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PLOD1 and USP4
Number of citations of the paper that reports this interaction (PubMedID
23022198
)
0
Data Source:
BioGRID
(two hybrid)
PLOD1
USP4
Description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
ubiquitin specific peptidase 4
Image
No pdb structure
GO Annotations
Cellular Component
Extracellular Space
Endoplasmic Reticulum
Endoplasmic Reticulum Membrane
Golgi Apparatus
Membrane
Rough Endoplasmic Reticulum Membrane
Extracellular Matrix
Extracellular Exosome
Catalytic Complex
Nucleus
Cytoplasm
Lysosome
Cytosol
Molecular Function
Iron Ion Binding
Protein Binding
Procollagen-lysine 5-dioxygenase Activity
Oxidoreductase Activity
Oxidoreductase Activity, Acting On Paired Donors, With Incorporation Or Reduction Of Molecular Oxygen
L-ascorbic Acid Binding
Procollagen Glucosyltransferase Activity
Metal Ion Binding
Dioxygenase Activity
Cysteine-type Deubiquitinase Activity
Protein Binding
Peptidase Activity
Cysteine-type Peptidase Activity
Hydrolase Activity
Adenosine Receptor Binding
Identical Protein Binding
Metal Ion Binding
Biological Process
Response To Hypoxia
Protein O-linked Glycosylation
Epidermis Development
Peptidyl-lysine Hydroxylation
Collagen Fibril Organization
Spliceosomal Tri-snRNP Complex Assembly
Cytoplasmic Translation
Proteolysis
Cellular Response To Starvation
Protein Deubiquitination
Negative Regulation Of Protein Ubiquitination
Regulation Of Protein Stability
Cellular Response To Nutrient Levels
Protein Localization To Cell Surface
TORC1 Signaling
Negative Regulation Of Translational Initiation
Positive Regulation Of Translational Initiation
Negative Regulation Of TORC1 Signaling
Positive Regulation Of TORC1 Signaling
Pathways
Collagen biosynthesis and modifying enzymes
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NF-kappa-B signaling pathway
Ub-specific processing proteases
Drugs
Ascorbic acid
Diseases
Nevo syndrome
Ehlers-Danlos syndrome (EDS), including: EDS classical type (EDS1/2); EDS hypermobility type (EDS3); EDS vascular type (EDS4); EDS kyphoscoliosis type (EDS6); EDS arthrochalasia type (EDS7A/7B); EDS dermatospraxis type (EDS7C); EDS autosomal recessive cardiac valvular form (EDSCV); EDS musculocontractural type (EDSMC); EDS progeroid form (EDSP); Tenascin-X deficiency (TNXD); Brittle cornea syndrome (EDS6B); EDS-like spondylocheiro dysplasia (SCD-EDS)
GWAS
Diastolic blood pressure x alcohol consumption interaction (2df test) (
29912962
)
Moyamoya disease (
29273593
)
Platelet count (
27863252
)
Plateletcrit (
27863252
)
Tuberculosis (
29036319
)
Brain morphology (min-P) (
32665545
)
Brain morphology (MOSTest) (
32665545
)
Cortical surface area (MOSTest) (
32665545
)
Crohn's disease (
28067908
)
Glycated hemoglobin levels (
34059833
28898252
)
High light scatter reticulocyte percentage of red cells (
27863252
)
Household income (MTAG) (
31844048
)
Inflammatory bowel disease (
28067908
23128233
)
Intelligence (MTAG) (
29326435
)
Lymphocyte count (
32888494
)
Mean corpuscular hemoglobin (
32888494
)
Mean corpuscular volume (
32888494
)
Red cell distribution width (
32888494
)
Refractive error (
32231278
)
Reticulocyte count (
27863252
)
Reticulocyte fraction of red cells (
27863252
32888494
)
Sleep duration (short sleep) (
30846698
)
Subcortical volume (min-P) (
32665545
)
Subcortical volume (MOSTest) (
32665545
)
Ulcerative colitis (
28067908
25082827
)
Interacting Genes
41 interacting genes:
MIR1-2
MIR10B
MIR122
MIR128-2
MIR141
MIR143
MIR15A
MIR15B
MIR17
MIR18A
MIR18B
MIR199A2
MIR19A
MIR19B1
MIR206
MIR20A
MIR214
MIR221
MIR222
MIR29B1
MIR34A
MIR34B
MIR363
MIR7-2
MIR7-3
MIR9-1
MIR9-2
MIR98
MIRLET7A1
MIRLET7A2
MIRLET7A3
MIRLET7B
MIRLET7C
MIRLET7D
MIRLET7E
MIRLET7F1
MIRLET7F2
MIRLET7G
MIRLET7I
PDE4B
USP4
49 interacting genes:
AKT1
ANXA7
ASS1
ATP1B1
ATP1B3
BDKRB2
BRAP
CDKN1A
CIAO2B
DLC1
HDAC2
IGKV2D-29
IRF4
LAMA5
LGALS1
MAP3K7
NLK
NOLC1
NPC2
PCNA
PDK1
PGM1
PLA2G2A
PLOD1
PPIA
PRPF3
PSAP
PSMA6
PSMC5
PSMD11
RB1
RBBP8
RBL1
RBL2
RCC1
RHEB
RNPS1
SMAD4
SMN1
TK1
TP53BP2
TRAF2
TRIM21
TRIM54
TRIM55
TRIM63
UBC
USP21
USP28
Entrez ID
5351
7375
HPRD ID
01086
04598
Ensembl ID
ENSG00000083444
ENSG00000114316
Uniprot IDs
Q02809
Q08AK7
Q13107
PDB IDs
2Y6E
5CTR
Enriched GO Terms of Interacting Partners
?
