response To Organic Substance Response To Stimulus Nucleobase-containing Compound Metabolic Process Cellular Response To Stimulus Cellular Aromatic Compound Metabolic Process Cellular Nitrogen Compound Metabolic Process Intracellular Receptor Signaling Pathway Heterocycle Metabolic Process Biosynthetic Process Nitrogen Compound Metabolic Process Cellular Response To Stress Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Defense Response Negative Regulation Of Transcription From RNA Polymerase II Promoter Immune System Process Positive Regulation Of Sequence-specific DNA Binding Transcription Factor Activity Regulation Of Cellular Process Regulation Of I-kappaB Kinase/NF-kappaB Signaling Signal Transduction Cell Communication
Tagcloud ?		apocytochrome infa l20 l22 l33 liverwort marchantia peta petb petd preprotein psbb psbe psbf psbh rpl14 rpl16 rpl2 rpl20 rpl22 rpl23 rpl33 rpoa rps11 rps12 rps18 rps8 secx ugg	30min ancestry asks asleep habitual ifng ifngr1 il10 il13 il17a il1b il1r2 il2 il4 il6 il8 interleukins nfkb2 pittsburgh rs1143623 rs1143642 rs1295686 rs2857602 rs4648110 rs4719714 soi strengthens tnfa transgender
Tagcloud (Difference) ?		apocytochrome infa l20 l22 l33 liverwort marchantia peta petb petd preprotein psbb psbe psbf psbh rpl14 rpl16 rpl2 rpl20 rpl22 rpl23 rpl33 rpoa rps11 rps12 rps18 rps8 secx ugg	30min ancestry asks asleep habitual ifng ifngr1 il10 il13 il17a il1b il1r2 il2 il4 il6 il8 interleukins nfkb2 pittsburgh rs1143623 rs1143642 rs1295686 rs2857602 rs4648110 rs4719714 soi strengthens tnfa transgender
Tagcloud (Intersection) ?