NKAPD1 and PRPF3

Number of citations of the paper that reports this interaction (PubMedID 32296183)
50

Data Source:
BioGRID (two hybrid)

		NKAPD1	PRPF3
Description		NKAP domain containing 1	pre-mRNA processing factor 3
Image		No pdb structure
GO Annotations	Cellular Component		Nucleus Nucleoplasm Spliceosomal Complex Cytosol Cajal Body Nuclear Speck Protein-containing Complex U4/U6 X U5 Tri-snRNP Complex U2-type Precatalytic Spliceosome
	Molecular Function	Protein Binding Identical Protein Binding	RNA Binding Protein Binding Identical Protein Binding
	Biological Process		Spliceosomal Tri-snRNP Complex Assembly RNA Splicing, Via Transesterification Reactions MRNA Splicing, Via Spliceosome MRNA Processing RNA Splicing
Pathways			mRNA Splicing - Major Pathway
Drugs
Diseases			Retinitis pigmentosa (RP)
GWAS			Alanine aminotransferase levels ( 33339817) Ambidextrousness ( 32989287) Brain morphology (min-P) ( 32665545) Brain morphology (MOSTest) ( 32665545) Chronotype ( 27494321) Cortical surface area (min-P) ( 32665545) Cortical surface area (MOSTest) ( 32665545) Cortical thickness (min-P) ( 32665545) Cortical thickness (MOSTest) ( 32665545) Hip index ( 34021172) Low density lipoprotein cholesterol levels ( 30498476) Morning person ( 30696823) Morning vs. evening chronotype ( 27494321) Platelet count ( 32888494 27863252) Plateletcrit ( 27863252) Refractive error ( 32231278) Subcortical volume (min-P) ( 32665545) Subcortical volume (MOSTest) ( 32665545) White blood cell count ( 32888494)
Interacting Genes		50 interacting genes: AAMP ACTN1 ACTN2 ACTN3 AGPAT3 AP1M1 AP2M1 ARL6IP4 BEND7 C1orf35 CCDC106 CCNL1 CDCA8 CEP70 COIL CT45A1 DRC4 ELOA2 EXOSC5 FAM133A FRMD6 GOLGA8K H2BC15 HMGXB4 KRCC1 MACROH2A1 MAPK8 MCRS1 MKRN3 MYO15B NKAPL NXF1 PRPF3 PRPF40A RBM39 RNF151 RP9 RPS25 S100B SDCBP SDCBP2 SNRNP25 SREK1IP1 STAC3 TAF1A THAP1 TXLNA U2AF2 ZNF317 ZNF41	50 interacting genes: BRCA1 CARD10 CASK CCDC125 CCDC136 CCDC85B CDC5L CEBPA CEP70 CTNNBL1 DPY30 DVL2 DVL3 FAM9B FCHO1 FRA10AC1 GOLGA2 GPRASP2 GTPBP3 HSF2BP LZTS1 MAPRE1 MID2 NACC1 NAV2 NINL NKAP NKAPD1 OSBPL3 PCBP1 PHC2 PIP4K2B PRPF31 PSMD3 RABEP1 RNF151 SART3 SHKBP1 SNIP1 SNRNP200 SSX2IP TRIM39 TSPYL1 TXLNA USP4 WBP4 ZBTB8A ZCCHC10 ZFPM2 ZGPAT
Entrez ID		55216	9129
HPRD ID		07695	07389
Ensembl ID		ENSG00000150776	ENSG00000117360
Uniprot IDs		Q6ZUT1	O43395
PDB IDs			1X4Q 3JCR 5O9Z 6AH0 6AHD 6QW6 6QX9 7N2N 7N2R 7N2S 8H6E 8H6J 8H6K 8H6L 8Q7N 8QO9 8QOZ 8QP8 8QP9 8QPA 8QPB 8QPE 8QXD 8QZS 8R08 8R09 8R0A 8R0B 8RM5 8Y6O
Enriched GO Terms of Interacting Partners?		Pseudopodium RNA Splicing Nuclear Speck Focal Adhesion Assembly Microtubule Cytoskeleton Nucleus RNA Processing Muscle Cell Development Cell-substrate Junction Assembly Cell-substrate Junction Organization MRNA Processing Nucleoplasm MRNA Metabolic Process Identical Protein Binding Nucleic Acid Metabolic Process Sarcomere Cortical Actin Cytoskeleton Clathrin Adaptor Complex RNA Metabolic Process Transmembrane Transporter Binding	RNA Splicing, Via Transesterification Reactions MRNA Splicing, Via Spliceosome Identical Protein Binding RNA Splicing Spliceosomal Complex U2-type Precatalytic Spliceosome Spliceosomal Tri-snRNP Complex Assembly Nucleus MRNA Processing Hematopoietic Stem Cell Proliferation Nucleoplasm Protein Binding U4 SnRNA Binding Positive Regulation Of Neuron Projection Arborization U4/U6 X U5 Tri-snRNP Complex Spliceosomal SnRNP Assembly Protein-RNA Complex Assembly MRNA Metabolic Process Centrosome Cycle Protein Domain Specific Binding RNA Metabolic Process Prp19 Complex RNA Processing Protein Localization To Microtubule Cytoplasm Protein-containing Complex Assembly Regulation Of Neuron Projection Arborization
Tagcloud ?
Tagcloud (Difference) ?
Tagcloud (Intersection) ?