MiRNA-mediated Post-transcriptional Gene Silencing
RISC Complex
Regulatory NcRNA-mediated Post-transcriptional Gene Silencing
Post-transcriptional Gene Silencing
Regulatory NcRNA-mediated Gene Silencing
MRNA Base-pairing Post-transcriptional Repressor Activity
Post-transcriptional Regulation Of Gene Expression
Negative Regulation Of Gene Expression
Negative Regulation Of Macromolecule Biosynthetic Process
Negative Regulation Of Biosynthetic Process
Negative Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Metabolic Process
Extracellular Vesicle
MiRNA-mediated Gene Silencing By MRNA Destabilization
MiRNA-mediated Gene Silencing By Inhibition Of Translation
MRNA 3'-UTR Binding
Regulation Of Gene Expression
Regulation Of Macromolecule Biosynthetic Process
MRNA Destabilization
RNA Destabilization
Positive Regulation Of MRNA Catabolic Process
Regulation Of Macromolecule Metabolic Process
Negative Regulation Of Translation
Positive Regulation Of MRNA Metabolic Process
Negative Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Negative Regulation Of Signal Transduction
Regulation Of Metabolic Process
Negative Regulation Of Cell Communication
Negative Regulation Of Signaling
Regulation Of MRNA Stability
Regulation Of Transforming Growth Factor Beta Receptor Signaling Pathway
Negative Regulation Of Cytokine Production
Regulation Of Cellular Response To Growth Factor Stimulus
Regulation Of RNA Stability
Negative Regulation Of Angiogenesis
Negative Regulation Of Vasculature Development
Negative Regulation Of Cell Migration
Negative Regulation Of Cell Motility
Extracellular Space
Negative Regulation Of Locomotion
Regulation Of Blood Vessel Endothelial Cell Migration
Regulation Of Transmembrane Receptor Protein Serine/threonine Kinase Signaling Pathway
Regulation Of Angiogenesis
Regulation Of MRNA Metabolic Process
Regulation Of Translation
Regulation Of Vasculature Development
Negative Regulation Of Extracellular Matrix Assembly
Positive Regulation Of Tissue Remodeling
Negative Regulation Of Sprouting Angiogenesis
Regulation Of Lipid Kinase Activity
Intracellular Signal Transduction
Nucleoplasm
Regulation Of Phosphorus Metabolic Process
Regulation Of Catalytic Activity
Intracellular Signaling Cassette
Macromolecule Metabolic Process
Extracellular Exosome
PCNA-p21 Complex
Regulation Of Kinase Activity
Intrinsic Apoptotic Signaling Pathway
Positive Regulation Of Intracellular Signal Transduction
Response To Stress
Nucleus
Identical Protein Binding
Intrinsic Apoptotic Signaling Pathway By P53 Class Mediator
Regulation Of Phosphorylation
Positive Regulation Of Catalytic Activity
TORC1 Signaling
Regulation Of Cell Cycle
Apoptotic Signaling Pathway
Negative Regulation Of G1/S Transition Of Mitotic Cell Cycle
Positive Regulation Of Deoxyribonuclease Activity
Negative Regulation Of Cell Cycle G1/S Phase Transition
Negative Regulation Of Cell Cycle Phase Transition
Protein-containing Complex
Cytoplasm
Cytosol
Response To External Biotic Stimulus
Negative Regulation Of Cell Cycle
Signal Transduction
Positive Regulation Of Potassium Ion Import Across Plasma Membrane
Sulfate Binding
Cellular Response To Stress
G1/S Transition Of Mitotic Cell Cycle
Regulation Of G1/S Transition Of Mitotic Cell Cycle
TOR Signaling
Cell Cycle G1/S Phase Transition
Positive Regulation Of Sodium Ion Transport
NF-kappaB Binding
Negative Regulation Of Mitotic Cell Cycle Phase Transition
Regulation Of Potassium Ion Import
Cellular Response To Chemical Stress
Protein Modification Process
Negative Regulation Of Cell Cycle Process
Epithelial Cell Differentiation
DNA-binding Transcription Factor Binding
Positive Regulation Of Interleukin-2 Production
Cell Differentiation
Regulation Of Cell Cycle G1/S Phase Transition
Tagcloud
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Tagcloud (Difference)
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Tagcloud (Intersection)
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